RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 USP42Q9H9J4 1324 aaKnown RBP12.01□□□□□ -0.49
USP6NL-202ENST00000379237 ARHGEF10O15013 1369 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 NRXN1Q9ULB1 1477 aa12.01□□□□□ -0.49
USP6NL-202ENST00000379237 SAMD9LQ8IVG5 1584 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 CCDC169A6NNP5 214 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 OPHN1O60890 802 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 PPFIA2O75334 1257 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 ABCD1P33897 745 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 SERPINB4P48594 390 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 KIF11P52732 1056 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 DEUP1Q05D60 604 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 NR5A1Q13285 461 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 QPCTQ16769 361 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 HAUS3Q68CZ6 603 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 CRELD2Q6UXH1 353 aaPredicted RBP12□□□□□ -0.49
USP6NL-202ENST00000379237 NUDCD1Q96RS6 583 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 HPSEQ9Y251 543 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 PTPREP23469 700 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 ASIC1P78348 528 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 MAIP1Q8WWC4 291 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 ZKSCAN3Q9BRR0 538 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 AP1M1Q9BXS5 423 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 NKIRAS1Q9NYS0 192 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 INTUQ9ULD6 942 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 ITIH6Q6UXX5 1313 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 RTN2O75298 545 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 FGFR1OPO95684 399 aaKnown RBP12□□□□□ -0.49
USP6NL-202ENST00000379237 PDE6CP51160 858 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 NLRP5P59047 1200 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 USPL1Q5W0Q7 1092 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 BICDL1Q6ZP65 573 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 FAM47EQ6ZV65 393 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 SDCCAG8Q86SQ7 713 aaPredicted RBP12□□□□□ -0.49
USP6NL-202ENST00000379237 CAVIN3Q969G5 261 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 MTRF1LQ9UGC7 380 aaKnown RBP12□□□□□ -0.49
USP6NL-202ENST00000379237 PLCH2O75038 1416 aa12□□□□□ -0.49
USP6NL-202ENST00000379237 GLI1P08151 1106 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 STX2P32856 288 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 IGHMBP2P38935 993 aaKnown RBP11.99□□□□□ -0.49
USP6NL-202ENST00000379237 MSH2P43246 934 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 RCN2Q14257 317 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 USP49Q70CQ1 688 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 ARMCX6Q7L4S7 300 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 ERICH1Q86X53 443 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 PROCA1Q8NCQ7 364 aaPredicted RBP11.99□□□□□ -0.49
USP6NL-202ENST00000379237 GORASP1Q9BQQ3 440 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 RNF14Q9UBS8 474 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 RWDD2AQ9UIY3 292 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 PNMA2Q9UL42 364 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 MED23Q9ULK4 1368 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 BICDL2A1A5D9 508 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 TRAPPC3O43617 180 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 EXOSC10Q01780 885 aaKnown RBP11.99□□□□□ -0.49
USP6NL-202ENST00000379237 GRIN1Q05586 938 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 RAPGEF1Q13905 1077 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 WTAPQ15007 396 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 TTC5Q8N0Z6 440 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 MCUR1Q96AQ8 359 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 CTTNBP2NLQ9P2B4 639 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 ASXL2Q76L83 1435 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 ANKRD62A6NC57 917 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 TRIM49BA6NDI0 452 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 GHRP10912 638 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 CHN1P15882 459 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 HERVK_113P62684 666 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 ZBTB16Q05516 673 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 SLC9C1Q4G0N8 1177 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 C6orf163Q5TEZ5 329 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 ZNF449Q6P9G9 518 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 TMBIM4Q9HC24 238 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 AGPAT5Q9NUQ2 364 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 PACSIN2Q9UNF0 486 aaPredicted RBP11.99□□□□□ -0.49
USP6NL-202ENST00000379237 ADAMTS12P58397 1594 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 FGAP02671 866 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 ALDH5A1P51649 535 aaPredicted RBP11.99□□□□□ -0.49
USP6NL-202ENST00000379237 CDC37Q16543 378 aaPredicted RBP11.99□□□□□ -0.49
USP6NL-202ENST00000379237 ADAT2Q7Z6V5 191 aaKnown RBP11.99□□□□□ -0.49
USP6NL-202ENST00000379237 HAUS7Q99871 368 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 MLXIPLQ9NP71 852 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 RASAL2Q9UJF2 1139 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 GDAQ9Y2T3 454 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 SLC4A4Q9Y6R1 1079 aa11.99□□□□□ -0.49
USP6NL-202ENST00000379237 MAP3K4Q9Y6R4 1608 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 MGRN1O60291 552 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 SMNDC1O75940 238 aaKnown RBP eCLIP11.98□□□□□ -0.49
USP6NL-202ENST00000379237 UBOX5O94941 541 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 FESP07332 822 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 LMBR1LQ6UX01 489 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 DDX42Q86XP3 938 aaKnown RBP eCLIP11.98□□□□□ -0.49
USP6NL-202ENST00000379237 TATDN2Q93075 761 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 DYDC2Q96IM9 177 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 LARSQ9P2J5 1176 aaKnown RBP11.98□□□□□ -0.49
USP6NL-202ENST00000379237 CFAP65Q6ZU64 1925 aaKnown RBP11.98□□□□□ -0.49
USP6NL-202ENST00000379237 UNC13BO14795 1591 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 UBN2Q6ZU65 1347 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 hCG_1642624A0A1W2PR95 340 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 HSD17B3P37058 310 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 RASSF2P50749 326 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 LRRC14Q15048 493 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 CFAP157Q5JU67 520 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms