RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 ZNF341Q9BYN7 854 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 RIC8AQ9NPQ8 531 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 ERVV-1B6SEH8 477 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 M0R2C6 588 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 SREBF2Q12772 1141 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 CACTINQ8WUQ7 758 aaKnown RBP11.97□□□□□ -0.49
LINC00654-201ENST00000379053 RBSNQ9H1K0 784 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 COPRSQ9NQ92 184 aa11.97□□□□□ -0.49
LINC00654-201ENST00000379053 NFX1Q12986 1120 aaKnown RBP11.96□□□□□ -0.49
LINC00654-201ENST00000379053 MAP7Q14244 749 aa11.96□□□□□ -0.49
LINC00654-201ENST00000379053 DIXDC1Q155Q3 683 aa11.96□□□□□ -0.49
LINC00654-201ENST00000379053 MTERF2Q49AM1 385 aa11.96□□□□□ -0.49
LINC00654-201ENST00000379053 CFAP221Q4G0U5 840 aa11.96□□□□□ -0.49
LINC00654-201ENST00000379053 NLRP10Q86W26 655 aa11.96□□□□□ -0.49
LINC00654-201ENST00000379053 FAM49AQ9H0Q0 323 aaPredicted RBP11.96□□□□□ -0.49
LINC00654-201ENST00000379053 BTBD18B2RXH4 712 aa11.96□□□□□ -0.49
LINC00654-201ENST00000379053 PTPRTO14522 1441 aa11.96□□□□□ -0.49
LINC00654-201ENST00000379053 ANXA13P27216 316 aa11.96□□□□□ -0.49
LINC00654-201ENST00000379053 GKAP1Q5VSY0 366 aaPredicted RBP11.96□□□□□ -0.49
LINC00654-201ENST00000379053 MFSD14CQ5VZR4 134 aa11.96□□□□□ -0.49
LINC00654-201ENST00000379053 HDXQ7Z353 690 aa11.96□□□□□ -0.49
LINC00654-201ENST00000379053 KRT12Q99456 494 aa11.96□□□□□ -0.49
LINC00654-201ENST00000379053 IRAK4Q9NWZ3 460 aa11.96□□□□□ -0.49
LINC00654-201ENST00000379053 CPSF3Q9UKF6 684 aaKnown RBP11.96□□□□□ -0.49
LINC00654-201ENST00000379053 NR2E3Q9Y5X4 410 aa11.96□□□□□ -0.49
LINC00654-201ENST00000379053 NLRP1Q9C000 1473 aa11.96□□□□□ -0.49
LINC00654-201ENST00000379053 METP08581 1390 aa11.96□□□□□ -0.49
LINC00654-201ENST00000379053 PTK2Q05397 1052 aa11.96□□□□□ -0.5
LINC00654-201ENST00000379053 GPR101Q96P66 508 aaPredicted RBP11.96□□□□□ -0.5
LINC00654-201ENST00000379053 ANAPC5Q9UJX4 755 aa11.96□□□□□ -0.5
LINC00654-201ENST00000379053 PCDHB4Q9Y5E5 795 aa11.96□□□□□ -0.5
LINC00654-201ENST00000379053 KCNJ18B7U540 433 aa11.96□□□□□ -0.5
LINC00654-201ENST00000379053 KCNJ12Q14500 433 aa11.96□□□□□ -0.5
LINC00654-201ENST00000379053 ME3Q16798 604 aa11.96□□□□□ -0.5
LINC00654-201ENST00000379053 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.96□□□□□ -0.5
LINC00654-201ENST00000379053 FAM160B2Q86V87 743 aa11.96□□□□□ -0.5
LINC00654-201ENST00000379053 IPO11Q9UI26 975 aaKnown RBP11.96□□□□□ -0.5
LINC00654-201ENST00000379053 SRGAP2BP0DMP2 458 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 KRT10P13645 584 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 TFAMQ00059 246 aaKnown RBP11.95□□□□□ -0.5
LINC00654-201ENST00000379053 MTX1Q13505 466 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 CROCCP2Q86T23 111 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 PPFIBP2Q8ND30 876 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 SLC16A10Q8TF71 515 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 SLC8A2Q9UPR5 921 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 ATP8B3O60423 1300 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 RPS6KA4O75676 772 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 PFKFB1P16118 471 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 PTH1RQ03431 593 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 MAP7D3Q8IWC1 876 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 PI4K2BQ8TCG2 481 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 PPP4R1Q8TF05 950 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 NT5C1BQ96P26 610 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 NEDD9Q14511 834 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 MICALL1Q8N3F8 863 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 C7orf31Q8N865 590 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 ERBB3P21860 1342 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 UBN2Q6ZU65 1347 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 SEC24BO95487 1268 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 PTGDRQ13258 359 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 TUBB2AQ13885 445 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 MORC3Q14149 939 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 PRPSAP1Q14558 356 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 RINT1Q6NUQ1 792 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 PDXDC2PQ6P474 469 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 PNMA8AQ86V59 439 aaPredicted RBP11.95□□□□□ -0.5
LINC00654-201ENST00000379053 FOXP4Q8IVH2 680 aaPredicted RBP11.95□□□□□ -0.5
LINC00654-201ENST00000379053 PGBD1Q96JS3 809 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 PIGSQ96S52 555 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 TUBB2BQ9BVA1 445 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 HACL1Q9UJ83 578 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 ASNSP08243 561 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 GSTA1P08263 222 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 GSTA2P09210 222 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 SAT1P21673 171 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 BPIFB4P59827 614 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 RC3H1Q5TC82 1133 aaKnown RBP11.95□□□□□ -0.5
LINC00654-201ENST00000379053 UGGT1Q9NYU2 1555 aa11.95□□□□□ -0.5
LINC00654-201ENST00000379053 PSAPP07602 524 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 EIF2AK2P19525 551 aaKnown RBP11.94□□□□□ -0.5
LINC00654-201ENST00000379053 MARK3P27448 753 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 OSTNP61366 133 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 CEP85LQ5SZL2 805 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 DPF3Q92784 378 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 P3H4Q92791 437 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 CBX8Q9HC52 389 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 EFCAB6Q5THR3 1501 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 LONP1P36776 959 aaKnown RBP11.94□□□□□ -0.5
LINC00654-201ENST00000379053 MYL7Q01449 175 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 TAB3Q8N5C8 712 aaPredicted RBP11.94□□□□□ -0.5
LINC00654-201ENST00000379053 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.94□□□□□ -0.5
LINC00654-201ENST00000379053 CHMP6Q96FZ7 201 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 GPR108Q9NPR9 543 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 PFKFB2O60825 505 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 VPS41P49754 854 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 ZNF131P52739 623 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 MFAP3P55082 362 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 POLR2FP61218 127 aaKnown RBP11.94□□□□□ -0.5
LINC00654-201ENST00000379053 BRINP3Q76B58 766 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 TTC30AQ86WT1 665 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms