RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 RCSD1Q6JBY9 416 aa21.06■□□□□ 0.96
PDLIM4-202ENST00000379018 ALDH8A1Q9H2A2 487 aaPredicted RBP21.06■□□□□ 0.96
PDLIM4-202ENST00000379018 NCOR1O75376 2440 aa21.06■□□□□ 0.96
PDLIM4-202ENST00000379018 PTPDC1A2A3K4 754 aa21.05■□□□□ 0.96
PDLIM4-202ENST00000379018 RFXAPO00287 272 aa21.05■□□□□ 0.96
PDLIM4-202ENST00000379018 RANBP6O60518 1105 aaKnown RBP21.05■□□□□ 0.96
PDLIM4-202ENST00000379018 SLC16A2P36021 539 aa21.05■□□□□ 0.96
PDLIM4-202ENST00000379018 TFF2Q03403 129 aa21.05■□□□□ 0.96
PDLIM4-202ENST00000379018 VTA1Q9NP79 307 aa21.05■□□□□ 0.96
PDLIM4-202ENST00000379018 BAATQ14032 418 aaPredicted RBP21.04■□□□□ 0.96
PDLIM4-202ENST00000379018 TTBK2Q6IQ55 1244 aa21.04■□□□□ 0.96
PDLIM4-202ENST00000379018 DCTPP1Q9H773 170 aa21.04■□□□□ 0.96
PDLIM4-202ENST00000379018 IL17RBQ9NRM6 502 aa21.04■□□□□ 0.96
PDLIM4-202ENST00000379018 TOMM22Q9NS69 142 aa21.04■□□□□ 0.96
PDLIM4-202ENST00000379018 PCDHA11Q9Y5I1 949 aa21.04■□□□□ 0.96
PDLIM4-202ENST00000379018 TNKSO95271 1327 aa21.04■□□□□ 0.96
PDLIM4-202ENST00000379018 ALDH5A1P51649 535 aaPredicted RBP21.03■□□□□ 0.96
PDLIM4-202ENST00000379018 CHMP4BP1P59074 171 aa21.03■□□□□ 0.96
PDLIM4-202ENST00000379018 PPP4R3BQ5MIZ7 849 aa21.03■□□□□ 0.96
PDLIM4-202ENST00000379018 OR6J1Q8NGC5 347 aa21.03■□□□□ 0.96
PDLIM4-202ENST00000379018 OTUD7AQ8TE49 926 aaPredicted RBP21.03■□□□□ 0.96
PDLIM4-202ENST00000379018 WDR11Q9BZH6 1224 aa21.03■□□□□ 0.96
PDLIM4-202ENST00000379018 GPHNQ9NQX3 736 aaPredicted RBP21.03■□□□□ 0.96
PDLIM4-202ENST00000379018 FRMPD2Q68DX3 1309 aaPredicted RBP21.03■□□□□ 0.96
PDLIM4-202ENST00000379018 PRRC2BQ5JSZ5 2229 aaKnown RBP21.02■□□□□ 0.96
PDLIM4-202ENST00000379018 NFIBO00712 420 aa21.02■□□□□ 0.96
PDLIM4-202ENST00000379018 ERC2O15083 957 aa21.02■□□□□ 0.96
PDLIM4-202ENST00000379018 PLA2G6O60733 806 aa21.02■□□□□ 0.96
PDLIM4-202ENST00000379018 ICAM1P05362 532 aa21.02■□□□□ 0.96
PDLIM4-202ENST00000379018 CA3P07451 260 aa21.02■□□□□ 0.96
PDLIM4-202ENST00000379018 CALML3P27482 149 aa21.02■□□□□ 0.96
PDLIM4-202ENST00000379018 DUSP28Q4G0W2 176 aa21.02■□□□□ 0.96
PDLIM4-202ENST00000379018 TMEM67Q5HYA8 995 aa21.02■□□□□ 0.96
PDLIM4-202ENST00000379018 ZMYM1Q5SVZ6 1142 aa21.02■□□□□ 0.96
PDLIM4-202ENST00000379018 SEZ6LQ9BYH1 1024 aa21.02■□□□□ 0.96
PDLIM4-202ENST00000379018 GPCPD1Q9NPB8 672 aa21.02■□□□□ 0.96
PDLIM4-202ENST00000379018 POLR3EQ9NVU0 708 aa21.02■□□□□ 0.96
PDLIM4-202ENST00000379018 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.02■□□□□ 0.96
PDLIM4-202ENST00000379018 Q9Y3F1 56 aa21.02■□□□□ 0.96
PDLIM4-202ENST00000379018 SUPT20HL2P0C7V6 817 aa21.01■□□□□ 0.95
PDLIM4-202ENST00000379018 KCNQ1P51787 676 aa21.01■□□□□ 0.95
PDLIM4-202ENST00000379018 PURAQ00577 322 aaKnown RBP21.01■□□□□ 0.95
PDLIM4-202ENST00000379018 RRP12Q5JTH9 1297 aaKnown RBP21.01■□□□□ 0.95
PDLIM4-202ENST00000379018 DIEXFQ68CQ4 756 aaKnown RBP21.01■□□□□ 0.95
PDLIM4-202ENST00000379018 VWCEQ96DN2 955 aa21.01■□□□□ 0.95
PDLIM4-202ENST00000379018 ADD3Q9UEY8 706 aaKnown RBP21.01■□□□□ 0.95
PDLIM4-202ENST00000379018 REV3LO60673 3130 aa21.01■□□□□ 0.95
PDLIM4-202ENST00000379018 GTPBP6O43824 516 aaPredicted RBP21■□□□□ 0.95
PDLIM4-202ENST00000379018 CPT1AP50416 773 aa21■□□□□ 0.95
PDLIM4-202ENST00000379018 SYDE2Q5VT97 1194 aa21■□□□□ 0.95
PDLIM4-202ENST00000379018 KRT40Q6A162 431 aa21■□□□□ 0.95
PDLIM4-202ENST00000379018 SLC30A10Q6XR72 485 aa21■□□□□ 0.95
PDLIM4-202ENST00000379018 PI4K2BQ8TCG2 481 aa21■□□□□ 0.95
PDLIM4-202ENST00000379018 MTG1Q9BT17 334 aaPredicted RBP21■□□□□ 0.95
PDLIM4-202ENST00000379018 FTOQ9C0B1 505 aaKnown RBP eCLIP21■□□□□ 0.95
PDLIM4-202ENST00000379018 RANBP17Q9H2T7 1088 aaKnown RBP21■□□□□ 0.95
PDLIM4-202ENST00000379018 TTC41PQ6P2S7 1318 aa21■□□□□ 0.95
PDLIM4-202ENST00000379018 ACTN1P12814 892 aa20.99■□□□□ 0.95
PDLIM4-202ENST00000379018 NBPF20Q3BBV1 942 aa20.99■□□□□ 0.95
PDLIM4-202ENST00000379018 MORC4Q8TE76 937 aa20.99■□□□□ 0.95
PDLIM4-202ENST00000379018 DCAF4Q8WV16 495 aa20.99■□□□□ 0.95
PDLIM4-202ENST00000379018 ARNTL2Q8WYA1 636 aa20.99■□□□□ 0.95
PDLIM4-202ENST00000379018 COPS5Q92905 334 aa20.99■□□□□ 0.95
PDLIM4-202ENST00000379018 EPOPA6NHQ4 379 aa20.98■□□□□ 0.95
PDLIM4-202ENST00000379018 FOXP2O15409 715 aa20.98■□□□□ 0.95
PDLIM4-202ENST00000379018 PFKMP08237 780 aa20.98■□□□□ 0.95
PDLIM4-202ENST00000379018 PDE4DQ08499 809 aa20.98■□□□□ 0.95
PDLIM4-202ENST00000379018 PPP2R5BQ15173 497 aa20.98■□□□□ 0.95
PDLIM4-202ENST00000379018 VPS53Q5VIR6 699 aa20.98■□□□□ 0.95
PDLIM4-202ENST00000379018 NOD1Q9Y239 953 aa20.98■□□□□ 0.95
PDLIM4-202ENST00000379018 AAK1Q2M2I8 961 aa20.97■□□□□ 0.95
PDLIM4-202ENST00000379018 BRDTQ58F21 947 aaPredicted RBP20.97■□□□□ 0.95
PDLIM4-202ENST00000379018 RETREG2Q8NC44 543 aa20.97■□□□□ 0.95
PDLIM4-202ENST00000379018 MTCH2Q9Y6C9 303 aa20.97■□□□□ 0.95
PDLIM4-202ENST00000379018 RAD50Q92878 1312 aa20.97■□□□□ 0.95
PDLIM4-202ENST00000379018 SCN10AQ9Y5Y9 1956 aa20.96■□□□□ 0.95
PDLIM4-202ENST00000379018 ARHGEF15O94989 841 aa20.96■□□□□ 0.95
PDLIM4-202ENST00000379018 BMP1P13497 986 aa20.96■□□□□ 0.95
PDLIM4-202ENST00000379018 RNF207Q6ZRF8 634 aa20.96■□□□□ 0.95
PDLIM4-202ENST00000379018 TANC1Q9C0D5 1861 aa20.96■□□□□ 0.95
PDLIM4-202ENST00000379018 BDP1A6H8Y1 2624 aa20.95■□□□□ 0.94
PDLIM4-202ENST00000379018 TET1Q8NFU7 2136 aa20.95■□□□□ 0.94
PDLIM4-202ENST00000379018 MX1P20591 662 aa20.95■□□□□ 0.94
PDLIM4-202ENST00000379018 FAM122AQ96E09 287 aa20.95■□□□□ 0.94
PDLIM4-202ENST00000379018 SLC9A7Q96T83 725 aa20.95■□□□□ 0.94
PDLIM4-202ENST00000379018 TMEM47Q9BQJ4 181 aa20.95■□□□□ 0.94
PDLIM4-202ENST00000379018 TRIP12Q14669 1992 aaPredicted RBP20.95■□□□□ 0.94
PDLIM4-202ENST00000379018 TOP1P11387 765 aaKnown RBP20.94■□□□□ 0.94
PDLIM4-202ENST00000379018 CLEC4DQ8WXI8 215 aa20.94■□□□□ 0.94
PDLIM4-202ENST00000379018 RBM47A0AV96 593 aaKnown RBP20.93■□□□□ 0.94
PDLIM4-202ENST00000379018 KIF28PB7ZC32 967 aa20.93■□□□□ 0.94
PDLIM4-202ENST00000379018 IQCF3P0C7M6 154 aa20.93■□□□□ 0.94
PDLIM4-202ENST00000379018 TXNP10599 105 aaKnown RBP20.93■□□□□ 0.94
PDLIM4-202ENST00000379018 RFC2P35250 354 aa20.93■□□□□ 0.94
PDLIM4-202ENST00000379018 RPS6P62753 249 aaKnown RBP20.93■□□□□ 0.94
PDLIM4-202ENST00000379018 TAP1Q03518 808 aa20.93■□□□□ 0.94
PDLIM4-202ENST00000379018 USH1GQ495M9 461 aa20.93■□□□□ 0.94
PDLIM4-202ENST00000379018 BTNL9Q6UXG8 535 aa20.93■□□□□ 0.94
PDLIM4-202ENST00000379018 SPRED2Q7Z698 418 aa20.93■□□□□ 0.94
PDLIM4-202ENST00000379018 HERC6Q8IVU3 1022 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms