RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 RAB21Q9UL25 225 aa21.84■■□□□ 1.09
SHROOM1-202ENST00000378676 ERICH4A6NGS2 130 aa21.83■■□□□ 1.09
SHROOM1-202ENST00000378676 NCAPH2Q6IBW4 605 aa21.83■■□□□ 1.09
SHROOM1-202ENST00000378676 REXO1Q8N1G1 1221 aaKnown RBP21.83■■□□□ 1.09
SHROOM1-202ENST00000378676 GGA1Q9UJY5 639 aa21.83■■□□□ 1.09
SHROOM1-202ENST00000378676 RHOXF2BP0C7M4 288 aa21.83■■□□□ 1.08
SHROOM1-202ENST00000378676 ATP2B4P23634 1241 aa21.83■■□□□ 1.08
SHROOM1-202ENST00000378676 NOVP48745 357 aa21.83■■□□□ 1.08
SHROOM1-202ENST00000378676 MEA1Q16626 185 aa21.83■■□□□ 1.08
SHROOM1-202ENST00000378676 MIIPQ5JXC2 388 aa21.83■■□□□ 1.08
SHROOM1-202ENST00000378676 SEPT12Q8IYM1 358 aa21.83■■□□□ 1.08
SHROOM1-202ENST00000378676 RHOXF2Q9BQY4 288 aa21.83■■□□□ 1.08
SHROOM1-202ENST00000378676 MYO6Q9UM54 1294 aa21.83■■□□□ 1.08
SHROOM1-202ENST00000378676 LRRC37AA6NMS7 1700 aa21.83■■□□□ 1.08
SHROOM1-202ENST00000378676 GAKO14976 1311 aa21.83■■□□□ 1.08
SHROOM1-202ENST00000378676 MYH4Q9Y623 1939 aa21.82■■□□□ 1.08
SHROOM1-202ENST00000378676 FAM193AP78312 1265 aa21.82■■□□□ 1.08
SHROOM1-202ENST00000378676 CERS3Q8IU89 383 aa21.82■■□□□ 1.08
SHROOM1-202ENST00000378676 NOA1Q8NC60 698 aaKnown RBP21.82■■□□□ 1.08
SHROOM1-202ENST00000378676 EDIL3O43854 480 aa21.82■■□□□ 1.08
SHROOM1-202ENST00000378676 TXKP42681 527 aa21.82■■□□□ 1.08
SHROOM1-202ENST00000378676 GRB10Q13322 594 aa21.82■■□□□ 1.08
SHROOM1-202ENST00000378676 CRY2Q49AN0 593 aa21.82■■□□□ 1.08
SHROOM1-202ENST00000378676 BEND6Q5SZJ8 279 aaPredicted RBP21.82■■□□□ 1.08
SHROOM1-202ENST00000378676 CLEC10AQ8IUN9 316 aa21.82■■□□□ 1.08
SHROOM1-202ENST00000378676 COA7Q96BR5 231 aa21.82■■□□□ 1.08
SHROOM1-202ENST00000378676 RIOX1Q9H6W3 641 aa21.82■■□□□ 1.08
SHROOM1-202ENST00000378676 BLOC1S4Q9NUP1 217 aa21.82■■□□□ 1.08
SHROOM1-202ENST00000378676 BICDL2A1A5D9 508 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 CTAGE15A4D2H0 777 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 MAP2K7O14733 419 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 SLC37A4O43826 429 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 CTAGE8P0CG41 777 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 PDHBP11177 359 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 PLCG2P16885 1265 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 CYP2C19P33261 490 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 CTAGE6Q86UF2 777 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 CTAGE4Q8IX94 777 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 LRRC47Q8N1G4 583 aaKnown RBP21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 CCDC47Q96A33 483 aaKnown RBP21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 PNMA5Q96PV4 448 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 HAUS4Q9H6D7 363 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 LRRC4BQ9NT99 713 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 HDAC6Q9UBN7 1215 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 POLLQ9UGP5 575 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 ESYT2A0FGR8 921 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 H3BQF6 201 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 ENC1O14682 589 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 SMARCA1P28370 1054 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 MTIF2P46199 727 aaKnown RBP21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 VSNL1P62760 191 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 TBC1D8BQ0IIM8 1120 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 SEMA6BQ9H3T3 888 aa21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.81■■□□□ 1.08
SHROOM1-202ENST00000378676 RCCD1A6NED2 376 aa21.8■■□□□ 1.08
SHROOM1-202ENST00000378676 POTEB2H3BUK9 544 aa21.8■■□□□ 1.08
SHROOM1-202ENST00000378676 TDP2O95551 362 aa21.8■■□□□ 1.08
SHROOM1-202ENST00000378676 TRIM21P19474 475 aaKnown RBP21.8■■□□□ 1.08
SHROOM1-202ENST00000378676 TRAPPC11Q7Z392 1133 aa21.8■■□□□ 1.08
SHROOM1-202ENST00000378676 HNRNPLLQ8WVV9 542 aaKnown RBP21.8■■□□□ 1.08
SHROOM1-202ENST00000378676 BBXQ8WY36 941 aaPredicted RBP21.8■■□□□ 1.08
SHROOM1-202ENST00000378676 FAM163AQ96GL9 167 aaPredicted RBP21.8■■□□□ 1.08
SHROOM1-202ENST00000378676 MTMR9Q96QG7 549 aa21.8■■□□□ 1.08
SHROOM1-202ENST00000378676 SLC39A2Q9NP94 309 aa21.8■■□□□ 1.08
SHROOM1-202ENST00000378676 PLIN4Q96Q06 1357 aa21.8■■□□□ 1.08
SHROOM1-202ENST00000378676 PSMD14O00487 310 aa21.8■■□□□ 1.08
SHROOM1-202ENST00000378676 MCM6Q14566 821 aa21.8■■□□□ 1.08
SHROOM1-202ENST00000378676 CCDC122Q5T0U0 273 aa21.8■■□□□ 1.08
SHROOM1-202ENST00000378676 CALML4Q96GE6 196 aa21.8■■□□□ 1.08
SHROOM1-202ENST00000378676 SUGCTQ9HAC7 445 aa21.8■■□□□ 1.08
SHROOM1-202ENST00000378676 DAGLAQ9Y4D2 1042 aa21.8■■□□□ 1.08
SHROOM1-202ENST00000378676 QSER1Q2KHR3 1735 aa21.79■■□□□ 1.08
SHROOM1-202ENST00000378676 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.79■■□□□ 1.08
SHROOM1-202ENST00000378676 MYMKA6NI61 221 aa21.79■■□□□ 1.08
SHROOM1-202ENST00000378676 ATP1A1P05023 1023 aaKnown RBP21.79■■□□□ 1.08
SHROOM1-202ENST00000378676 EIF6P56537 245 aaKnown RBP21.79■■□□□ 1.08
SHROOM1-202ENST00000378676 TSR1Q2NL82 804 aaKnown RBP21.79■■□□□ 1.08
SHROOM1-202ENST00000378676 TBC1D16Q8TBP0 767 aa21.79■■□□□ 1.08
SHROOM1-202ENST00000378676 NOC4LQ9BVI4 516 aaKnown RBP21.79■■□□□ 1.08
SHROOM1-202ENST00000378676 ABCB6Q9NP58 842 aa21.79■■□□□ 1.08
SHROOM1-202ENST00000378676 AKR1B1P15121 316 aa21.79■■□□□ 1.08
SHROOM1-202ENST00000378676 ST5P78524 1137 aa21.79■■□□□ 1.08
SHROOM1-202ENST00000378676 PICALMQ13492 652 aa21.79■■□□□ 1.08
SHROOM1-202ENST00000378676 CALCRLQ16602 461 aa21.79■■□□□ 1.08
SHROOM1-202ENST00000378676 CNNM4Q6P4Q7 775 aa21.79■■□□□ 1.08
SHROOM1-202ENST00000378676 FAM114A1Q8IWE2 563 aa21.79■■□□□ 1.08
SHROOM1-202ENST00000378676 ZSCAN29Q8IWY8 852 aaPredicted RBP21.79■■□□□ 1.08
SHROOM1-202ENST00000378676 POTEMA6NI47 508 aa21.78■■□□□ 1.08
SHROOM1-202ENST00000378676 ZBED6P86452 979 aa21.78■■□□□ 1.08
SHROOM1-202ENST00000378676 JAKMIP2Q96AA8 810 aa21.78■■□□□ 1.08
SHROOM1-202ENST00000378676 PCMTD1Q96MG8 357 aaPredicted RBP21.78■■□□□ 1.08
SHROOM1-202ENST00000378676 LACRTQ9GZZ8 138 aa21.78■■□□□ 1.08
SHROOM1-202ENST00000378676 NHEJ1Q9H9Q4 299 aaPredicted RBP21.78■■□□□ 1.08
SHROOM1-202ENST00000378676 MTMR4Q9NYA4 1195 aa21.78■■□□□ 1.08
SHROOM1-202ENST00000378676 LRWD1Q9UFC0 647 aa21.78■■□□□ 1.08
SHROOM1-202ENST00000378676 GREB1LQ9C091 1923 aaPredicted RBP21.78■■□□□ 1.08
SHROOM1-202ENST00000378676 GYS1P13807 737 aa21.77■■□□□ 1.08
SHROOM1-202ENST00000378676 ADCY7P51828 1080 aa21.77■■□□□ 1.08
SHROOM1-202ENST00000378676 AMPD3Q01432 767 aa21.77■■□□□ 1.08
SHROOM1-202ENST00000378676 ORC2Q13416 577 aaPredicted RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms