RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 SLC1A4P43007 532 aa21.6■■□□□ 1.05
PCDHA4-201ENST00000378125 GRB10Q13322 594 aa21.6■■□□□ 1.05
PCDHA4-201ENST00000378125 MCM6Q14566 821 aa21.6■■□□□ 1.05
PCDHA4-201ENST00000378125 AEBP2Q6ZN18 517 aaPredicted RBP21.6■■□□□ 1.05
PCDHA4-201ENST00000378125 EXOC1Q9NV70 894 aa21.6■■□□□ 1.05
PCDHA4-201ENST00000378125 URI1O94763 535 aaPredicted RBP21.59■■□□□ 1.05
PCDHA4-201ENST00000378125 ELF2Q15723 593 aa21.59■■□□□ 1.05
PCDHA4-201ENST00000378125 GPATCH4Q5T3I0 446 aaKnown RBP21.59■■□□□ 1.05
PCDHA4-201ENST00000378125 DYMQ7RTS9 669 aa21.59■■□□□ 1.05
PCDHA4-201ENST00000378125 CUL5Q93034 780 aa21.59■■□□□ 1.05
PCDHA4-201ENST00000378125 PANX2Q96RD6 677 aa21.59■■□□□ 1.05
PCDHA4-201ENST00000378125 PSTPIP2Q9H939 334 aa21.59■■□□□ 1.05
PCDHA4-201ENST00000378125 MRPL44Q9H9J2 332 aaKnown RBP21.59■■□□□ 1.05
PCDHA4-201ENST00000378125 PI4KBQ9UBF8 816 aa21.59■■□□□ 1.05
PCDHA4-201ENST00000378125 H7C1D1 291 aa21.58■■□□□ 1.05
PCDHA4-201ENST00000378125 PSMA7O14818 248 aa21.58■■□□□ 1.05
PCDHA4-201ENST00000378125 GNG11P61952 73 aa21.58■■□□□ 1.05
PCDHA4-201ENST00000378125 STIM1Q13586 685 aa21.58■■□□□ 1.05
PCDHA4-201ENST00000378125 PNMA5Q96PV4 448 aa21.58■■□□□ 1.05
PCDHA4-201ENST00000378125 WDR24Q96S15 920 aa21.58■■□□□ 1.05
PCDHA4-201ENST00000378125 IRX2Q9BZI1 471 aaPredicted RBP21.58■■□□□ 1.05
PCDHA4-201ENST00000378125 EHD4Q9H223 541 aa21.58■■□□□ 1.05
PCDHA4-201ENST00000378125 LZTFL1Q9NQ48 299 aa21.58■■□□□ 1.05
PCDHA4-201ENST00000378125 MYO3BQ8WXR4 1341 aa21.58■■□□□ 1.05
PCDHA4-201ENST00000378125 LRRC10BA6NIK2 292 aa21.58■■□□□ 1.04
PCDHA4-201ENST00000378125 TAL1P17542 331 aaPredicted RBP21.58■■□□□ 1.04
PCDHA4-201ENST00000378125 SPAG1Q07617 926 aa21.58■■□□□ 1.04
PCDHA4-201ENST00000378125 SLFN13Q68D06 897 aa21.58■■□□□ 1.04
PCDHA4-201ENST00000378125 STYK1Q6J9G0 422 aa21.58■■□□□ 1.04
PCDHA4-201ENST00000378125 CDK5RAP3Q96JB5 506 aa21.58■■□□□ 1.04
PCDHA4-201ENST00000378125 SLC39A2Q9NP94 309 aa21.58■■□□□ 1.04
PCDHA4-201ENST00000378125 MARCH6O60337 910 aa21.57■■□□□ 1.04
PCDHA4-201ENST00000378125 TMEM266Q2M3C6 531 aa21.57■■□□□ 1.04
PCDHA4-201ENST00000378125 QRICH1Q2TAL8 776 aa21.57■■□□□ 1.04
PCDHA4-201ENST00000378125 ERO1AQ96HE7 468 aa21.57■■□□□ 1.04
PCDHA4-201ENST00000378125 CCDC17Q96LX7 622 aa21.57■■□□□ 1.04
PCDHA4-201ENST00000378125 DHX36Q9H2U1 1008 aaKnown RBP21.57■■□□□ 1.04
PCDHA4-201ENST00000378125 CUEDC2Q9H467 287 aa21.57■■□□□ 1.04
PCDHA4-201ENST00000378125 BLOC1S4Q9NUP1 217 aa21.57■■□□□ 1.04
PCDHA4-201ENST00000378125 DDX25Q9UHL0 483 aaKnown RBP21.57■■□□□ 1.04
PCDHA4-201ENST00000378125 C21orf2O43822 256 aa21.57■■□□□ 1.04
PCDHA4-201ENST00000378125 MYL1P05976 194 aa21.57■■□□□ 1.04
PCDHA4-201ENST00000378125 SIAH1Q8IUQ4 282 aa21.57■■□□□ 1.04
PCDHA4-201ENST00000378125 SNX29Q8TEQ0 813 aa21.57■■□□□ 1.04
PCDHA4-201ENST00000378125 L2HGDHQ9H9P8 463 aa21.57■■□□□ 1.04
PCDHA4-201ENST00000378125 MRPL12P52815 198 aaKnown RBP21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 JAG1P78504 1218 aa21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 ICA1Q05084 483 aa21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 EZH2Q15910 746 aaKnown RBP21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 ANKRD40Q6AI12 368 aa21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 SV2BQ7L1I2 683 aa21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 CSGALNACT2Q8N6G5 542 aa21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 PRMT6Q96LA8 375 aaPredicted RBP21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 C7orf25Q9BPX7 421 aa21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 PDGFDQ9GZP0 370 aaPredicted RBP21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 PCDHA1Q9Y5I3 950 aa21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 PHLPP2Q6ZVD8 1323 aa21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 SIPA1L1O43166 1804 aa21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 SPDYE4A6NLX3 237 aa21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 TPM1P09493 284 aa21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 CLK2P49760 499 aaKnown RBP21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 SYCP1Q15431 976 aa21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 CCDC93Q567U6 631 aa21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 TTI2Q6NXR4 508 aa21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 KCNK18Q7Z418 384 aa21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 DUSP9Q99956 384 aaKnown RBP21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 IDI2Q9BXS1 227 aa21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.56■■□□□ 1.04
PCDHA4-201ENST00000378125 MYMKA6NI61 221 aa21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 RXRBP28702 533 aa21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 FXR2P51116 673 aaKnown RBP eCLIP21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 EN1Q05925 392 aaPredicted RBP21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 IKQ13123 557 aaPredicted RBP21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 CDC37Q16543 378 aaPredicted RBP21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 ECM1Q16610 540 aa21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 ERCC6LQ2NKX8 1250 aa21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 CNGA4Q8IV77 575 aa21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 CCDC47Q96A33 483 aaKnown RBP21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 CCDC94Q9BW85 323 aaPredicted RBP21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 KANSL2Q9H9L4 492 aa21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 YDJCA8MPS7 323 aa21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 NKRFO15226 690 aaKnown RBP eCLIP21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 PPIP5K2O43314 1243 aa21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 CCDC175P0C221 793 aa21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 AMPD3Q01432 767 aa21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 USH1GQ495M9 461 aa21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 HAS1Q92839 578 aa21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 MAGEF1Q9HAY2 307 aa21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 MAGEC2Q9UBF1 373 aaPredicted RBP21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 ITIH6Q6UXX5 1313 aa21.55■■□□□ 1.04
PCDHA4-201ENST00000378125 B4DLN1 442 aa21.54■■□□□ 1.04
PCDHA4-201ENST00000378125 IDEP14735 1019 aa21.54■■□□□ 1.04
PCDHA4-201ENST00000378125 ABCB5Q2M3G0 1257 aa21.54■■□□□ 1.04
PCDHA4-201ENST00000378125 PPP1R18Q6NYC8 613 aa21.54■■□□□ 1.04
PCDHA4-201ENST00000378125 KIAA0895Q8NCT3 520 aa21.54■■□□□ 1.04
PCDHA4-201ENST00000378125 ACRBPQ8NEB7 543 aa21.54■■□□□ 1.04
PCDHA4-201ENST00000378125 LARP4BQ92615 738 aaKnown RBP21.54■■□□□ 1.04
PCDHA4-201ENST00000378125 P2RX5Q93086 422 aa21.54■■□□□ 1.04
PCDHA4-201ENST00000378125 CNKSR1Q969H4 720 aa21.54■■□□□ 1.04
PCDHA4-201ENST00000378125 ABHD10Q9NUJ1 306 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms