RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 RPS6P62753 249 aaKnown RBP15.29■□□□□ 0.04
CKAP2-202ENST00000378034 NCOA5Q9HCD5 579 aaKnown RBP15.29■□□□□ 0.04
CKAP2-202ENST00000378034 LIMCH1Q9UPQ0 1083 aa15.29■□□□□ 0.04
CKAP2-202ENST00000378034 RPTORQ8N122 1335 aa15.28■□□□□ 0.04
CKAP2-202ENST00000378034 ASB14A6NK59 587 aa15.28■□□□□ 0.04
CKAP2-202ENST00000378034 CDKL5O76039 1030 aa15.28■□□□□ 0.04
CKAP2-202ENST00000378034 HSD17B4P51659 736 aa15.28■□□□□ 0.04
CKAP2-202ENST00000378034 AKAP17AQ02040 695 aaKnown RBP15.28■□□□□ 0.04
CKAP2-202ENST00000378034 CNTN2Q02246 1040 aa15.28■□□□□ 0.04
CKAP2-202ENST00000378034 DNERQ8NFT8 737 aa15.28■□□□□ 0.04
CKAP2-202ENST00000378034 SOWAHBA6NEL2 793 aa15.27■□□□□ 0.04
CKAP2-202ENST00000378034 B4DLN1 442 aa15.27■□□□□ 0.04
CKAP2-202ENST00000378034 OPLAHO14841 1288 aa15.27■□□□□ 0.04
CKAP2-202ENST00000378034 ST18O60284 1047 aa15.27■□□□□ 0.04
CKAP2-202ENST00000378034 PRKAR2AP13861 404 aaKnown RBP15.27■□□□□ 0.04
CKAP2-202ENST00000378034 CAPN2P17655 700 aa15.27■□□□□ 0.04
CKAP2-202ENST00000378034 CALML3P27482 149 aa15.27■□□□□ 0.04
CKAP2-202ENST00000378034 MRPL12P52815 198 aaKnown RBP15.27■□□□□ 0.04
CKAP2-202ENST00000378034 CACNB2Q08289 660 aaPredicted RBP15.27■□□□□ 0.04
CKAP2-202ENST00000378034 STK3Q13188 491 aa15.27■□□□□ 0.04
CKAP2-202ENST00000378034 PPP1R18Q6NYC8 613 aa15.27■□□□□ 0.04
CKAP2-202ENST00000378034 SLC30A10Q6XR72 485 aa15.27■□□□□ 0.04
CKAP2-202ENST00000378034 TRIM22Q8IYM9 498 aa15.27■□□□□ 0.04
CKAP2-202ENST00000378034 FGD4Q96M96 766 aa15.27■□□□□ 0.04
CKAP2-202ENST00000378034 MPHOSPH6Q99547 160 aaKnown RBP15.27■□□□□ 0.04
CKAP2-202ENST00000378034 HMX1Q9NP08 348 aaPredicted RBP15.27■□□□□ 0.04
CKAP2-202ENST00000378034 LCTP09848 1927 aa15.27■□□□□ 0.03
CKAP2-202ENST00000378034 SCRN1Q12765 414 aa15.27■□□□□ 0.03
CKAP2-202ENST00000378034 ME3Q16798 604 aa15.27■□□□□ 0.03
CKAP2-202ENST00000378034 PFKFB3Q16875 520 aaPredicted RBP15.27■□□□□ 0.03
CKAP2-202ENST00000378034 ZSCAN31Q96LW9 406 aaPredicted RBP15.27■□□□□ 0.03
CKAP2-202ENST00000378034 TMEM106CQ9BVX2 250 aa15.27■□□□□ 0.03
CKAP2-202ENST00000378034 HTTP42858 3142 aa15.26■□□□□ 0.03
CKAP2-202ENST00000378034 hCG_1642624A0A1W2PR95 340 aa15.26■□□□□ 0.03
CKAP2-202ENST00000378034 GCOM1H8Y6P7 765 aaPredicted RBP15.26■□□□□ 0.03
CKAP2-202ENST00000378034 CFBP00751 764 aa15.26■□□□□ 0.03
CKAP2-202ENST00000378034 POLR2MP0CAP2 368 aa15.26■□□□□ 0.03
CKAP2-202ENST00000378034 CCL5P13501 91 aa15.26■□□□□ 0.03
CKAP2-202ENST00000378034 SCG2P13521 617 aa15.26■□□□□ 0.03
CKAP2-202ENST00000378034 CYP2C19P33261 490 aa15.26■□□□□ 0.03
CKAP2-202ENST00000378034 SSRP1Q08945 709 aaKnown RBP15.26■□□□□ 0.03
CKAP2-202ENST00000378034 TRIM32Q13049 653 aa15.26■□□□□ 0.03
CKAP2-202ENST00000378034 HEATR3Q7Z4Q2 680 aa15.26■□□□□ 0.03
CKAP2-202ENST00000378034 SYTL5Q8TDW5 730 aaPredicted RBP15.26■□□□□ 0.03
CKAP2-202ENST00000378034 MORC4Q8TE76 937 aa15.26■□□□□ 0.03
CKAP2-202ENST00000378034 BARHL2Q9NY43 387 aa15.26■□□□□ 0.03
CKAP2-202ENST00000378034 PIK3CDO00329 1044 aa15.25■□□□□ 0.03
CKAP2-202ENST00000378034 WWC2Q6AWC2 1192 aa15.25■□□□□ 0.03
CKAP2-202ENST00000378034 CCDC12Q8WUD4 166 aaPredicted RBP15.25■□□□□ 0.03
CKAP2-202ENST00000378034 TBC1D5Q92609 795 aa15.25■□□□□ 0.03
CKAP2-202ENST00000378034 CUL5Q93034 780 aa15.25■□□□□ 0.03
CKAP2-202ENST00000378034 PHKBQ93100 1093 aa15.25■□□□□ 0.03
CKAP2-202ENST00000378034 GTF3C6Q969F1 213 aa15.25■□□□□ 0.03
CKAP2-202ENST00000378034 SLC26A6Q9BXS9 759 aa15.25■□□□□ 0.03
CKAP2-202ENST00000378034 RNF208Q9H0X6 261 aa15.25■□□□□ 0.03
CKAP2-202ENST00000378034 GLT8D2Q9H1C3 349 aa15.25■□□□□ 0.03
CKAP2-202ENST00000378034 SH2B1Q9NRF2 756 aaPredicted RBP15.25■□□□□ 0.03
CKAP2-202ENST00000378034 CNPY2Q9Y2B0 182 aa15.25■□□□□ 0.03
CKAP2-202ENST00000378034 CYBAP13498 195 aa15.25■□□□□ 0.03
CKAP2-202ENST00000378034 MCM2P49736 904 aa15.25■□□□□ 0.03
CKAP2-202ENST00000378034 ALDH5A1P51649 535 aaPredicted RBP15.25■□□□□ 0.03
CKAP2-202ENST00000378034 MTFR1Q15390 333 aa15.25■□□□□ 0.03
CKAP2-202ENST00000378034 PKN1Q16512 942 aa15.25■□□□□ 0.03
CKAP2-202ENST00000378034 NOL8Q76FK4 1167 aaKnown RBP15.25■□□□□ 0.03
CKAP2-202ENST00000378034 ARMCX2Q7L311 632 aa15.25■□□□□ 0.03
CKAP2-202ENST00000378034 FAM177A1Q8N128 213 aaPredicted RBP15.25■□□□□ 0.03
CKAP2-202ENST00000378034 NSUN6Q8TEA1 469 aaKnown RBP15.25■□□□□ 0.03
CKAP2-202ENST00000378034 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.25■□□□□ 0.03
CKAP2-202ENST00000378034 UNC93B1Q9H1C4 597 aa15.25■□□□□ 0.03
CKAP2-202ENST00000378034 PSTPIP2Q9H939 334 aa15.25■□□□□ 0.03
CKAP2-202ENST00000378034 PAK6Q9NQU5 681 aaPredicted RBP15.25■□□□□ 0.03
CKAP2-202ENST00000378034 CCDC85CA6NKD9 419 aa15.24■□□□□ 0.03
CKAP2-202ENST00000378034 STXBP3O00186 592 aa15.24■□□□□ 0.03
CKAP2-202ENST00000378034 DEXIO95424 95 aa15.24■□□□□ 0.03
CKAP2-202ENST00000378034 GJB1P08034 283 aa15.24■□□□□ 0.03
CKAP2-202ENST00000378034 NAPAP54920 295 aa15.24■□□□□ 0.03
CKAP2-202ENST00000378034 GPKOWQ92917 476 aaPredicted RBP eCLIP15.24■□□□□ 0.033e-11■□□□□ 10.3
CKAP2-202ENST00000378034 IWS1Q96ST2 819 aa15.24■□□□□ 0.03
CKAP2-202ENST00000378034 ABHD16BQ9H3Z7 469 aa15.24■□□□□ 0.03
CKAP2-202ENST00000378034 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.24■□□□□ 0.03
CKAP2-202ENST00000378034 ASTN1O14525 1302 aa15.24■□□□□ 0.03
CKAP2-202ENST00000378034 STK36Q9NRP7 1315 aa15.24■□□□□ 0.03
CKAP2-202ENST00000378034 MSCO60682 206 aa15.24■□□□□ 0.03
CKAP2-202ENST00000378034 SNAI1O95863 264 aaPredicted RBP15.24■□□□□ 0.03
CKAP2-202ENST00000378034 RMDN3Q96TC7 470 aa15.24■□□□□ 0.03
CKAP2-202ENST00000378034 SH3GLB2Q9NR46 395 aa15.24■□□□□ 0.03
CKAP2-202ENST00000378034 ESYT2A0FGR8 921 aa15.23■□□□□ 0.03
CKAP2-202ENST00000378034 LARGE1O95461 756 aa15.23■□□□□ 0.03
CKAP2-202ENST00000378034 EDNRBP24530 442 aa15.23■□□□□ 0.03
CKAP2-202ENST00000378034 SMARCC2Q8TAQ2 1214 aa15.23■□□□□ 0.03
CKAP2-202ENST00000378034 PURBQ96QR8 312 aaKnown RBP15.23■□□□□ 0.03
CKAP2-202ENST00000378034 TAAR1Q96RJ0 339 aa15.23■□□□□ 0.03
CKAP2-202ENST00000378034 RIC8AQ9NPQ8 531 aa15.23■□□□□ 0.03
CKAP2-202ENST00000378034 COL20A1Q9P218 1284 aa15.23■□□□□ 0.03
CKAP2-202ENST00000378034 MEIS2O14770 477 aa15.22■□□□□ 0.03
CKAP2-202ENST00000378034 SEPT4O43236 478 aa15.22■□□□□ 0.03
CKAP2-202ENST00000378034 CCND3P30281 292 aaPredicted RBP15.22■□□□□ 0.03
CKAP2-202ENST00000378034 HOXA13P31271 388 aaPredicted RBP15.22■□□□□ 0.03
CKAP2-202ENST00000378034 ACVR2BQ13705 512 aa15.22■□□□□ 0.03
CKAP2-202ENST00000378034 ARHGEF16Q5VV41 709 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms