RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 SALL3Q9BXA9 1300 aa15.54■□□□□ 0.08
CLCN6-205ENST00000376492 PATL2C9JE40 543 aaKnown RBP15.54■□□□□ 0.08
CLCN6-205ENST00000376492 ERC2O15083 957 aa15.54■□□□□ 0.08
CLCN6-205ENST00000376492 NMT2O60551 498 aa15.54■□□□□ 0.08
CLCN6-205ENST00000376492 CA3P07451 260 aa15.54■□□□□ 0.08
CLCN6-205ENST00000376492 PDE4BQ07343 736 aa15.54■□□□□ 0.08
CLCN6-205ENST00000376492 PPARAQ07869 468 aa15.54■□□□□ 0.08
CLCN6-205ENST00000376492 SKIV2LQ15477 1246 aaKnown RBP15.54■□□□□ 0.08
CLCN6-205ENST00000376492 IQSEC1Q6DN90 963 aa15.54■□□□□ 0.08
CLCN6-205ENST00000376492 NSMFQ6X4W1 530 aa15.54■□□□□ 0.08
CLCN6-205ENST00000376492 KIAA1211Q6ZU35 1233 aa15.54■□□□□ 0.08
CLCN6-205ENST00000376492 DEFB128Q7Z7B8 93 aa15.54■□□□□ 0.08
CLCN6-205ENST00000376492 RPUSD2Q8IZ73 545 aaKnown RBP15.54■□□□□ 0.08
CLCN6-205ENST00000376492 OTUD7AQ8TE49 926 aaPredicted RBP15.54■□□□□ 0.08
CLCN6-205ENST00000376492 PPP1R13LQ8WUF5 828 aa15.54■□□□□ 0.08
CLCN6-205ENST00000376492 PRR12Q9ULL5 1215 aa15.54■□□□□ 0.08
CLCN6-205ENST00000376492 STX8Q9UNK0 236 aa15.54■□□□□ 0.08
CLCN6-205ENST00000376492 MTMR7Q9Y216 660 aa15.54■□□□□ 0.08
CLCN6-205ENST00000376492 Q9Y3F1 56 aa15.54■□□□□ 0.08
CLCN6-205ENST00000376492 TNKSO95271 1327 aa15.53■□□□□ 0.08
CLCN6-205ENST00000376492 EPOPA6NHQ4 379 aa15.53■□□□□ 0.08
CLCN6-205ENST00000376492 ARHGEF15O94989 841 aa15.53■□□□□ 0.08
CLCN6-205ENST00000376492 ZFYP08048 801 aaPredicted RBP15.53■□□□□ 0.08
CLCN6-205ENST00000376492 MX1P20591 662 aa15.53■□□□□ 0.08
CLCN6-205ENST00000376492 PLA2G5P39877 138 aa15.53■□□□□ 0.08
CLCN6-205ENST00000376492 IRX6P78412 446 aaPredicted RBP15.53■□□□□ 0.08
CLCN6-205ENST00000376492 KRT40Q6A162 431 aa15.53■□□□□ 0.08
CLCN6-205ENST00000376492 PI4K2BQ8TCG2 481 aa15.53■□□□□ 0.08
CLCN6-205ENST00000376492 SEZ6LQ9BYH1 1024 aa15.53■□□□□ 0.08
CLCN6-205ENST00000376492 TSPYL2Q9H2G4 693 aaPredicted RBP15.53■□□□□ 0.08
CLCN6-205ENST00000376492 VTA1Q9NP79 307 aa15.53■□□□□ 0.08
CLCN6-205ENST00000376492 INCENPQ9NQS7 918 aa15.53■□□□□ 0.08
CLCN6-205ENST00000376492 IL17RBQ9NRM6 502 aa15.53■□□□□ 0.08
CLCN6-205ENST00000376492 CCPG1Q9ULG6 757 aa15.53■□□□□ 0.08
CLCN6-205ENST00000376492 PLA2G6O60733 806 aa15.52■□□□□ 0.08
CLCN6-205ENST00000376492 PURAQ00577 322 aaKnown RBP15.52■□□□□ 0.08
CLCN6-205ENST00000376492 DUSP28Q4G0W2 176 aa15.52■□□□□ 0.08
CLCN6-205ENST00000376492 TMEM67Q5HYA8 995 aa15.52■□□□□ 0.08
CLCN6-205ENST00000376492 RCSD1Q6JBY9 416 aa15.52■□□□□ 0.08
CLCN6-205ENST00000376492 MORC4Q8TE76 937 aa15.52■□□□□ 0.08
CLCN6-205ENST00000376492 NACAP1Q9BZK3 213 aa15.52■□□□□ 0.08
CLCN6-205ENST00000376492 NAPBQ9H115 298 aa15.52■□□□□ 0.08
CLCN6-205ENST00000376492 MTCH2Q9Y6C9 303 aa15.52■□□□□ 0.08
CLCN6-205ENST00000376492 LCTP09848 1927 aa15.52■□□□□ 0.07
CLCN6-205ENST00000376492 NFIBO00712 420 aa15.51■□□□□ 0.07
CLCN6-205ENST00000376492 FOXP2O15409 715 aa15.51■□□□□ 0.07
CLCN6-205ENST00000376492 SLC3A2P08195 630 aaKnown RBP15.51■□□□□ 0.07
CLCN6-205ENST00000376492 MYL3P08590 195 aa15.51■□□□□ 0.07
CLCN6-205ENST00000376492 ALDH5A1P51649 535 aaPredicted RBP15.51■□□□□ 0.07
CLCN6-205ENST00000376492 NUCB1Q02818 461 aa15.51■□□□□ 0.07
CLCN6-205ENST00000376492 CTDSPL2Q05D32 466 aa15.51■□□□□ 0.07
CLCN6-205ENST00000376492 BAATQ14032 418 aaPredicted RBP15.51■□□□□ 0.07
CLCN6-205ENST00000376492 WDR11Q9BZH6 1224 aa15.51■□□□□ 0.07
CLCN6-205ENST00000376492 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.51■□□□□ 0.07
CLCN6-205ENST00000376492 TRANK1O15050 2925 aa15.5■□□□□ 0.07
CLCN6-205ENST00000376492 TSPY2A6NKD2 308 aa15.5■□□□□ 0.07
CLCN6-205ENST00000376492 ICAM1P05362 532 aa15.5■□□□□ 0.07
CLCN6-205ENST00000376492 PFKMP08237 780 aa15.5■□□□□ 0.07
CLCN6-205ENST00000376492 SUPT20HL2P0C7V6 817 aa15.5■□□□□ 0.07
CLCN6-205ENST00000376492 SLC16A2P36021 539 aa15.5■□□□□ 0.07
CLCN6-205ENST00000376492 PDE1AP54750 535 aa15.5■□□□□ 0.07
CLCN6-205ENST00000376492 CCDC96Q2M329 555 aa15.5■□□□□ 0.07
CLCN6-205ENST00000376492 FAM47CQ5HY64 1035 aa15.5■□□□□ 0.07
CLCN6-205ENST00000376492 TTBK2Q6IQ55 1244 aa15.5■□□□□ 0.07
CLCN6-205ENST00000376492 SPRED2Q7Z698 418 aa15.5■□□□□ 0.07
CLCN6-205ENST00000376492 CHD1LQ86WJ1 897 aa15.5■□□□□ 0.07
CLCN6-205ENST00000376492 FAM122AQ96E09 287 aa15.5■□□□□ 0.07
CLCN6-205ENST00000376492 TAP1Q03518 808 aa15.49■□□□□ 0.07
CLCN6-205ENST00000376492 AAK1Q2M2I8 961 aa15.49■□□□□ 0.07
CLCN6-205ENST00000376492 NBPF20Q3BBV1 942 aa15.49■□□□□ 0.07
CLCN6-205ENST00000376492 ZMYM1Q5SVZ6 1142 aa15.49■□□□□ 0.07
CLCN6-205ENST00000376492 B4GALNT3Q6L9W6 998 aa15.49■□□□□ 0.07
CLCN6-205ENST00000376492 SLC30A10Q6XR72 485 aa15.49■□□□□ 0.07
CLCN6-205ENST00000376492 OR6J1Q8NGC5 347 aa15.49■□□□□ 0.07
CLCN6-205ENST00000376492 ARNTL2Q8WYA1 636 aa15.49■□□□□ 0.07
CLCN6-205ENST00000376492 MTG1Q9BT17 334 aaPredicted RBP15.49■□□□□ 0.07
CLCN6-205ENST00000376492 FSD1Q9BTV5 496 aa15.49■□□□□ 0.07
CLCN6-205ENST00000376492 LNPKQ9C0E8 428 aa15.49■□□□□ 0.07
CLCN6-205ENST00000376492 RANBP17Q9H2T7 1088 aaKnown RBP15.49■□□□□ 0.07
CLCN6-205ENST00000376492 POLR3EQ9NVU0 708 aa15.49■□□□□ 0.07
CLCN6-205ENST00000376492 PPP4R2Q9NY27 417 aa15.49■□□□□ 0.07
CLCN6-205ENST00000376492 PRRC2BQ5JSZ5 2229 aaKnown RBP15.49■□□□□ 0.07
CLCN6-205ENST00000376492 TCF20Q9UGU0 1960 aaKnown RBP15.48■□□□□ 0.07
CLCN6-205ENST00000376492 PTPDC1A2A3K4 754 aa15.48■□□□□ 0.07
CLCN6-205ENST00000376492 RBAK-RBAKDNI3L0D1 243 aa15.48■□□□□ 0.07
CLCN6-205ENST00000376492 GTPBP6O43824 516 aaPredicted RBP15.48■□□□□ 0.07
CLCN6-205ENST00000376492 POU3F3P20264 500 aaPredicted RBP15.48■□□□□ 0.07
CLCN6-205ENST00000376492 CPT1AP50416 773 aa15.48■□□□□ 0.07
CLCN6-205ENST00000376492 SLC9A7Q96T83 725 aa15.48■□□□□ 0.07
CLCN6-205ENST00000376492 C1QTNF1Q9BXJ1 281 aa15.48■□□□□ 0.07
CLCN6-205ENST00000376492 EPHX3Q9H6B9 360 aa15.48■□□□□ 0.07
CLCN6-205ENST00000376492 FRMPD2Q68DX3 1309 aaPredicted RBP15.47■□□□□ 0.07
CLCN6-205ENST00000376492 RBM47A0AV96 593 aaKnown RBP15.47■□□□□ 0.07
CLCN6-205ENST00000376492 RANBP6O60518 1105 aaKnown RBP15.47■□□□□ 0.07
CLCN6-205ENST00000376492 ACTN1P12814 892 aa15.47■□□□□ 0.07
CLCN6-205ENST00000376492 CALML3P27482 149 aa15.47■□□□□ 0.07
CLCN6-205ENST00000376492 LRRFIP1Q32MZ4 808 aaKnown RBP15.47■□□□□ 0.07
CLCN6-205ENST00000376492 PPP4R3BQ5MIZ7 849 aa15.47■□□□□ 0.07
CLCN6-205ENST00000376492 SYDE2Q5VT97 1194 aa15.47■□□□□ 0.07
CLCN6-205ENST00000376492 HERC6Q8IVU3 1022 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms