RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 OSBPL9Q96SU4 736 aa12.79□□□□□ -0.36
TM9SF2-201ENST00000376387 RNF41Q9H4P4 317 aaPredicted RBP12.79□□□□□ -0.36
TM9SF2-201ENST00000376387 GOLGA8KD6RF30 607 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 NDUFAB1O14561 156 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 ERCC3P19447 782 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 RCAN1P53805 252 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 DYNLL1P63167 89 aaKnown RBP12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 GUCY1A3Q02108 690 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 MIIPQ5JXC2 388 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 ANKRD40Q6AI12 368 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 TOM1L2Q6ZVM7 507 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 CADPS2Q86UW7 1296 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 CSGALNACT2Q8N6G5 542 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 TMEM60Q9H2L4 133 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 THAP9Q9H5L6 903 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 DISC1Q9NRI5 854 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 RBM12Q9NTZ6 932 aaKnown RBP12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 MAGEC2Q9UBF1 373 aaPredicted RBP12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 FNTAP49354 379 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 ZBED6P86452 979 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 RNPC3Q96LT9 517 aaKnown RBP12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 CEP89Q96ST8 783 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 FAM107BQ9H098 131 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 ZNHIT6Q9NWK9 470 aaKnown RBP12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 ARHGAP20Q9P2F6 1191 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 TNS2Q63HR2 1409 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 SLC5A1P13866 664 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 TRADDQ15628 312 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 RASSF8Q8NHQ8 419 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 GPKOWQ92917 476 aaPredicted RBP eCLIP12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 CNOT6LQ96LI5 555 aaKnown RBP12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 ABCF2Q9UG63 623 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 PCDHA13Q9Y5I0 950 aa12.78□□□□□ -0.36
TM9SF2-201ENST00000376387 NUTM2BA6NNL0 878 aaPredicted RBP12.77□□□□□ -0.36
TM9SF2-201ENST00000376387 NUTM2EB1AL46 878 aaPredicted RBP12.77□□□□□ -0.36
TM9SF2-201ENST00000376387 IPO7O95373 1038 aaKnown RBP12.77□□□□□ -0.36
TM9SF2-201ENST00000376387 GNAT2P19087 354 aa12.77□□□□□ -0.36
TM9SF2-201ENST00000376387 DNA2P51530 1060 aa12.77□□□□□ -0.36
TM9SF2-201ENST00000376387 CCDC42Q96M95 316 aa12.77□□□□□ -0.36
TM9SF2-201ENST00000376387 SH2D4AQ9H788 454 aa12.77□□□□□ -0.36
TM9SF2-201ENST00000376387 RPS6KL1Q9Y6S9 549 aa12.77□□□□□ -0.36
TM9SF2-201ENST00000376387 GLI1P08151 1106 aa12.77□□□□□ -0.37
TM9SF2-201ENST00000376387 FCER1AP12319 257 aa12.77□□□□□ -0.37
TM9SF2-201ENST00000376387 CARSP49589 748 aaKnown RBP12.77□□□□□ -0.37
TM9SF2-201ENST00000376387 ATP2B2Q01814 1243 aa12.77□□□□□ -0.37
TM9SF2-201ENST00000376387 NNTQ13423 1086 aa12.77□□□□□ -0.37
TM9SF2-201ENST00000376387 FAM47AQ5JRC9 791 aa12.77□□□□□ -0.37
TM9SF2-201ENST00000376387 TMC4Q7Z404 712 aa12.77□□□□□ -0.37
TM9SF2-201ENST00000376387 C2CD5Q86YS7 1000 aa12.77□□□□□ -0.37
TM9SF2-201ENST00000376387 CCDC170Q8IYT3 715 aa12.77□□□□□ -0.37
TM9SF2-201ENST00000376387 IFIH1Q9BYX4 1025 aaKnown RBP12.77□□□□□ -0.37
TM9SF2-201ENST00000376387 STIM2Q9P246 746 aa12.77□□□□□ -0.37
TM9SF2-201ENST00000376387 ZNF233A6NK53 670 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 PDE8AO60658 829 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 PDE6BP35913 854 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 SEC24CP53992 1094 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 SKOR1P84550 965 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 STK4Q13043 487 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 GIMAP8Q8ND71 665 aaPredicted RBP12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 MARCH6O60337 910 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 MTIF2P46199 727 aaKnown RBP12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 GSCP56915 257 aaPredicted RBP12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 MYBPC2Q14324 1141 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 GBP6Q6ZN66 633 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 FNBP4Q8N3X1 1017 aaPredicted RBP12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 CCDC43Q96MW1 224 aaKnown RBP12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 NOC4LQ9BVI4 516 aaKnown RBP12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 KDM4CQ9H3R0 1056 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 FAM207AQ9NSI2 230 aaPredicted RBP12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 NFU1Q9UMS0 254 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 PSMA7O14818 248 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 BUB1O43683 1085 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 OPA1O60313 960 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 HSF2BPO75031 334 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 SCG2P13521 617 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 EIF4A3P38919 411 aaKnown RBP12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 GUCY2FP51841 1108 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 EPHB4P54760 987 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 SLC4A8Q2Y0W8 1093 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 IQCEQ6IPM2 695 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 CCDC70Q6NSX1 233 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 MTA3Q9BTC8 594 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 CD248Q9HCU0 757 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 MROH5Q6ZUA9 1318 aa12.76□□□□□ -0.37
TM9SF2-201ENST00000376387 EPB41P11171 864 aaKnown RBP12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 LONP1P36776 959 aaKnown RBP12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 KIF11P52732 1056 aa12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 SPA17Q15506 151 aa12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 CCDC91Q7Z6B0 441 aa12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 NME8Q8N427 588 aa12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 TRIM58Q8NG06 486 aa12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 KCNV2Q8TDN2 545 aa12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 IFT81Q8WYA0 676 aa12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 DUOX1Q9NRD9 1551 aa12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 ARAP2Q8WZ64 1704 aa12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 PLCH1Q4KWH8 1693 aa12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 SLIT2O94813 1529 aa12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 MAGEB6P1A0A0J9YX57 407 aa12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 TACC1O75410 805 aa12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 ZNF572Q7Z3I7 529 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms