RNA–Protein interactions for RNA: ENST00000376233.7

ZNF549-202, Transcript of zinc finger protein 549, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF549, Length 4,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-202ENST00000376233 KCPQ6ZWJ8 1503 aa11.78□□□□□ -0.52
ZNF549-202ENST00000376233 CCDC151A5D8V7 595 aa11.77□□□□□ -0.52
ZNF549-202ENST00000376233 PPP1R12BO60237 982 aaPredicted RBP11.77□□□□□ -0.52
ZNF549-202ENST00000376233 GRIK5Q16478 980 aa11.77□□□□□ -0.52
ZNF549-202ENST00000376233 ANKRD40Q6AI12 368 aa11.77□□□□□ -0.52
ZNF549-202ENST00000376233 PCDHA1Q9Y5I3 950 aa11.77□□□□□ -0.52
ZNF549-202ENST00000376233 SCN11AQ9UI33 1791 aa11.77□□□□□ -0.52
ZNF549-202ENST00000376233 SBK1Q52WX2 424 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 ODF2Q5BJF6 829 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 FAM26FQ5R3K3 315 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 CCDC84Q86UT8 332 aaPredicted RBP11.77□□□□□ -0.53
ZNF549-202ENST00000376233 SPICE1Q8N0Z3 855 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 SUGCTQ9HAC7 445 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 IL17RBQ9NRM6 502 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 BCCIPQ9P287 314 aaKnown RBP eCLIP11.77□□□□□ -0.53
ZNF549-202ENST00000376233 SAMM50Q9Y512 469 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 ARFGEF2Q9Y6D5 1785 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 FAM237AA0A1B0GTK4 181 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 MEIS1O00470 390 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 LAD1O00515 517 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 POLR2FP61218 127 aaKnown RBP11.77□□□□□ -0.53
ZNF549-202ENST00000376233 RASSF7Q02833 373 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 TUBB2AQ13885 445 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 SND1Q7KZF4 910 aaKnown RBP eCLIP11.77□□□□□ -0.53
ZNF549-202ENST00000376233 MAEAQ7L5Y9 396 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 SLC51AQ86UW1 340 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 ADSSL1Q8N142 457 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 AK8Q96MA6 479 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 TUBB2BQ9BVA1 445 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 MXD3Q9BW11 206 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 LSM14BQ9BX40 385 aaKnown RBP11.77□□□□□ -0.53
ZNF549-202ENST00000376233 FAM107BQ9H098 131 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 SH3GLB2Q9NR46 395 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 PANK4Q9NVE7 773 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 SPATA31A5Q5VU36 1347 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 SPATA31A7Q8IWB4 1347 aa11.77□□□□□ -0.53
ZNF549-202ENST00000376233 PPP1R2P41236 205 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 ERVK-24P63145 666 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 VPS36Q86VN1 386 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 SYCP3Q8IZU3 236 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 THAP9Q9H5L6 903 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 LIMA1Q9UHB6 759 aaKnown RBP11.76□□□□□ -0.53
ZNF549-202ENST00000376233 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.76□□□□□ -0.53
ZNF549-202ENST00000376233 GOLGA6L10A6NI86 522 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 USP17L15C9J2P7 530 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 USP17L13C9JLJ4 530 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 USP17L11C9JVI0 530 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 USP17L18D6R9N7 530 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 USP17L22D6RA61 530 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 USP17L17D6RBQ6 530 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 USP17L19D6RCP7 530 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 USP17L20D6RJB6 530 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 STXBP3O00186 592 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 AKR1B1P15121 316 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 PMS1P54277 932 aaKnown RBP11.76□□□□□ -0.53
ZNF549-202ENST00000376233 USP17L24Q0WX57 530 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 TTBK2Q6IQ55 1244 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 USP17L6PQ6QN14 398 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 GSPT2Q8IYD1 628 aaKnown RBP11.76□□□□□ -0.53
ZNF549-202ENST00000376233 TEKT1Q969V4 418 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 TRIM9Q9C026 710 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 MAD2L2Q9UI95 211 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 CETN3O15182 167 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 TRIM37O94972 964 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 MOCS3O95396 460 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 EIF4A3P38919 411 aaKnown RBP11.76□□□□□ -0.53
ZNF549-202ENST00000376233 C2orf54Q08AI8 447 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 PABPC4Q13310 644 aaKnown RBP eCLIP11.76□□□□□ -0.53
ZNF549-202ENST00000376233 SLC9C1Q4G0N8 1177 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 MAATS1Q7Z4T9 603 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 ZBTB21Q9ULJ3 1066 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 FAN1Q9Y2M0 1017 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 H2AFXP16104 143 aaPredicted RBP11.76□□□□□ -0.53
ZNF549-202ENST00000376233 ZBED6P86452 979 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 ZFYVE27Q5T4F4 411 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 NT5DC1Q5TFE4 455 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 PDXDC2PQ6P474 469 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 DDX12PQ92771 950 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 NDST4Q9H3R1 872 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 VEZTQ9HBM0 779 aa11.76□□□□□ -0.53
ZNF549-202ENST00000376233 ATRNO75882 1429 aa11.75□□□□□ -0.53
ZNF549-202ENST00000376233 GDF11O95390 407 aa11.75□□□□□ -0.53
ZNF549-202ENST00000376233 TTLL1O95922 423 aa11.75□□□□□ -0.53
ZNF549-202ENST00000376233 CFBP00751 764 aa11.75□□□□□ -0.53
ZNF549-202ENST00000376233 KLHL30Q0D2K2 578 aa11.75□□□□□ -0.53
ZNF549-202ENST00000376233 TBX2Q13207 712 aaPredicted RBP11.75□□□□□ -0.53
ZNF549-202ENST00000376233 RCSD1Q6JBY9 416 aa11.75□□□□□ -0.53
ZNF549-202ENST00000376233 C10orf67Q8IYJ2 551 aa11.75□□□□□ -0.53
ZNF549-202ENST00000376233 TSGA10Q9BZW7 698 aa11.75□□□□□ -0.53
ZNF549-202ENST00000376233 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.75□□□□□ -0.53
ZNF549-202ENST00000376233 ZNF446Q9NWS9 450 aa11.75□□□□□ -0.53
ZNF549-202ENST00000376233 PCDHB13Q9Y5F0 798 aa11.75□□□□□ -0.53
ZNF549-202ENST00000376233 H0YHG0 523 aa11.75□□□□□ -0.53
ZNF549-202ENST00000376233 ADAMTS3O15072 1205 aa11.75□□□□□ -0.53
ZNF549-202ENST00000376233 ATP1A1P05023 1023 aaKnown RBP11.75□□□□□ -0.53
ZNF549-202ENST00000376233 CDKAL1Q5VV42 579 aa11.75□□□□□ -0.53
ZNF549-202ENST00000376233 C8orf74Q6P047 294 aa11.75□□□□□ -0.53
ZNF549-202ENST00000376233 CERS3Q8IU89 383 aa11.75□□□□□ -0.53
ZNF549-202ENST00000376233 NEDD1Q8NHV4 660 aa11.75□□□□□ -0.53
ZNF549-202ENST00000376233 CUEDC2Q9H467 287 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms