RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 TMEM60Q9H2L4 133 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 PPP1R9AQ9ULJ8 1098 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 STK24Q9Y6E0 443 aa12.61□□□□□ -0.39
PDPN-202ENST00000376057 VWA3AA6NCI4 1184 aa12.6□□□□□ -0.39
PDPN-202ENST00000376057 TXLNAP40222 546 aa12.6□□□□□ -0.39
PDPN-202ENST00000376057 NLRP12P59046 1061 aa12.6□□□□□ -0.39
PDPN-202ENST00000376057 LETM2Q2VYF4 491 aa12.6□□□□□ -0.39
PDPN-202ENST00000376057 IQUBQ8NA54 791 aa12.6□□□□□ -0.39
PDPN-202ENST00000376057 ANO3Q9BYT9 981 aa12.6□□□□□ -0.39
PDPN-202ENST00000376057 A0A0G2JMZ2 1700 aa12.6□□□□□ -0.39
PDPN-202ENST00000376057 ZNF536O15090 1300 aa12.6□□□□□ -0.39
PDPN-202ENST00000376057 POLR2DO15514 142 aaKnown RBP12.6□□□□□ -0.39
PDPN-202ENST00000376057 RAD21O60216 631 aa12.6□□□□□ -0.39
PDPN-202ENST00000376057 VCAM1P19320 739 aa12.6□□□□□ -0.39
PDPN-202ENST00000376057 HSD17B4P51659 736 aa12.6□□□□□ -0.39
PDPN-202ENST00000376057 CCDC173Q0VFZ6 552 aa12.6□□□□□ -0.39
PDPN-202ENST00000376057 PDLIM2Q96JY6 352 aa12.6□□□□□ -0.39
PDPN-202ENST00000376057 NAT10Q9H0A0 1025 aaKnown RBP12.6□□□□□ -0.39
PDPN-202ENST00000376057 PTPRFP10586 1907 aa12.59□□□□□ -0.39
PDPN-202ENST00000376057 PPP1R12BO60237 982 aaPredicted RBP12.59□□□□□ -0.39
PDPN-202ENST00000376057 MCF2L2Q86YR7 1114 aa12.59□□□□□ -0.39
PDPN-202ENST00000376057 KCTD17Q8N5Z5 321 aa12.59□□□□□ -0.39
PDPN-202ENST00000376057 ANP32BQ92688 251 aaKnown RBP12.59□□□□□ -0.39
PDPN-202ENST00000376057 EPSTI1Q96J88 318 aa12.59□□□□□ -0.39
PDPN-202ENST00000376057 RAB34Q9BZG1 259 aa12.59□□□□□ -0.39
PDPN-202ENST00000376057 EHMT1Q9H9B1 1298 aa12.59□□□□□ -0.39
PDPN-202ENST00000376057 FRMPD4Q14CM0 1322 aa12.59□□□□□ -0.39
PDPN-202ENST00000376057 HOXA7P31268 230 aaPredicted RBP12.59□□□□□ -0.39
PDPN-202ENST00000376057 IREB2P48200 963 aaKnown RBP12.59□□□□□ -0.39
PDPN-202ENST00000376057 MTMR2Q13614 643 aa12.59□□□□□ -0.39
PDPN-202ENST00000376057 GPR162Q16538 588 aa12.59□□□□□ -0.39
PDPN-202ENST00000376057 UBE2SQ16763 222 aa12.59□□□□□ -0.39
PDPN-202ENST00000376057 KIFC2Q96AC6 838 aa12.59□□□□□ -0.39
PDPN-202ENST00000376057 KCNMB3Q9NPA1 279 aa12.59□□□□□ -0.39
PDPN-202ENST00000376057 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.59□□□□□ -0.39
PDPN-202ENST00000376057 SNCAIPQ9Y6H5 919 aa12.59□□□□□ -0.39
PDPN-202ENST00000376057 POSTNQ15063 836 aa12.58□□□□□ -0.4
PDPN-202ENST00000376057 CALCRLQ16602 461 aa12.58□□□□□ -0.4
PDPN-202ENST00000376057 ANO6Q4KMQ2 910 aa12.58□□□□□ -0.4
PDPN-202ENST00000376057 PDXDC2PQ6P474 469 aa12.58□□□□□ -0.4
PDPN-202ENST00000376057 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.58□□□□□ -0.4
PDPN-202ENST00000376057 USP49Q70CQ1 688 aa12.58□□□□□ -0.4
PDPN-202ENST00000376057 LDHDQ86WU2 507 aa12.58□□□□□ -0.4
PDPN-202ENST00000376057 SLFN12Q8IYM2 578 aa12.58□□□□□ -0.4
PDPN-202ENST00000376057 ZKSCAN4Q969J2 545 aaPredicted RBP12.58□□□□□ -0.4
PDPN-202ENST00000376057 TAF1DQ9H5J8 278 aaPredicted RBP12.58□□□□□ -0.4
PDPN-202ENST00000376057 SCAF8Q9UPN6 1271 aaKnown RBP12.58□□□□□ -0.4
PDPN-202ENST00000376057 A0A087X0B3 334 aa12.58□□□□□ -0.4
PDPN-202ENST00000376057 GCOM1H8Y6P7 765 aaPredicted RBP12.58□□□□□ -0.4
PDPN-202ENST00000376057 POLR2MP0CAP2 368 aa12.58□□□□□ -0.4
PDPN-202ENST00000376057 PPATQ06203 517 aa12.58□□□□□ -0.4
PDPN-202ENST00000376057 SPP2Q13103 211 aa12.58□□□□□ -0.4
PDPN-202ENST00000376057 TKFCQ3LXA3 575 aa12.58□□□□□ -0.4
PDPN-202ENST00000376057 CEP57L1Q8IYX8 460 aa12.58□□□□□ -0.4
PDPN-202ENST00000376057 GTPBP4Q9BZE4 634 aaKnown RBP12.58□□□□□ -0.4
PDPN-202ENST00000376057 CCDC39Q9UFE4 941 aa12.58□□□□□ -0.4
PDPN-202ENST00000376057 DDX25Q9UHL0 483 aaKnown RBP12.58□□□□□ -0.4
PDPN-202ENST00000376057 SERTAD1Q9UHV2 236 aa12.58□□□□□ -0.4
PDPN-202ENST00000376057 RPTORQ8N122 1335 aa12.58□□□□□ -0.4
PDPN-202ENST00000376057 SPDYE3A6NKU9 549 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 POTECB2RU33 542 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 USP17L15C9J2P7 530 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 USP17L13C9JLJ4 530 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 USP17L11C9JVI0 530 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 USP17L18D6R9N7 530 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 USP17L22D6RA61 530 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 USP17L17D6RBQ6 530 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 USP17L19D6RCP7 530 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 USP17L20D6RJB6 530 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 NF2P35240 595 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 USP17L24Q0WX57 530 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 IQCB1Q15051 598 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 TMEM266Q2M3C6 531 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 TPRNQ4KMQ1 711 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 HYIQ5T013 277 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 USP17L6PQ6QN14 398 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 CATSPERGQ6ZRH7 1159 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 KRT26Q7Z3Y9 468 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 REPS2Q8NFH8 660 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 UBE2Q2Q8WVN8 375 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 FAM20AQ96MK3 541 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 GSDMAQ96QA5 445 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 RPAP3Q9H6T3 665 aaPredicted RBP12.57□□□□□ -0.4
PDPN-202ENST00000376057 DISC1Q9NRI5 854 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 ZHX2Q9Y6X8 837 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 ZBED4O75132 1171 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 SMC2O95347 1197 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 DSG3P32926 999 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 ARHGAP4P98171 946 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 CNNM4Q6P4Q7 775 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 PAGE5Q96GU1 130 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 VWA5AO00534 786 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 CXCL11O14625 94 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 ZNF165P49910 485 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 SPECC1Q5M775 1068 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 NIPA1Q7RTP0 329 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 POTEDQ86YR6 584 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 PROCA1Q8NCQ7 364 aaPredicted RBP12.57□□□□□ -0.4
PDPN-202ENST00000376057 CLEC4DQ8WXI8 215 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 HAS1Q92839 578 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms