RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 FDPSP14324 419 aaKnown RBP13.51□□□□□ -0.25
C9orf3-203ENST00000375315 BTDP43251 543 aa13.51□□□□□ -0.25
C9orf3-203ENST00000375315 FILIP1LQ4L180 1135 aa13.51□□□□□ -0.25
C9orf3-203ENST00000375315 AKNAD1Q5T1N1 836 aa13.51□□□□□ -0.25
C9orf3-203ENST00000375315 CCDC121Q6ZUS5 278 aa13.51□□□□□ -0.25
C9orf3-203ENST00000375315 MB21D2Q8IYB1 491 aaPredicted RBP13.51□□□□□ -0.25
C9orf3-203ENST00000375315 AIFM3Q96NN9 605 aa13.51□□□□□ -0.25
C9orf3-203ENST00000375315 CRNKL1Q9BZJ0 848 aaKnown RBP13.51□□□□□ -0.25
C9orf3-203ENST00000375315 BATF3Q9NR55 127 aa13.51□□□□□ -0.25
C9orf3-203ENST00000375315 SCAF8Q9UPN6 1271 aaKnown RBP13.51□□□□□ -0.25
C9orf3-203ENST00000375315 RGL2O15211 777 aa13.5□□□□□ -0.25
C9orf3-203ENST00000375315 HSF2BPO75031 334 aa13.5□□□□□ -0.25
C9orf3-203ENST00000375315 PPP6R2O75170 966 aa13.5□□□□□ -0.25
C9orf3-203ENST00000375315 RWDD2BP57060 319 aa13.5□□□□□ -0.25
C9orf3-203ENST00000375315 IFFO1Q0D2I5 559 aa13.5□□□□□ -0.25
C9orf3-203ENST00000375315 RBBP5Q15291 538 aaKnown RBP13.5□□□□□ -0.25
C9orf3-203ENST00000375315 ALS2CLQ60I27 953 aa13.5□□□□□ -0.25
C9orf3-203ENST00000375315 TLDC1Q6P9B6 456 aa13.5□□□□□ -0.25
C9orf3-203ENST00000375315 CYB5D1Q6P9G0 228 aa13.5□□□□□ -0.25
C9orf3-203ENST00000375315 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.5□□□□□ -0.25
C9orf3-203ENST00000375315 SH3BP1Q9Y3L3 701 aa13.5□□□□□ -0.25
C9orf3-203ENST00000375315 MYBL2P10244 700 aa13.5□□□□□ -0.25
C9orf3-203ENST00000375315 FMR1Q06787 632 aaKnown RBP eCLIP13.5□□□□□ -0.25
C9orf3-203ENST00000375315 SHC4Q6S5L8 630 aa13.5□□□□□ -0.25
C9orf3-203ENST00000375315 TRMT44Q8IYL2 757 aaKnown RBP13.5□□□□□ -0.25
C9orf3-203ENST00000375315 AENQ8WTP8 325 aaKnown RBP13.5□□□□□ -0.25
C9orf3-203ENST00000375315 ZNF473Q8WTR7 871 aaKnown RBP13.5□□□□□ -0.25
C9orf3-203ENST00000375315 TATDN2Q93075 761 aa13.5□□□□□ -0.25
C9orf3-203ENST00000375315 FAM237AA0A1B0GTK4 181 aa13.5□□□□□ -0.25
C9orf3-203ENST00000375315 PDHBP11177 359 aa13.5□□□□□ -0.25
C9orf3-203ENST00000375315 DPEP1P16444 411 aa13.5□□□□□ -0.25
C9orf3-203ENST00000375315 BMP6P22004 513 aa13.5□□□□□ -0.25
C9orf3-203ENST00000375315 TCP10Q12799 353 aa13.5□□□□□ -0.25
C9orf3-203ENST00000375315 IFT88Q13099 833 aa13.5□□□□□ -0.25
C9orf3-203ENST00000375315 FOXP4Q8IVH2 680 aaPredicted RBP13.5□□□□□ -0.25
C9orf3-203ENST00000375315 UBAC1Q9BSL1 405 aa13.5□□□□□ -0.25
C9orf3-203ENST00000375315 SAMSN1Q9NSI8 373 aaKnown RBP13.5□□□□□ -0.25
C9orf3-203ENST00000375315 MAN1B1Q9UKM7 699 aa13.5□□□□□ -0.25
C9orf3-203ENST00000375315 LAMB2P55268 1798 aa13.49□□□□□ -0.25
C9orf3-203ENST00000375315 PSMD14O00487 310 aa13.49□□□□□ -0.25
C9orf3-203ENST00000375315 TEX33O43247 280 aa13.49□□□□□ -0.25
C9orf3-203ENST00000375315 RAD21O60216 631 aa13.49□□□□□ -0.25
C9orf3-203ENST00000375315 CASP14P31944 242 aa13.49□□□□□ -0.25
C9orf3-203ENST00000375315 LSP1P33241 339 aa13.49□□□□□ -0.25
C9orf3-203ENST00000375315 E2F5Q15329 346 aa13.49□□□□□ -0.25
C9orf3-203ENST00000375315 SPTY2D1Q68D10 685 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-203ENST00000375315 CYP26C1Q6V0L0 522 aa13.49□□□□□ -0.25
C9orf3-203ENST00000375315 ITFG2Q969R8 447 aa13.49□□□□□ -0.25
C9orf3-203ENST00000375315 DCP1AQ9NPI6 582 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-203ENST00000375315 GUCA1BQ9UMX6 200 aa13.49□□□□□ -0.25
C9orf3-203ENST00000375315 BAZ2BQ9UIF8 2168 aaKnown RBP13.49□□□□□ -0.25
C9orf3-203ENST00000375315 RAD17O75943 681 aa13.49□□□□□ -0.25
C9orf3-203ENST00000375315 FECHP22830 423 aa13.49□□□□□ -0.25
C9orf3-203ENST00000375315 LONRF3Q496Y0 759 aa13.49□□□□□ -0.25
C9orf3-203ENST00000375315 RESP18Q5W5W9 173 aa13.49□□□□□ -0.25
C9orf3-203ENST00000375315 MAB21L3Q8N8X9 362 aa13.49□□□□□ -0.25
C9orf3-203ENST00000375315 CTAGE1Q96RT6 745 aa13.49□□□□□ -0.25
C9orf3-203ENST00000375315 ZNF277Q9NRM2 450 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-203ENST00000375315 CPSF2Q9P2I0 782 aaKnown RBP13.49□□□□□ -0.25
C9orf3-203ENST00000375315 KCNH3Q9ULD8 1083 aa13.49□□□□□ -0.25
C9orf3-203ENST00000375315 ERICH2A1L162 156 aa13.48□□□□□ -0.25
C9orf3-203ENST00000375315 ABL1P00519 1130 aa13.48□□□□□ -0.25
C9orf3-203ENST00000375315 ELOA2Q8IYF1 753 aaPredicted RBP13.48□□□□□ -0.25
C9orf3-203ENST00000375315 FUKQ8N0W3 1084 aa13.48□□□□□ -0.25
C9orf3-203ENST00000375315 CERS5Q8N5B7 392 aa13.48□□□□□ -0.25
C9orf3-203ENST00000375315 CCDC26Q8TAB7 109 aa13.48□□□□□ -0.25
C9orf3-203ENST00000375315 RUBCNQ92622 972 aa13.48□□□□□ -0.25
C9orf3-203ENST00000375315 CAPZA3Q96KX2 299 aa13.48□□□□□ -0.25
C9orf3-203ENST00000375315 PPIP5K2O43314 1243 aa13.48□□□□□ -0.25
C9orf3-203ENST00000375315 SSBP05455 408 aaKnown RBP eCLIP13.48□□□□□ -0.25
C9orf3-203ENST00000375315 GNAT2P19087 354 aa13.48□□□□□ -0.25
C9orf3-203ENST00000375315 ATP1A2P50993 1020 aa13.48□□□□□ -0.25
C9orf3-203ENST00000375315 KIF23Q02241 960 aaPredicted RBP13.48□□□□□ -0.25
C9orf3-203ENST00000375315 HOOK2Q96ED9 719 aa13.48□□□□□ -0.25
C9orf3-203ENST00000375315 SAAL1Q96ER3 474 aa13.48□□□□□ -0.25
C9orf3-203ENST00000375315 KIF9Q9HAQ2 790 aa13.48□□□□□ -0.25
C9orf3-203ENST00000375315 ANGEL1Q9UNK9 670 aaKnown RBP13.48□□□□□ -0.25
C9orf3-203ENST00000375315 RPSAP08865 295 aaKnown RBP13.48□□□□□ -0.25
C9orf3-203ENST00000375315 METAP2P50579 478 aaKnown RBP eCLIP13.48□□□□□ -0.25
C9orf3-203ENST00000375315 TRIML1Q8N9V2 468 aa13.48□□□□□ -0.25
C9orf3-203ENST00000375315 SPDL1Q96EA4 605 aa13.48□□□□□ -0.25
C9orf3-203ENST00000375315 SLF1Q9BQI6 1058 aa13.48□□□□□ -0.25
C9orf3-203ENST00000375315 MKNK2Q9HBH9 465 aa13.48□□□□□ -0.25
C9orf3-203ENST00000375315 TPX2Q9ULW0 747 aaKnown RBP13.48□□□□□ -0.25
C9orf3-203ENST00000375315 SLC12A7Q9Y666 1083 aa13.48□□□□□ -0.25
C9orf3-203ENST00000375315 ZMYM6O95789 1325 aa13.47□□□□□ -0.25
C9orf3-203ENST00000375315 TSPY2A6NKD2 308 aa13.47□□□□□ -0.25
C9orf3-203ENST00000375315 ENC1O14682 589 aa13.47□□□□□ -0.25
C9orf3-203ENST00000375315 SEMA3EO15041 775 aa13.47□□□□□ -0.25
C9orf3-203ENST00000375315 ERCC5P28715 1186 aaPredicted RBP13.47□□□□□ -0.25
C9orf3-203ENST00000375315 PLCD1P51178 756 aa13.47□□□□□ -0.25
C9orf3-203ENST00000375315 TTMPQ5BVD1 217 aa13.47□□□□□ -0.25
C9orf3-203ENST00000375315 PAPD7Q5XG87 772 aaKnown RBP13.47□□□□□ -0.25
C9orf3-203ENST00000375315 KDM7AQ6ZMT4 941 aa13.47□□□□□ -0.25
C9orf3-203ENST00000375315 ARL8AQ96BM9 186 aa13.47□□□□□ -0.25
C9orf3-203ENST00000375315 FAM210AQ96ND0 272 aa13.47□□□□□ -0.25
C9orf3-203ENST00000375315 HAUS4Q9H6D7 363 aa13.47□□□□□ -0.25
C9orf3-203ENST00000375315 HDAC6Q9UBN7 1215 aa13.47□□□□□ -0.25
C9orf3-203ENST00000375315 LRP5O75197 1615 aa13.47□□□□□ -0.25
C9orf3-203ENST00000375315 FAM196BA6NMK8 535 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms