RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 C1QL4Q86Z23 238 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 C1orf127Q8N9H9 656 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 RUNDC1Q96C34 613 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 HHIPQ96QV1 700 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 APBA2Q99767 749 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 RBCK1Q9BYM8 510 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 ACBD3Q9H3P7 528 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 CASS4Q9NQ75 786 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 PGAP2Q9UHJ9 254 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 INPP5FQ9Y2H2 1132 aa2.86□□□□□ -1.95
CCDC7-204ENST00000375025 ACEP12821 1306 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 CCDC189A1A4V9 331 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 IFRD1O00458 451 aaPredicted RBP2.85□□□□□ -1.95
CCDC7-204ENST00000375025 SORBS3O60504 671 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 FGAP02671 866 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 IKBKEQ14164 716 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 NFKBIBQ15653 356 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 ODR4Q5SWX8 454 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 ZNF648Q5T619 568 aaPredicted RBP2.85□□□□□ -1.95
CCDC7-204ENST00000375025 LRP10Q7Z4F1 713 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 FBXL6Q8N531 539 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 FBLIM1Q8WUP2 373 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 SNRNP27Q8WVK2 155 aaKnown RBP2.85□□□□□ -1.95
CCDC7-204ENST00000375025 STAG1Q8WVM7 1258 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 IL17RAQ96F46 866 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 MKNK2Q9HBH9 465 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 DDX21Q9NR30 783 aaKnown RBP eCLIP2.85□□□□□ -1.95
CCDC7-204ENST00000375025 PAPPA2Q9BXP8 1791 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 P4HBP07237 508 aaKnown RBP2.85□□□□□ -1.95
CCDC7-204ENST00000375025 CDC25BP30305 580 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 LRIT3Q3SXY7 679 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 L1TD1Q5T7N2 865 aaKnown RBP2.85□□□□□ -1.95
CCDC7-204ENST00000375025 OGFOD3Q6PK18 319 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 CAPN12Q6ZSI9 719 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 C12orf50Q8NA57 414 aaPredicted RBP2.85□□□□□ -1.95
CCDC7-204ENST00000375025 NUDT16Q96DE0 195 aaKnown RBP2.85□□□□□ -1.95
CCDC7-204ENST00000375025 TBC1D32Q96NH3 1257 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 CITED4Q96RK1 184 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 PAGR1Q9BTK6 254 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 SIRPGQ9P1W8 387 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 KANSL3Q9P2N6 904 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 ZNF69Q9UC07 566 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 SFMBT1Q9UHJ3 866 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 SLC5A6Q9Y289 635 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 NUB1Q9Y5A7 615 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 ACTL7BQ9Y614 415 aa2.85□□□□□ -1.95
CCDC7-204ENST00000375025 ABL1P00519 1130 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 FGRP09769 529 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 VDRP11473 427 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 DPEP1P16444 411 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 NPR3P17342 541 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 DAB2P98082 770 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 FKBP4Q02790 459 aaKnown RBP eCLIP2.84□□□□□ -1.95
CCDC7-204ENST00000375025 SERINC3Q13530 473 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 DUSP27Q5VZP5 1158 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 ICE2Q659A1 982 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 CASC1Q6TDU7 716 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 ZNF438Q7Z4V0 828 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 SPRED2Q7Z698 418 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 ZKSCAN3Q9BRR0 538 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 INO80BQ9C086 356 aaPredicted RBP2.84□□□□□ -1.95
CCDC7-204ENST00000375025 SEMA6CQ9H3T2 930 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 MBNL3Q9NUK0 354 aaKnown RBP2.84□□□□□ -1.95
CCDC7-204ENST00000375025 VTI1BQ9UEU0 232 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 EPB41L2O43491 1005 aaKnown RBP2.84□□□□□ -1.95
CCDC7-204ENST00000375025 PRMT3O60678 531 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 PDGFAP04085 211 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 AMPD3Q01432 767 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 MAP3K11Q16584 847 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 HP1BP3Q5SSJ5 553 aaPredicted RBP2.84□□□□□ -1.95
CCDC7-204ENST00000375025 TTLL5Q6EMB2 1281 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 MCF2L2Q86YR7 1114 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 SVIPQ8NHG7 77 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 C1QTNF1Q9BXJ1 281 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 SRRTQ9BXP5 876 aaKnown RBP2.84□□□□□ -1.95
CCDC7-204ENST00000375025 GGNBP2Q9H3C7 697 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 MTMR10Q9NXD2 777 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 VAV3Q9UKW4 847 aa2.84□□□□□ -1.95
CCDC7-204ENST00000375025 TPX2Q9ULW0 747 aaKnown RBP2.84□□□□□ -1.95
CCDC7-204ENST00000375025 SCN11AQ9UI33 1791 aa2.84□□□□□ -1.96
CCDC7-204ENST00000375025 CGNL1Q0VF96 1302 aa2.84□□□□□ -1.96
CCDC7-204ENST00000375025 TIMM44O43615 452 aa2.84□□□□□ -1.96
CCDC7-204ENST00000375025 GCP02774 474 aa2.84□□□□□ -1.96
CCDC7-204ENST00000375025 KRT18P05783 430 aaKnown RBP2.84□□□□□ -1.96
CCDC7-204ENST00000375025 CES1P23141 567 aa2.84□□□□□ -1.96
CCDC7-204ENST00000375025 MZF1P28698 734 aaPredicted RBP2.84□□□□□ -1.96
CCDC7-204ENST00000375025 GNALP38405 381 aa2.84□□□□□ -1.96
CCDC7-204ENST00000375025 USP11P51784 963 aa2.84□□□□□ -1.96
CCDC7-204ENST00000375025 ATP2B2Q01814 1243 aa2.84□□□□□ -1.96
CCDC7-204ENST00000375025 PSMD2Q13200 908 aa2.84□□□□□ -1.96
CCDC7-204ENST00000375025 PPP2R5AQ15172 486 aa2.84□□□□□ -1.96
CCDC7-204ENST00000375025 CHRNA2Q15822 529 aa2.84□□□□□ -1.96
CCDC7-204ENST00000375025 ENOX2Q16206 610 aaKnown RBP2.84□□□□□ -1.96
CCDC7-204ENST00000375025 FERMT3Q86UX7 667 aa2.84□□□□□ -1.96
CCDC7-204ENST00000375025 SIAH1Q8IUQ4 282 aa2.84□□□□□ -1.96
CCDC7-204ENST00000375025 DRC7Q8IY82 874 aa2.84□□□□□ -1.96
CCDC7-204ENST00000375025 PDILTQ8N807 584 aa2.84□□□□□ -1.96
CCDC7-204ENST00000375025 SMARCC1Q92922 1105 aaPredicted RBP2.84□□□□□ -1.96
CCDC7-204ENST00000375025 ZNF512BQ96KM6 892 aaPredicted RBP2.84□□□□□ -1.96
CCDC7-204ENST00000375025 OSMRQ99650 979 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms