RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 CALML4Q96GE6 196 aa19.09■□□□□ 0.65
RXRB-201ENST00000374680 ZHX3Q9H4I2 956 aa19.09■□□□□ 0.65
RXRB-201ENST00000374680 DBNDD1Q9H9R9 158 aa19.09■□□□□ 0.65
RXRB-201ENST00000374680 MTMR4Q9NYA4 1195 aa19.09■□□□□ 0.65
RXRB-201ENST00000374680 TNRC6CQ9HCJ0 1690 aaKnown RBP19.09■□□□□ 0.65
RXRB-201ENST00000374680 MACROD2A1Z1Q3 448 aa19.08■□□□□ 0.65
RXRB-201ENST00000374680 PLEKP08567 350 aaPredicted RBP19.08■□□□□ 0.65
RXRB-201ENST00000374680 ARHGAP25P42331 645 aa19.08■□□□□ 0.65
RXRB-201ENST00000374680 CT47A1Q5JQC4 288 aaPredicted RBP19.08■□□□□ 0.65
RXRB-201ENST00000374680 CC2D1AQ6P1N0 951 aaPredicted RBP19.08■□□□□ 0.65
RXRB-201ENST00000374680 KIAA1328Q86T90 577 aa19.08■□□□□ 0.65
RXRB-201ENST00000374680 ZSCAN29Q8IWY8 852 aaPredicted RBP19.08■□□□□ 0.65
RXRB-201ENST00000374680 P2RX5Q93086 422 aa19.08■□□□□ 0.65
RXRB-201ENST00000374680 SPZ1Q9BXG8 430 aa19.08■□□□□ 0.65
RXRB-201ENST00000374680 CDC23Q9UJX2 597 aa19.08■□□□□ 0.65
RXRB-201ENST00000374680 COL5A3P25940 1745 aaPredicted RBP19.08■□□□□ 0.64
RXRB-201ENST00000374680 MYMKA6NI61 221 aa19.08■□□□□ 0.64
RXRB-201ENST00000374680 LGALS16A8MUM7 142 aa19.08■□□□□ 0.64
RXRB-201ENST00000374680 USP17L10C9JJH3 530 aa19.08■□□□□ 0.64
RXRB-201ENST00000374680 RHOBTB3O94955 611 aa19.08■□□□□ 0.64
RXRB-201ENST00000374680 ENOX2Q16206 610 aaKnown RBP19.08■□□□□ 0.64
RXRB-201ENST00000374680 CCDC122Q5T0U0 273 aa19.08■□□□□ 0.64
RXRB-201ENST00000374680 GDAP1L1Q96MZ0 367 aa19.08■□□□□ 0.64
RXRB-201ENST00000374680 SNED1Q8TER0 1413 aa19.08■□□□□ 0.64
RXRB-201ENST00000374680 USP17L15C9J2P7 530 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 USP17L13C9JLJ4 530 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 USP17L11C9JVI0 530 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 USP17L18D6R9N7 530 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 USP17L22D6RA61 530 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 USP17L17D6RBQ6 530 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 USP17L19D6RCP7 530 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 USP17L20D6RJB6 530 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 USP17L24Q0WX57 530 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 WDR59Q6PJI9 974 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 USP17L6PQ6QN14 398 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 KIAA0825Q8IV33 1275 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 KIAA0895Q8NCT3 520 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 SNX29Q8TEQ0 813 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 PNKPQ96T60 521 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 ARFGAP3Q9NP61 516 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 IL1R1P14778 569 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 MRPS25P82663 173 aaKnown RBP19.07■□□□□ 0.64
RXRB-201ENST00000374680 RSRC2Q7L4I2 434 aaKnown RBP19.07■□□□□ 0.64
RXRB-201ENST00000374680 SRGAP1Q7Z6B7 1085 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 GPR161Q8N6U8 529 aaKnown RBP19.07■□□□□ 0.64
RXRB-201ENST00000374680 PSMB7Q99436 277 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 MMRN2Q9H8L6 949 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 ZMYND10O75800 440 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 ZRANB2O95218 330 aaKnown RBP eCLIP19.07■□□□□ 0.64
RXRB-201ENST00000374680 TBC1D8O95759 1140 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 ADCY7P51828 1080 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 SV2BQ7L1I2 683 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 ADGRF4Q8IZF3 695 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 NOA1Q8NC60 698 aaKnown RBP19.07■□□□□ 0.64
RXRB-201ENST00000374680 SMCR8Q8TEV9 937 aaPredicted RBP19.07■□□□□ 0.64
RXRB-201ENST00000374680 CCDC47Q96A33 483 aaKnown RBP19.07■□□□□ 0.64
RXRB-201ENST00000374680 NAPGQ99747 312 aaPredicted RBP19.07■□□□□ 0.64
RXRB-201ENST00000374680 SEMA6BQ9H3T3 888 aa19.07■□□□□ 0.64
RXRB-201ENST00000374680 FAM170AA1A519 330 aa19.06■□□□□ 0.64
RXRB-201ENST00000374680 RCCD1A6NED2 376 aa19.06■□□□□ 0.64
RXRB-201ENST00000374680 PLCG2P16885 1265 aa19.06■□□□□ 0.64
RXRB-201ENST00000374680 GRB10Q13322 594 aa19.06■□□□□ 0.64
RXRB-201ENST00000374680 TMED8Q6PL24 325 aaPredicted RBP19.06■□□□□ 0.64
RXRB-201ENST00000374680 TANGO6Q9C0B7 1094 aa19.06■□□□□ 0.64
RXRB-201ENST00000374680 LACRTQ9GZZ8 138 aa19.06■□□□□ 0.64
RXRB-201ENST00000374680 PPP1R11O60927 126 aaPredicted RBP19.06■□□□□ 0.64
RXRB-201ENST00000374680 ECM1Q16610 540 aa19.06■□□□□ 0.64
RXRB-201ENST00000374680 DAGLBQ8NCG7 672 aa19.06■□□□□ 0.64
RXRB-201ENST00000374680 LZTS2Q9BRK4 669 aa19.06■□□□□ 0.64
RXRB-201ENST00000374680 CCDC88AQ3V6T2 1871 aa19.05■□□□□ 0.64
RXRB-201ENST00000374680 BBOX1O75936 387 aa19.05■□□□□ 0.64
RXRB-201ENST00000374680 GALNT17Q6IS24 598 aa19.05■□□□□ 0.64
RXRB-201ENST00000374680 ANKRD13CQ8N6S4 541 aa19.05■□□□□ 0.64
RXRB-201ENST00000374680 ZNF622Q969S3 477 aaKnown RBP eCLIP19.05■□□□□ 0.643e-6■■■□□ 15.4
RXRB-201ENST00000374680 RREB1Q92766 1687 aa19.05■□□□□ 0.64
RXRB-201ENST00000374680 AFF2P51816 1311 aa19.05■□□□□ 0.64
RXRB-201ENST00000374680 ITIH6Q6UXX5 1313 aa19.05■□□□□ 0.64
RXRB-201ENST00000374680 RASSF10A6NK89 507 aa19.05■□□□□ 0.64
RXRB-201ENST00000374680 PPEF1O14829 653 aaPredicted RBP19.05■□□□□ 0.64
RXRB-201ENST00000374680 EPHB6O15197 1021 aa19.05■□□□□ 0.64
RXRB-201ENST00000374680 EDIL3O43854 480 aa19.05■□□□□ 0.64
RXRB-201ENST00000374680 CCNE1P24864 410 aa19.05■□□□□ 0.64
RXRB-201ENST00000374680 NELFCDQ8IXH7 590 aa19.05■□□□□ 0.64
RXRB-201ENST00000374680 ZNF507Q8TCN5 953 aa19.05■□□□□ 0.64
RXRB-201ENST00000374680 CCDC51Q96ER9 411 aa19.05■□□□□ 0.64
RXRB-201ENST00000374680 JMJD4Q9H9V9 463 aa19.05■□□□□ 0.64
RXRB-201ENST00000374680 BLOC1S4Q9NUP1 217 aa19.05■□□□□ 0.64
RXRB-201ENST00000374680 SERPINB13Q9UIV8 391 aa19.05■□□□□ 0.64
RXRB-201ENST00000374680 NPHP3-ACAD11A0A0J9YXS1 232 aa19.04■□□□□ 0.64
RXRB-201ENST00000374680 KCNB1Q14721 858 aa19.04■□□□□ 0.64
RXRB-201ENST00000374680 PNMA5Q96PV4 448 aa19.04■□□□□ 0.64
RXRB-201ENST00000374680 DNA2P51530 1060 aa19.04■□□□□ 0.64
RXRB-201ENST00000374680 HERVK_113P62684 666 aa19.04■□□□□ 0.64
RXRB-201ENST00000374680 CRY2Q49AN0 593 aa19.04■□□□□ 0.64
RXRB-201ENST00000374680 RABGGTAQ92696 567 aa19.04■□□□□ 0.64
RXRB-201ENST00000374680 BTAF1O14981 1849 aa19.04■□□□□ 0.64
RXRB-201ENST00000374680 ZNF185O15231 689 aa19.04■□□□□ 0.64
RXRB-201ENST00000374680 PHACTR2O75167 634 aa19.04■□□□□ 0.64
RXRB-201ENST00000374680 ATP1A1P05023 1023 aaKnown RBP19.04■□□□□ 0.64
RXRB-201ENST00000374680 IKQ13123 557 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms