RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 EIF4A3P38919 411 aaKnown RBP19.15■□□□□ 0.66
PTPRU-202ENST00000373779 SMTNP53814 917 aa19.15■□□□□ 0.66
PTPRU-202ENST00000373779 SGMS1Q86VZ5 419 aa19.15■□□□□ 0.66
PTPRU-202ENST00000373779 VEZTQ9HBM0 779 aa19.15■□□□□ 0.66
PTPRU-202ENST00000373779 EPB41L5Q9HCM4 733 aa19.15■□□□□ 0.66
PTPRU-202ENST00000373779 RIC8AQ9NPQ8 531 aa19.15■□□□□ 0.66
PTPRU-202ENST00000373779 PCDHA13Q9Y5I0 950 aa19.15■□□□□ 0.66
PTPRU-202ENST00000373779 CXCR5P32302 372 aa19.15■□□□□ 0.66
PTPRU-202ENST00000373779 PNMA8AQ86V59 439 aaPredicted RBP19.15■□□□□ 0.66
PTPRU-202ENST00000373779 ZNF710Q8N1W2 664 aa19.15■□□□□ 0.66
PTPRU-202ENST00000373779 TEX33O43247 280 aa19.15■□□□□ 0.66
PTPRU-202ENST00000373779 ATP2A2P16615 1042 aaKnown RBP19.15■□□□□ 0.66
PTPRU-202ENST00000373779 DPP8Q6V1X1 898 aaPredicted RBP19.15■□□□□ 0.66
PTPRU-202ENST00000373779 MAEAQ7L5Y9 396 aa19.15■□□□□ 0.66
PTPRU-202ENST00000373779 STK17AQ9UEE5 414 aa19.15■□□□□ 0.66
PTPRU-202ENST00000373779 CLTCQ00610 1675 aaKnown RBP19.15■□□□□ 0.66
PTPRU-202ENST00000373779 CCDC169A6NNP5 214 aa19.15■□□□□ 0.66
PTPRU-202ENST00000373779 METTL14Q9HCE5 456 aaKnown RBP19.15■□□□□ 0.66
PTPRU-202ENST00000373779 EXOC7Q9UPT5 735 aa19.15■□□□□ 0.66
PTPRU-202ENST00000373779 LOC102724428A0A0B4J2F2 783 aa19.14■□□□□ 0.66
PTPRU-202ENST00000373779 SIK1P57059 783 aa19.14■□□□□ 0.66
PTPRU-202ENST00000373779 HLFQ16534 295 aa19.14■□□□□ 0.66
PTPRU-202ENST00000373779 ARHGEF10LQ9HCE6 1279 aa19.14■□□□□ 0.66
PTPRU-202ENST00000373779 AK9Q5TCS8 1911 aa19.14■□□□□ 0.66
PTPRU-202ENST00000373779 PRR16Q569H4 304 aa19.14■□□□□ 0.65
PTPRU-202ENST00000373779 TBCKQ8TEA7 893 aa19.14■□□□□ 0.65
PTPRU-202ENST00000373779 PIGBQ92521 554 aa19.14■□□□□ 0.65
PTPRU-202ENST00000373779 WDR24Q96S15 920 aa19.14■□□□□ 0.65
PTPRU-202ENST00000373779 RNF14Q9UBS8 474 aa19.14■□□□□ 0.65
PTPRU-202ENST00000373779 CEP83Q9Y592 693 aa19.14■□□□□ 0.65
PTPRU-202ENST00000373779 BIRC3Q13489 604 aa19.14■□□□□ 0.65
PTPRU-202ENST00000373779 SCARF1Q14162 830 aa19.14■□□□□ 0.65
PTPRU-202ENST00000373779 FNBP1Q96RU3 617 aa19.14■□□□□ 0.65
PTPRU-202ENST00000373779 FERMT1Q9BQL6 677 aa19.14■□□□□ 0.65
PTPRU-202ENST00000373779 CPDO75976 1380 aa19.14■□□□□ 0.65
PTPRU-202ENST00000373779 LGALS16A8MUM7 142 aa19.14■□□□□ 0.65
PTPRU-202ENST00000373779 CTDNEP1O95476 244 aa19.14■□□□□ 0.65
PTPRU-202ENST00000373779 LRRC41Q15345 812 aa19.14■□□□□ 0.65
PTPRU-202ENST00000373779 TPH2Q8IWU9 490 aa19.14■□□□□ 0.65
PTPRU-202ENST00000373779 PAF1Q8N7H5 531 aa19.14■□□□□ 0.65
PTPRU-202ENST00000373779 MTA3Q9BTC8 594 aa19.14■□□□□ 0.65
PTPRU-202ENST00000373779 BZW2Q9Y6E2 419 aaKnown RBP19.14■□□□□ 0.65
PTPRU-202ENST00000373779 ARHGEF28Q8N1W1 1705 aaKnown RBP19.14■□□□□ 0.65
PTPRU-202ENST00000373779 CD163L1Q9NR16 1453 aa19.14■□□□□ 0.65
PTPRU-202ENST00000373779 KIF11P52732 1056 aa19.14■□□□□ 0.65
PTPRU-202ENST00000373779 SF3B2Q13435 895 aaKnown RBP19.14■□□□□ 0.65
PTPRU-202ENST00000373779 RBM26Q5T8P6 1007 aaKnown RBP19.14■□□□□ 0.65
PTPRU-202ENST00000373779 BRIP1Q9BX63 1249 aa19.14■□□□□ 0.65
PTPRU-202ENST00000373779 SH2D4AQ9H788 454 aa19.14■□□□□ 0.65
PTPRU-202ENST00000373779 MAP2P11137 1827 aaKnown RBP19.13■□□□□ 0.65
PTPRU-202ENST00000373779 EXOC3L4Q17RC7 722 aa19.13■□□□□ 0.65
PTPRU-202ENST00000373779 LIN9Q5TKA1 542 aa19.13■□□□□ 0.65
PTPRU-202ENST00000373779 UTYO14607 1347 aa19.13■□□□□ 0.65
PTPRU-202ENST00000373779 SF3A3Q12874 501 aaKnown RBP eCLIP19.13■□□□□ 0.65
PTPRU-202ENST00000373779 ISCA1Q9BUE6 129 aa19.13■□□□□ 0.65
PTPRU-202ENST00000373779 CDHR2Q9BYE9 1310 aa19.13■□□□□ 0.65
PTPRU-202ENST00000373779 FAM184BQ9ULE4 1060 aa19.13■□□□□ 0.65
PTPRU-202ENST00000373779 KIAA1024Q9UPX6 916 aa19.13■□□□□ 0.65
PTPRU-202ENST00000373779 CYP2J2P51589 502 aa19.13■□□□□ 0.65
PTPRU-202ENST00000373779 FKBP3Q00688 224 aaKnown RBP19.13■□□□□ 0.65
PTPRU-202ENST00000373779 GKAP1Q5VSY0 366 aaPredicted RBP19.13■□□□□ 0.65
PTPRU-202ENST00000373779 NYAP1Q6ZVC0 841 aa19.12■□□□□ 0.65
PTPRU-202ENST00000373779 CEMIPQ8WUJ3 1361 aa19.12■□□□□ 0.65
PTPRU-202ENST00000373779 FAM170AA1A519 330 aa19.12■□□□□ 0.65
PTPRU-202ENST00000373779 DDX39AO00148 427 aaKnown RBP19.12■□□□□ 0.65
PTPRU-202ENST00000373779 NDST4Q9H3R1 872 aa19.12■□□□□ 0.65
PTPRU-202ENST00000373779 STAMBPO95630 424 aa19.12■□□□□ 0.65
PTPRU-202ENST00000373779 WDR78Q5VTH9 848 aa19.12■□□□□ 0.65
PTPRU-202ENST00000373779 MCTP2Q6DN12 878 aa19.12■□□□□ 0.65
PTPRU-202ENST00000373779 RDH13Q8NBN7 331 aa19.12■□□□□ 0.65
PTPRU-202ENST00000373779 SH3GLB2Q9NR46 395 aa19.12■□□□□ 0.65
PTPRU-202ENST00000373779 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.12■□□□□ 0.65
PTPRU-202ENST00000373779 USP40Q9NVE5 1235 aa19.12■□□□□ 0.65
PTPRU-202ENST00000373779 COL4A3BPQ9Y5P4 624 aa19.12■□□□□ 0.65
PTPRU-202ENST00000373779 CFBP00751 764 aa19.12■□□□□ 0.65
PTPRU-202ENST00000373779 CLNS1AP54105 237 aaKnown RBP19.12■□□□□ 0.65
PTPRU-202ENST00000373779 ENGASEQ8NFI3 743 aa19.12■□□□□ 0.65
PTPRU-202ENST00000373779 SMC6Q96SB8 1091 aa19.12■□□□□ 0.65
PTPRU-202ENST00000373779 ZCCHC17Q9NP64 241 aaKnown RBP19.12■□□□□ 0.65
PTPRU-202ENST00000373779 TUBE1Q9UJT0 475 aa19.12■□□□□ 0.65
PTPRU-202ENST00000373779 FBXO2Q9UK22 296 aaPredicted RBP19.12■□□□□ 0.65
PTPRU-202ENST00000373779 ITSN1Q15811 1721 aa19.11■□□□□ 0.65
PTPRU-202ENST00000373779 A0A087WUV0 522 aaPredicted RBP19.11■□□□□ 0.65
PTPRU-202ENST00000373779 TRIM49BA6NDI0 452 aa19.11■□□□□ 0.65
PTPRU-202ENST00000373779 SMCR8Q8TEV9 937 aaPredicted RBP19.11■□□□□ 0.65
PTPRU-202ENST00000373779 FAM212AQ96EL1 285 aa19.11■□□□□ 0.65
PTPRU-202ENST00000373779 SUSD4Q5VX71 490 aa19.11■□□□□ 0.65
PTPRU-202ENST00000373779 ALS2CLQ60I27 953 aa19.11■□□□□ 0.65
PTPRU-202ENST00000373779 FDPSP14324 419 aaKnown RBP19.11■□□□□ 0.65
PTPRU-202ENST00000373779 MAP2K2P36507 400 aa19.11■□□□□ 0.65
PTPRU-202ENST00000373779 TCP10Q12799 353 aa19.11■□□□□ 0.65
PTPRU-202ENST00000373779 SYNE4Q8N205 404 aa19.11■□□□□ 0.65
PTPRU-202ENST00000373779 GTF2IP78347 998 aa19.11■□□□□ 0.65
PTPRU-202ENST00000373779 NBPF26B4DH59 902 aa19.11■□□□□ 0.65
PTPRU-202ENST00000373779 FTCDO95954 541 aa19.11■□□□□ 0.65
PTPRU-202ENST00000373779 PRCPP42785 496 aa19.11■□□□□ 0.65
PTPRU-202ENST00000373779 NBPF10Q6P3W6 841 aaKnown RBP19.11■□□□□ 0.65
PTPRU-202ENST00000373779 RBM43Q6ZSC3 357 aaKnown RBP19.11■□□□□ 0.65
PTPRU-202ENST00000373779 NBPF15Q8N660 670 aa19.11■□□□□ 0.65
PTPRU-202ENST00000373779 SRGAP2O75044 1071 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms