RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 ZNF76P36508 570 aa13.4□□□□□ -0.27
NCDN-202ENST00000373243 CACNB1Q02641 598 aaPredicted RBP13.4□□□□□ -0.27
NCDN-202ENST00000373243 IFFO1Q0D2I5 559 aa13.4□□□□□ -0.27
NCDN-202ENST00000373243 LRP10Q7Z4F1 713 aa13.4□□□□□ -0.27
NCDN-202ENST00000373243 ZNF579Q8NAF0 562 aaKnown RBP13.4□□□□□ -0.27
NCDN-202ENST00000373243 FAXDC2Q96IV6 333 aa13.4□□□□□ -0.27
NCDN-202ENST00000373243 GPR101Q96P66 508 aaPredicted RBP13.4□□□□□ -0.27
NCDN-202ENST00000373243 KANSL2Q9H9L4 492 aa13.4□□□□□ -0.27
NCDN-202ENST00000373243 ZNF287Q9HBT7 754 aa13.4□□□□□ -0.27
NCDN-202ENST00000373243 RWDD2AQ9UIY3 292 aa13.4□□□□□ -0.27
NCDN-202ENST00000373243 WDR19Q8NEZ3 1342 aa13.39□□□□□ -0.27
NCDN-202ENST00000373243 STK36Q9NRP7 1315 aa13.39□□□□□ -0.27
NCDN-202ENST00000373243 CHUKO15111 745 aa13.39□□□□□ -0.27
NCDN-202ENST00000373243 PPP1R12BO60237 982 aaPredicted RBP13.39□□□□□ -0.27
NCDN-202ENST00000373243 TUBBP07437 444 aa13.39□□□□□ -0.27
NCDN-202ENST00000373243 RASSF7Q02833 373 aa13.39□□□□□ -0.27
NCDN-202ENST00000373243 TUBB2AQ13885 445 aa13.39□□□□□ -0.27
NCDN-202ENST00000373243 NONOQ15233 471 aaKnown RBP eCLIP13.39□□□□□ -0.27
NCDN-202ENST00000373243 PARP10Q53GL7 1025 aa13.39□□□□□ -0.27
NCDN-202ENST00000373243 TMTC3Q6ZXV5 915 aa13.39□□□□□ -0.27
NCDN-202ENST00000373243 ARMC2Q8NEN0 867 aa13.39□□□□□ -0.27
NCDN-202ENST00000373243 SNX29Q8TEQ0 813 aa13.39□□□□□ -0.27
NCDN-202ENST00000373243 NGLY1Q96IV0 654 aa13.39□□□□□ -0.27
NCDN-202ENST00000373243 MMS19Q96T76 1030 aa13.39□□□□□ -0.27
NCDN-202ENST00000373243 TUBB2BQ9BVA1 445 aa13.39□□□□□ -0.27
NCDN-202ENST00000373243 AGPAT5Q9NUQ2 364 aa13.39□□□□□ -0.27
NCDN-202ENST00000373243 SMARCAL1Q9NZC9 954 aa13.39□□□□□ -0.27
NCDN-202ENST00000373243 FRMPD2Q68DX3 1309 aaPredicted RBP13.39□□□□□ -0.27
NCDN-202ENST00000373243 RPS8P62241 208 aaKnown RBP13.39□□□□□ -0.27
NCDN-202ENST00000373243 GNGT1P63211 74 aa13.39□□□□□ -0.27
NCDN-202ENST00000373243 TRIM28Q13263 835 aaKnown RBP13.39□□□□□ -0.27
NCDN-202ENST00000373243 ERFEQ4G0M1 354 aa13.39□□□□□ -0.27
NCDN-202ENST00000373243 ZFYVE27Q5T4F4 411 aa13.39□□□□□ -0.27
NCDN-202ENST00000373243 STAG2Q8N3U4 1231 aa13.39□□□□□ -0.27
NCDN-202ENST00000373243 MB21D1Q8N884 522 aa13.39□□□□□ -0.27
NCDN-202ENST00000373243 NHEJ1Q9H9Q4 299 aaPredicted RBP13.39□□□□□ -0.27
NCDN-202ENST00000373243 CYP19A1P11511 503 aaPredicted RBP13.38□□□□□ -0.27
NCDN-202ENST00000373243 PLCG1P19174 1290 aa13.38□□□□□ -0.27
NCDN-202ENST00000373243 KLK7P49862 253 aa13.38□□□□□ -0.27
NCDN-202ENST00000373243 TUBB4BP68371 445 aa13.38□□□□□ -0.27
NCDN-202ENST00000373243 RBBP5Q15291 538 aaKnown RBP13.38□□□□□ -0.27
NCDN-202ENST00000373243 ZNF219Q9P2Y4 722 aaPredicted RBP13.38□□□□□ -0.27
NCDN-202ENST00000373243 KIF4AO95239 1232 aa13.38□□□□□ -0.27
NCDN-202ENST00000373243 ERVK-24P63145 666 aa13.38□□□□□ -0.27
NCDN-202ENST00000373243 SNX1Q13596 522 aa13.38□□□□□ -0.27
NCDN-202ENST00000373243 ZKSCAN8Q15776 578 aaPredicted RBP13.38□□□□□ -0.27
NCDN-202ENST00000373243 DCAF17Q5H9S7 520 aaPredicted RBP13.38□□□□□ -0.27
NCDN-202ENST00000373243 USP17L2Q6R6M4 530 aa13.38□□□□□ -0.27
NCDN-202ENST00000373243 SPDL1Q96EA4 605 aa13.38□□□□□ -0.27
NCDN-202ENST00000373243 PIK3C2AO00443 1686 aa13.38□□□□□ -0.27
NCDN-202ENST00000373243 UBAP1LF5GYI3 381 aa13.38□□□□□ -0.27
NCDN-202ENST00000373243 OPA1O60313 960 aa13.38□□□□□ -0.27
NCDN-202ENST00000373243 GNA11P29992 359 aa13.38□□□□□ -0.27
NCDN-202ENST00000373243 MECOMQ03112 1051 aa13.38□□□□□ -0.27
NCDN-202ENST00000373243 ALX1Q15699 326 aa13.38□□□□□ -0.27
NCDN-202ENST00000373243 EHD4Q9H223 541 aa13.38□□□□□ -0.27
NCDN-202ENST00000373243 MLXIPQ9HAP2 919 aa13.38□□□□□ -0.27
NCDN-202ENST00000373243 DUSP10Q9Y6W6 482 aa13.38□□□□□ -0.27
NCDN-202ENST00000373243 TLDC2A0PJX2 215 aa13.37□□□□□ -0.27
NCDN-202ENST00000373243 VEGFAP15692 232 aaPredicted RBP13.37□□□□□ -0.27
NCDN-202ENST00000373243 IL6STP40189 918 aaPredicted RBP13.37□□□□□ -0.27
NCDN-202ENST00000373243 DPYDQ12882 1025 aa13.37□□□□□ -0.27
NCDN-202ENST00000373243 HSD3B7Q9H2F3 369 aa13.37□□□□□ -0.27
NCDN-202ENST00000373243 LOC102724428A0A0B4J2F2 783 aa13.37□□□□□ -0.27
NCDN-202ENST00000373243 PPP1R3GB7ZBB8 358 aa13.37□□□□□ -0.27
NCDN-202ENST00000373243 ZNF18P17022 549 aa13.37□□□□□ -0.27
NCDN-202ENST00000373243 SIK1P57059 783 aa13.37□□□□□ -0.27
NCDN-202ENST00000373243 CNNM4Q6P4Q7 775 aa13.37□□□□□ -0.27
NCDN-202ENST00000373243 ZKSCAN4Q969J2 545 aaPredicted RBP13.37□□□□□ -0.27
NCDN-202ENST00000373243 CCDC43Q96MW1 224 aaKnown RBP13.37□□□□□ -0.27
NCDN-202ENST00000373243 SH3GL3Q99963 347 aa13.37□□□□□ -0.27
NCDN-202ENST00000373243 DISC1Q9NRI5 854 aa13.37□□□□□ -0.27
NCDN-202ENST00000373243 ETAA1Q9NY74 926 aa13.37□□□□□ -0.27
NCDN-202ENST00000373243 RIMBP2O15034 1052 aa13.37□□□□□ -0.27
NCDN-202ENST00000373243 NCK2O43639 380 aa13.37□□□□□ -0.27
NCDN-202ENST00000373243 LDHCP07864 332 aa13.37□□□□□ -0.27
NCDN-202ENST00000373243 FCER1AP12319 257 aa13.37□□□□□ -0.27
NCDN-202ENST00000373243 HERC4Q5GLZ8 1057 aaPredicted RBP13.37□□□□□ -0.27
NCDN-202ENST00000373243 PARD3BQ8TEW8 1205 aa13.37□□□□□ -0.27
NCDN-202ENST00000373243 ESYT3A0FGR9 886 aa13.36□□□□□ -0.27
NCDN-202ENST00000373243 EME2A4GXA9 379 aaPredicted RBP13.36□□□□□ -0.27
NCDN-202ENST00000373243 WNT7AO00755 349 aa13.36□□□□□ -0.27
NCDN-202ENST00000373243 LONP1P36776 959 aaKnown RBP13.36□□□□□ -0.27
NCDN-202ENST00000373243 GGCXP38435 758 aa13.36□□□□□ -0.27
NCDN-202ENST00000373243 EIF4A3P38919 411 aaKnown RBP13.36□□□□□ -0.27
NCDN-202ENST00000373243 ADGRA1Q86SQ6 560 aa13.36□□□□□ -0.27
NCDN-202ENST00000373243 KLHL33A6NCF5 533 aa13.36□□□□□ -0.27
NCDN-202ENST00000373243 OR52Z1P0C646 297 aa13.36□□□□□ -0.27
NCDN-202ENST00000373243 RASGRP2Q7LDG7 609 aa13.36□□□□□ -0.27
NCDN-202ENST00000373243 LRRC47Q8N1G4 583 aaKnown RBP13.36□□□□□ -0.27
NCDN-202ENST00000373243 CELF1Q92879 486 aaKnown RBP13.36□□□□□ -0.27
NCDN-202ENST00000373243 P2RX5Q93086 422 aa13.36□□□□□ -0.27
NCDN-202ENST00000373243 ABCC12Q96J65 1359 aa13.36□□□□□ -0.27
NCDN-202ENST00000373243 MST1RQ04912 1400 aa13.36□□□□□ -0.27
NCDN-202ENST00000373243 FTCDO95954 541 aa13.36□□□□□ -0.27
NCDN-202ENST00000373243 GUCY2DQ02846 1103 aa13.36□□□□□ -0.27
NCDN-202ENST00000373243 EVX2Q03828 476 aa13.36□□□□□ -0.27
NCDN-202ENST00000373243 EHHADHQ08426 723 aa13.36□□□□□ -0.27
NCDN-202ENST00000373243 CALCRLQ16602 461 aa13.36□□□□□ -0.27
NCDN-202ENST00000373243 BEND6Q5SZJ8 279 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms