RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 PARP3Q9Y6F1 533 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 SYNRGQ9UMZ2 1314 aa7.21□□□□□ -1.25
CHD6-202ENST00000373222 HOXA2O43364 376 aa7.21□□□□□ -1.25
CHD6-202ENST00000373222 SEC31AO94979 1220 aaKnown RBP7.21□□□□□ -1.25
CHD6-202ENST00000373222 FGRP09769 529 aa7.21□□□□□ -1.25
CHD6-202ENST00000373222 SLFN14P0C7P3 912 aa7.21□□□□□ -1.25
CHD6-202ENST00000373222 SCG2P13521 617 aa7.21□□□□□ -1.25
CHD6-202ENST00000373222 NLRP5P59047 1200 aa7.21□□□□□ -1.25
CHD6-202ENST00000373222 NR1I3Q14994 352 aa7.21□□□□□ -1.25
CHD6-202ENST00000373222 SPECC1LQ69YQ0 1117 aa7.21□□□□□ -1.25
CHD6-202ENST00000373222 CLEC4GQ6UXB4 293 aa7.21□□□□□ -1.25
CHD6-202ENST00000373222 RAD9BQ6WBX8 426 aa7.21□□□□□ -1.25
CHD6-202ENST00000373222 SH3RF1Q7Z6J0 888 aa7.21□□□□□ -1.25
CHD6-202ENST00000373222 CLEC10AQ8IUN9 316 aa7.21□□□□□ -1.25
CHD6-202ENST00000373222 MAPKAPK5Q8IW41 473 aa7.21□□□□□ -1.25
CHD6-202ENST00000373222 ENOX1Q8TC92 643 aaKnown RBP7.21□□□□□ -1.25
CHD6-202ENST00000373222 TGFBRAP1Q8WUH2 860 aa7.21□□□□□ -1.25
CHD6-202ENST00000373222 NLRP3Q96P20 1036 aa7.21□□□□□ -1.25
CHD6-202ENST00000373222 TMEM60Q9H2L4 133 aa7.21□□□□□ -1.25
CHD6-202ENST00000373222 LZTFL1Q9NQ48 299 aa7.21□□□□□ -1.25
CHD6-202ENST00000373222 ANKIB1Q9P2G1 1089 aa7.21□□□□□ -1.25
CHD6-202ENST00000373222 DDX41Q9UJV9 622 aaKnown RBP7.21□□□□□ -1.25
CHD6-202ENST00000373222 TFR2Q9UP52 801 aa7.21□□□□□ -1.25
CHD6-202ENST00000373222 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.21□□□□□ -1.255e-7■■■■□ 24.5
CHD6-202ENST00000373222 IRS2Q9Y4H2 1338 aa7.21□□□□□ -1.26
CHD6-202ENST00000373222 SPTLC1O15269 473 aa7.21□□□□□ -1.26
CHD6-202ENST00000373222 LILRB3O75022 631 aa7.21□□□□□ -1.26
CHD6-202ENST00000373222 FXR1P51114 621 aaKnown RBP eCLIP7.21□□□□□ -1.26
CHD6-202ENST00000373222 PMS1P54277 932 aaKnown RBP7.21□□□□□ -1.26
CHD6-202ENST00000373222 TBX4P57082 545 aa7.21□□□□□ -1.26
CHD6-202ENST00000373222 ARHGAP29Q52LW3 1261 aa7.21□□□□□ -1.26
CHD6-202ENST00000373222 PPP1R18Q6NYC8 613 aa7.21□□□□□ -1.26
CHD6-202ENST00000373222 METTL3Q86U44 580 aaKnown RBP7.21□□□□□ -1.26
CHD6-202ENST00000373222 DZIP1Q86YF9 867 aaKnown RBP7.21□□□□□ -1.26
CHD6-202ENST00000373222 SMAP1Q8IYB5 467 aaPredicted RBP7.21□□□□□ -1.26
CHD6-202ENST00000373222 MLKLQ8NB16 471 aa7.21□□□□□ -1.26
CHD6-202ENST00000373222 CTCFLQ8NI51 663 aaPredicted RBP7.21□□□□□ -1.26
CHD6-202ENST00000373222 ERO1AQ96HE7 468 aa7.21□□□□□ -1.26
CHD6-202ENST00000373222 VPS16Q9H269 839 aa7.21□□□□□ -1.26
CHD6-202ENST00000373222 THRAP3Q9Y2W1 955 aaKnown RBP7.21□□□□□ -1.26
CHD6-202ENST00000373222 A0A1B0GTH6 734 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 CBFA2T2O43439 604 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 CASP14P31944 242 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 RHBDL3P58872 404 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 GNG11P61952 73 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 MAP3K9P80192 1104 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 ATP2C1P98194 919 aaPredicted RBP7.2□□□□□ -1.26
CHD6-202ENST00000373222 INF2Q27J81 1249 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 TUSC1Q2TAM9 212 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 C4orf46Q504U0 113 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 PDXDC2PQ6P474 469 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 PNMA1Q8ND90 353 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 WNT2BQ93097 391 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 ARMC5Q96C12 935 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 ASB16Q96NS5 453 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 UIMC1Q96RL1 719 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 CRNKL1Q9BZJ0 848 aaKnown RBP7.2□□□□□ -1.26
CHD6-202ENST00000373222 ACBD3Q9H3P7 528 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 MKRN1Q9UHC7 482 aaKnown RBP7.2□□□□□ -1.26
CHD6-202ENST00000373222 NARFQ9UHQ1 456 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 STX8Q9UNK0 236 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 TAF1LQ8IZX4 1826 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 NAV1Q8NEY1 1877 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 ZPR1O75312 459 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 GYPCP04921 128 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 DNAJA1P31689 397 aaKnown RBP7.2□□□□□ -1.26
CHD6-202ENST00000373222 USP5P45974 858 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 PFKFB3Q16875 520 aaPredicted RBP7.2□□□□□ -1.26
CHD6-202ENST00000373222 WWC2Q6AWC2 1192 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 IGSF22Q8N9C0 903 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 ACRBPQ8NEB7 543 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 TMC2Q8TDI7 906 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 HPS3Q969F9 1004 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 NGLY1Q96IV0 654 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 TAB2Q9NYJ8 693 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 CGNQ9P2M7 1197 aaKnown RBP7.2□□□□□ -1.26
CHD6-202ENST00000373222 ADD3Q9UEY8 706 aaKnown RBP7.2□□□□□ -1.26
CHD6-202ENST00000373222 MAD2L2Q9UI95 211 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 CCNL1Q9UK58 526 aaPredicted RBP7.2□□□□□ -1.26
CHD6-202ENST00000373222 CEP131Q9UPN4 1083 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 COL24A1Q17RW2 1714 aa7.2□□□□□ -1.26
CHD6-202ENST00000373222 DDX60LQ5H9U9 1706 aaKnown RBP7.19□□□□□ -1.26
CHD6-202ENST00000373222 ARHGAP6O43182 974 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 ORC4O43929 436 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 DDAH1O94760 285 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 XBP1P17861 261 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 DMTNQ08495 405 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 SYCP1Q15431 976 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 SLC10A5Q5PT55 438 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 CDKAL1Q5VV42 579 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 RRAGBQ5VZM2 374 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 RSBN1LQ6PCB5 846 aaPredicted RBP7.19□□□□□ -1.26
CHD6-202ENST00000373222 HEATR3Q7Z4Q2 680 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 C11orf96Q7Z7L8 435 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 C4orf32Q8N8J7 132 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 ZNF397Q8NF99 534 aaPredicted RBP7.19□□□□□ -1.26
CHD6-202ENST00000373222 SMARCC1Q92922 1105 aaPredicted RBP7.19□□□□□ -1.26
CHD6-202ENST00000373222 VAT1LQ9HCJ6 419 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 MYH10P35580 1976 aa7.19□□□□□ -1.26
CHD6-202ENST00000373222 HMGB1P1B2RPK0 211 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms