RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 MDM2Q00987 491 aaPredicted RBP12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 ATP2B2Q01814 1243 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 RAD51AP2Q09MP3 1159 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 TRDNQ13061 729 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 TRIM29Q14134 588 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 SPRYD7Q5W111 196 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 KRT40Q6A162 431 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 TMEM179Q6ZVK1 233 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 CHST3Q7LGC8 479 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 SRGAP1Q7Z6B7 1085 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 MSANTD4Q8NCY6 345 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 WASF1Q92558 559 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 CCDC34Q96HJ3 373 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 WNK4Q96J92 1243 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 GBP3Q9H0R5 595 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 INTS13Q9NVM9 706 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 PCDHA5Q9Y5H7 936 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 NID2Q14112 1375 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 FAM155AB1AL88 458 aaPredicted RBP12.9□□□□□ -0.34
TSPAN1-201ENST00000372003 POLR3GO15318 223 aaPredicted RBP12.9□□□□□ -0.34
TSPAN1-201ENST00000372003 AOC2O75106 756 aa12.9□□□□□ -0.34
TSPAN1-201ENST00000372003 SLC10A3P09131 477 aa12.9□□□□□ -0.34
TSPAN1-201ENST00000372003 VEGFBP49765 207 aa12.9□□□□□ -0.34
TSPAN1-201ENST00000372003 PPATQ06203 517 aa12.9□□□□□ -0.34
TSPAN1-201ENST00000372003 SPP2Q13103 211 aa12.9□□□□□ -0.34
TSPAN1-201ENST00000372003 PNOCQ13519 176 aa12.9□□□□□ -0.34
TSPAN1-201ENST00000372003 ZSCAN26Q16670 478 aa12.9□□□□□ -0.34
TSPAN1-201ENST00000372003 KRI1Q8N9T8 703 aaKnown RBP12.9□□□□□ -0.34
TSPAN1-201ENST00000372003 ESR2Q92731 530 aa12.9□□□□□ -0.34
TSPAN1-201ENST00000372003 SMARCE1Q969G3 411 aa12.9□□□□□ -0.34
TSPAN1-201ENST00000372003 CCDC51Q96ER9 411 aa12.9□□□□□ -0.34
TSPAN1-201ENST00000372003 ZKSCAN3Q9BRR0 538 aa12.9□□□□□ -0.34
TSPAN1-201ENST00000372003 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.9□□□□□ -0.34
TSPAN1-201ENST00000372003 KRT23Q9C075 422 aa12.9□□□□□ -0.34
TSPAN1-201ENST00000372003 FEZ2Q9UHY8 353 aaPredicted RBP12.9□□□□□ -0.34
TSPAN1-201ENST00000372003 SIPA1L1O43166 1804 aa12.9□□□□□ -0.34
TSPAN1-201ENST00000372003 TMEM232C9JQI7 657 aa12.89□□□□□ -0.35
TSPAN1-201ENST00000372003 NMT2O60551 498 aa12.89□□□□□ -0.35
TSPAN1-201ENST00000372003 SEC31AO94979 1220 aaKnown RBP12.89□□□□□ -0.35
TSPAN1-201ENST00000372003 PCP11498 1178 aaKnown RBP12.89□□□□□ -0.35
TSPAN1-201ENST00000372003 MARCKSP29966 332 aaPredicted RBP12.89□□□□□ -0.35
TSPAN1-201ENST00000372003 ECE1P42892 770 aa12.89□□□□□ -0.35
TSPAN1-201ENST00000372003 METAP2P50579 478 aaKnown RBP eCLIP12.89□□□□□ -0.35
TSPAN1-201ENST00000372003 NR1I3Q14994 352 aa12.89□□□□□ -0.35
TSPAN1-201ENST00000372003 LONRF2Q1L5Z9 754 aa12.89□□□□□ -0.35
TSPAN1-201ENST00000372003 HDXQ7Z353 690 aa12.89□□□□□ -0.35
TSPAN1-201ENST00000372003 NEDD1Q8NHV4 660 aa12.89□□□□□ -0.35
TSPAN1-201ENST00000372003 WDR24Q96S15 920 aa12.89□□□□□ -0.35
TSPAN1-201ENST00000372003 ZIC5Q96T25 663 aa12.89□□□□□ -0.35
TSPAN1-201ENST00000372003 CNNM2Q9H8M5 875 aa12.89□□□□□ -0.35
TSPAN1-201ENST00000372003 EFCC1Q9HA90 598 aa12.89□□□□□ -0.35
TSPAN1-201ENST00000372003 AS3MTQ9HBK9 375 aa12.89□□□□□ -0.35
TSPAN1-201ENST00000372003 GINM1Q9NU53 330 aa12.89□□□□□ -0.35
TSPAN1-201ENST00000372003 ZSWIM5Q9P217 1185 aa12.89□□□□□ -0.35
TSPAN1-201ENST00000372003 CDC23Q9UJX2 597 aa12.89□□□□□ -0.35
TSPAN1-201ENST00000372003 AFG3L2Q9Y4W6 797 aa12.89□□□□□ -0.35
TSPAN1-201ENST00000372003 TRPM7Q96QT4 1865 aa12.89□□□□□ -0.35
TSPAN1-201ENST00000372003 A0A1B0GTH6 734 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 AKR1B15C9JRZ8 316 aaPredicted RBP12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 SH2B2O14492 632 aaPredicted RBP12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 FECHP22830 423 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 ICA1Q05084 483 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 PPIL2Q13356 520 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 GNL2Q13823 731 aaKnown RBP12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 MORC3Q14149 939 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 ZYXQ15942 572 aaKnown RBP12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 LONRF3Q496Y0 759 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 SGMS1Q86VZ5 419 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 ZNF280CQ8ND82 737 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 ACER1Q8TDN7 264 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 CEP95Q96GE4 821 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 KANSL2Q9H9L4 492 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 MYO1AQ9UBC5 1043 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 MAN1B1Q9UKM7 699 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 RAD21O60216 631 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 ZBTB48P10074 688 aaPredicted RBP12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 EEF2P13639 858 aaKnown RBP12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 PTPREP23469 700 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 ACTN2P35609 894 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 CHMP4BP1P59074 171 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 DGKZQ13574 1117 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 POSTNQ15063 836 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 SPATA20Q8TB22 786 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 CTAGE1Q96RT6 745 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 MTA3Q9BTC8 594 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 RASSF4Q9H2L5 321 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 ACBD3Q9H3P7 528 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 GPHNQ9NQX3 736 aaPredicted RBP12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 IL17RBQ9NRM6 502 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 ADAM21Q9UKJ8 722 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 STX8Q9UNK0 236 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 CEP131Q9UPN4 1083 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 NFE2L3Q9Y4A8 694 aa12.88□□□□□ -0.35
TSPAN1-201ENST00000372003 ITIH6Q6UXX5 1313 aa12.87□□□□□ -0.35
TSPAN1-201ENST00000372003 A0A1W2PRG0 241 aa12.87□□□□□ -0.35
TSPAN1-201ENST00000372003 USP17L10C9JJH3 530 aa12.87□□□□□ -0.35
TSPAN1-201ENST00000372003 KIF5CO60282 957 aa12.87□□□□□ -0.35
TSPAN1-201ENST00000372003 LIFRP42702 1097 aa12.87□□□□□ -0.35
TSPAN1-201ENST00000372003 NOGQ13253 232 aa12.87□□□□□ -0.35
TSPAN1-201ENST00000372003 SNAPC2Q13487 334 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms