RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 ZNF70Q9UC06 446 aaPredicted RBP22.33■■□□□ 1.17
LHX3-202ENST00000371748 COL2A1P02458 1487 aaPredicted RBP22.33■■□□□ 1.17
LHX3-202ENST00000371748 NDUFB10O96000 172 aa22.33■■□□□ 1.16
LHX3-202ENST00000371748 NYAP1Q6ZVC0 841 aa22.33■■□□□ 1.16
LHX3-202ENST00000371748 OGFOD1Q8N543 542 aa22.33■■□□□ 1.16
LHX3-202ENST00000371748 HDAC9Q9UKV0 1011 aa22.33■■□□□ 1.16
LHX3-202ENST00000371748 PCDHA1Q9Y5I3 950 aa22.33■■□□□ 1.16
LHX3-202ENST00000371748 USP17L15C9J2P7 530 aa22.32■■□□□ 1.16
LHX3-202ENST00000371748 USP17L13C9JLJ4 530 aa22.32■■□□□ 1.16
LHX3-202ENST00000371748 USP17L11C9JVI0 530 aa22.32■■□□□ 1.16
LHX3-202ENST00000371748 USP17L18D6R9N7 530 aa22.32■■□□□ 1.16
LHX3-202ENST00000371748 USP17L22D6RA61 530 aa22.32■■□□□ 1.16
LHX3-202ENST00000371748 USP17L17D6RBQ6 530 aa22.32■■□□□ 1.16
LHX3-202ENST00000371748 USP17L19D6RCP7 530 aa22.32■■□□□ 1.16
LHX3-202ENST00000371748 USP17L20D6RJB6 530 aa22.32■■□□□ 1.16
LHX3-202ENST00000371748 USP17L24Q0WX57 530 aa22.32■■□□□ 1.16
LHX3-202ENST00000371748 CDKAL1Q5VV42 579 aa22.32■■□□□ 1.16
LHX3-202ENST00000371748 USP17L6PQ6QN14 398 aa22.32■■□□□ 1.16
LHX3-202ENST00000371748 KLRC4O43908 158 aa22.32■■□□□ 1.16
LHX3-202ENST00000371748 KMT5BQ4FZB7 885 aa22.32■■□□□ 1.16
LHX3-202ENST00000371748 APTXQ7Z2E3 356 aaKnown RBP22.32■■□□□ 1.16
LHX3-202ENST00000371748 GMCL1P1Q8NEA9 526 aa22.32■■□□□ 1.16
LHX3-202ENST00000371748 A0A1W2PRG0 241 aa22.31■■□□□ 1.16
LHX3-202ENST00000371748 PRCPP42785 496 aa22.31■■□□□ 1.16
LHX3-202ENST00000371748 PAK1Q13153 545 aa22.31■■□□□ 1.16
LHX3-202ENST00000371748 DHX8Q14562 1220 aaKnown RBP22.31■■□□□ 1.16
LHX3-202ENST00000371748 NR1I3Q14994 352 aa22.31■■□□□ 1.16
LHX3-202ENST00000371748 SLC16A10Q8TF71 515 aa22.31■■□□□ 1.16
LHX3-202ENST00000371748 NELFBQ8WX92 580 aa22.31■■□□□ 1.16
LHX3-202ENST00000371748 ZNF592Q92610 1267 aa22.31■■□□□ 1.16
LHX3-202ENST00000371748 CGNQ9P2M7 1197 aaKnown RBP22.31■■□□□ 1.16
LHX3-202ENST00000371748 LRWD1Q9UFC0 647 aa22.31■■□□□ 1.16
LHX3-202ENST00000371748 KIF13BQ9NQT8 1826 aa22.31■■□□□ 1.16
LHX3-202ENST00000371748 A0A1B0GTH6 734 aa22.31■■□□□ 1.16
LHX3-202ENST00000371748 KIF20AO95235 890 aa22.31■■□□□ 1.16
LHX3-202ENST00000371748 IKQ13123 557 aaPredicted RBP22.31■■□□□ 1.16
LHX3-202ENST00000371748 CCAR2Q8N163 923 aaKnown RBP22.31■■□□□ 1.16
LHX3-202ENST00000371748 VEZTQ9HBM0 779 aa22.31■■□□□ 1.16
LHX3-202ENST00000371748 RWDD2AQ9UIY3 292 aa22.31■■□□□ 1.16
LHX3-202ENST00000371748 GMCL1Q96IK5 515 aa22.3■■□□□ 1.16
LHX3-202ENST00000371748 CUEDC2Q9H467 287 aa22.3■■□□□ 1.16
LHX3-202ENST00000371748 HERC5Q9UII4 1024 aaKnown RBP22.3■■□□□ 1.16
LHX3-202ENST00000371748 CNTNAP1P78357 1384 aa22.3■■□□□ 1.16
LHX3-202ENST00000371748 POTEMA6NI47 508 aa22.3■■□□□ 1.16
LHX3-202ENST00000371748 TEX33O43247 280 aa22.3■■□□□ 1.16
LHX3-202ENST00000371748 FXR2P51116 673 aaKnown RBP eCLIP22.3■■□□□ 1.16
LHX3-202ENST00000371748 SPECC1LQ69YQ0 1117 aa22.3■■□□□ 1.16
LHX3-202ENST00000371748 PPP4R3AQ6IN85 833 aa22.3■■□□□ 1.16
LHX3-202ENST00000371748 NIM1KQ8IY84 436 aa22.3■■□□□ 1.16
LHX3-202ENST00000371748 SPICE1Q8N0Z3 855 aa22.3■■□□□ 1.16
LHX3-202ENST00000371748 FAM151AQ8WW52 585 aa22.3■■□□□ 1.16
LHX3-202ENST00000371748 CALML4Q96GE6 196 aa22.3■■□□□ 1.16
LHX3-202ENST00000371748 DDX25Q9UHL0 483 aaKnown RBP22.3■■□□□ 1.16
LHX3-202ENST00000371748 ATF5Q9Y2D1 282 aaPredicted RBP22.3■■□□□ 1.16
LHX3-202ENST00000371748 ZBTB7AO95365 584 aa22.29■■□□□ 1.16
LHX3-202ENST00000371748 MYL1P05976 194 aa22.29■■□□□ 1.16
LHX3-202ENST00000371748 TBX2Q13207 712 aaPredicted RBP22.29■■□□□ 1.16
LHX3-202ENST00000371748 TMEM266Q2M3C6 531 aa22.29■■□□□ 1.16
LHX3-202ENST00000371748 SPDYE2Q495Y8 402 aa22.29■■□□□ 1.16
LHX3-202ENST00000371748 E4F1Q66K89 784 aaPredicted RBP22.29■■□□□ 1.16
LHX3-202ENST00000371748 CDAN1Q8IWY9 1227 aa22.29■■□□□ 1.16
LHX3-202ENST00000371748 GJA10Q969M2 543 aa22.29■■□□□ 1.16
LHX3-202ENST00000371748 DDX41Q9UJV9 622 aaKnown RBP22.29■■□□□ 1.16
LHX3-202ENST00000371748 ZNRF3Q9ULT6 936 aa22.29■■□□□ 1.16
LHX3-202ENST00000371748 NRDCO43847 1150 aa22.28■■□□□ 1.16
LHX3-202ENST00000371748 BMP3P12645 472 aa22.28■■□□□ 1.16
LHX3-202ENST00000371748 ECE1P42892 770 aa22.28■■□□□ 1.16
LHX3-202ENST00000371748 KCNB1Q14721 858 aa22.28■■□□□ 1.16
LHX3-202ENST00000371748 PTPN14Q15678 1187 aa22.28■■□□□ 1.16
LHX3-202ENST00000371748 MAGEF1Q9HAY2 307 aa22.28■■□□□ 1.16
LHX3-202ENST00000371748 TAL1P17542 331 aaPredicted RBP22.28■■□□□ 1.16
LHX3-202ENST00000371748 GRB10Q13322 594 aa22.28■■□□□ 1.16
LHX3-202ENST00000371748 USH1GQ495M9 461 aa22.28■■□□□ 1.16
LHX3-202ENST00000371748 TRIM9Q9C026 710 aa22.28■■□□□ 1.16
LHX3-202ENST00000371748 RHOBTB3O94955 611 aa22.27■■□□□ 1.16
LHX3-202ENST00000371748 SYDE2Q5VT97 1194 aa22.27■■□□□ 1.16
LHX3-202ENST00000371748 ADSSL1Q8N142 457 aa22.27■■□□□ 1.16
LHX3-202ENST00000371748 UIMC1Q96RL1 719 aa22.27■■□□□ 1.16
LHX3-202ENST00000371748 ADD3Q9UEY8 706 aaKnown RBP22.27■■□□□ 1.16
LHX3-202ENST00000371748 TRIM49BA6NDI0 452 aa22.27■■□□□ 1.16
LHX3-202ENST00000371748 HAS1Q92839 578 aa22.27■■□□□ 1.16
LHX3-202ENST00000371748 PNMA5Q96PV4 448 aa22.27■■□□□ 1.16
LHX3-202ENST00000371748 AMNQ9BXJ7 453 aa22.27■■□□□ 1.16
LHX3-202ENST00000371748 TMEM39BQ9GZU3 492 aa22.27■■□□□ 1.16
LHX3-202ENST00000371748 ZNF215Q9UL58 517 aaPredicted RBP22.27■■□□□ 1.16
LHX3-202ENST00000371748 ACER1Q8TDN7 264 aa22.26■■□□□ 1.15
LHX3-202ENST00000371748 NUDT12Q9BQG2 462 aa22.26■■□□□ 1.15
LHX3-202ENST00000371748 TMX1Q9H3N1 280 aa22.26■■□□□ 1.15
LHX3-202ENST00000371748 KCND1Q9NSA2 647 aa22.26■■□□□ 1.15
LHX3-202ENST00000371748 PIM2Q9P1W9 311 aa22.26■■□□□ 1.15
LHX3-202ENST00000371748 ADKP55263 362 aaKnown RBP22.26■■□□□ 1.15
LHX3-202ENST00000371748 ASIC1P78348 528 aa22.26■■□□□ 1.15
LHX3-202ENST00000371748 CXCL9Q07325 125 aa22.26■■□□□ 1.15
LHX3-202ENST00000371748 GIMAP8Q8ND71 665 aaPredicted RBP22.26■■□□□ 1.15
LHX3-202ENST00000371748 ANO3Q9BYT9 981 aa22.26■■□□□ 1.15
LHX3-202ENST00000371748 RAB34Q9BZG1 259 aa22.26■■□□□ 1.15
LHX3-202ENST00000371748 GLT8D2Q9H1C3 349 aa22.26■■□□□ 1.15
LHX3-202ENST00000371748 BLOC1S4Q9NUP1 217 aa22.26■■□□□ 1.15
LHX3-202ENST00000371748 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.26■■□□□ 1.15
LHX3-202ENST00000371748 MEIS2O14770 477 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms