RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 A6NHS1 94 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 ZBTB43O43298 467 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 RAD51CO43502 376 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 EVI5O60447 810 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 FTCDO95954 541 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 SHBGP04278 402 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 FAM163BP0C2L3 166 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 RANBP1P43487 201 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 NLRP6P59044 892 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 SAFBQ15424 915 aaKnown RBP eCLIP10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 ZNF174Q15697 407 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 PPP1R15BQ5SWA1 713 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 CWF19L1Q69YN2 538 aaKnown RBP10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 COPS6Q7L5N1 327 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 IFT20Q8IY31 132 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 FNBP4Q8N3X1 1017 aaPredicted RBP10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 ZNF513Q8N8E2 541 aaPredicted RBP10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 SLC17A8Q8NDX2 589 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 LRRC59Q96AG4 307 aaKnown RBP10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 PLCD4Q9BRC7 762 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 TTYH3Q9C0H2 523 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 NUCKS1Q9H1E3 243 aaKnown RBP10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 KCNMB3Q9NPA1 279 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 RWDD2AQ9UIY3 292 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 PCDHA13Q9Y5I0 950 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 ROBO2Q9HCK4 1378 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 STK36Q9NRP7 1315 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 BCL9LQ86UU0 1499 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 ERICH2A1L162 156 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 PRDM1O75626 825 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 IPO7O95373 1038 aaKnown RBP10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 TRIM21P19474 475 aaKnown RBP10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 ECHS1P30084 290 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 ERVK-9P63128 1117 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 SSRP1Q08945 709 aaKnown RBP10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 BLMHQ13867 455 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 TSR1Q2NL82 804 aaKnown RBP10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 GKAP1Q5VSY0 366 aaPredicted RBP10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 KLHDC7AQ5VTJ3 777 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 KANK3Q6NY19 840 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 SLC30A9Q6PML9 568 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 TRIM74Q86UV6 250 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 TRIM73Q86UV7 250 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 RBM33Q96EV2 1170 aaKnown RBP10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 PCMTD1Q96MG8 357 aaPredicted RBP10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 EPAS1Q99814 870 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 OSBPL1AQ9BXW6 950 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 KDM4CQ9H3R0 1056 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 TAF1DQ9H5J8 278 aaPredicted RBP10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 ARHGAP20Q9P2F6 1191 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 STK38LQ9Y2H1 464 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 HYOU1Q9Y4L1 999 aa10.42□□□□□ -0.74
HMGCLL1-204ENST00000370852 LGALS16A8MUM7 142 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 GCOM1H8Y6P7 765 aaPredicted RBP10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 ADAMTS3O15072 1205 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 RTN3O95197 1032 aaPredicted RBP10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 MYZAPP0CAP1 466 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 TNFRSF8P28908 595 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 CYLC1P35663 651 aaPredicted RBP10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 PAPOLAP51003 745 aaKnown RBP10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 PPP2R2AP63151 447 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 TRIM14Q14142 442 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 HLTFQ14527 1009 aaKnown RBP eCLIP10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 IGDCC4Q8TDY8 1250 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 LPIN2Q92539 896 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 EZH1Q92800 747 aaPredicted RBP10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 GSDMAQ96QA5 445 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 UBAC1Q9BSL1 405 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 IFIH1Q9BYX4 1025 aaKnown RBP10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 LY9Q9HBG7 655 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 PAPOLBQ9NRJ5 636 aaKnown RBP10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 BSDC1Q9NW68 430 aaPredicted RBP10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 ZMYND8Q9ULU4 1186 aaPredicted RBP10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 EID1Q9Y6B2 187 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 PXDNQ92626 1479 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 GPAA1O43292 621 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 TACC1O75410 805 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 PDHA1P08559 390 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 KRT16P08779 473 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 HOXB7P09629 217 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 RASSF7Q02833 373 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 RNASELQ05823 741 aaKnown RBP10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 TCIRG1Q13488 830 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 LAMB3Q13751 1172 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 UBAP2Q5T6F2 1119 aaKnown RBP10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 DNAAF5Q86Y56 855 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 DRAXINQ8NBI3 349 aaPredicted RBP10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 PLIN2Q99541 437 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 ELAC2Q9BQ52 826 aaKnown RBP10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 NOP53Q9NZM5 478 aaKnown RBP10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 NKX1-2Q9UD57 310 aaPredicted RBP10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 SLC12A4Q9UP95 1085 aa10.41□□□□□ -0.74
HMGCLL1-204ENST00000370852 DDX60Q8IY21 1712 aaKnown RBP10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 WDR17Q8IZU2 1322 aa10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 MYH1P12882 1939 aa10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 KDM3BQ7LBC6 1761 aa10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 ORC4O43929 436 aa10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 SMIM24O75264 130 aa10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 FESP07332 822 aa10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 CTNNA1P35221 906 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms