RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 C1QTNF1Q9BXJ1 281 aa18.31■□□□□ 0.52
SSR4-204ENST00000370087 ECHDC1Q9NTX5 307 aa18.31■□□□□ 0.52
SSR4-204ENST00000370087 PRR12Q9ULL5 1215 aa18.31■□□□□ 0.52
SSR4-204ENST00000370087 Q9Y3F1 56 aa18.31■□□□□ 0.52
SSR4-204ENST00000370087 APPP05067 770 aa18.3■□□□□ 0.52
SSR4-204ENST00000370087 FDX1P10109 184 aa18.3■□□□□ 0.52
SSR4-204ENST00000370087 SLC1A4P43007 532 aa18.3■□□□□ 0.52
SSR4-204ENST00000370087 PURAQ00577 322 aaKnown RBP18.3■□□□□ 0.52
SSR4-204ENST00000370087 TAP1Q03518 808 aa18.3■□□□□ 0.52
SSR4-204ENST00000370087 KIAA1211Q6ZU35 1233 aa18.3■□□□□ 0.52
SSR4-204ENST00000370087 LRFN3Q9BTN0 628 aa18.3■□□□□ 0.52
SSR4-204ENST00000370087 SEZ6LQ9BYH1 1024 aa18.3■□□□□ 0.52
SSR4-204ENST00000370087 VTA1Q9NP79 307 aa18.3■□□□□ 0.52
SSR4-204ENST00000370087 TLL1O43897 1013 aa18.29■□□□□ 0.52
SSR4-204ENST00000370087 NMT2O60551 498 aa18.29■□□□□ 0.52
SSR4-204ENST00000370087 DUSP28Q4G0W2 176 aa18.29■□□□□ 0.52
SSR4-204ENST00000370087 NSMFQ6X4W1 530 aa18.29■□□□□ 0.52
SSR4-204ENST00000370087 CHURC1Q8WUH1 139 aa18.29■□□□□ 0.52
SSR4-204ENST00000370087 ARNTL2Q8WYA1 636 aa18.29■□□□□ 0.52
SSR4-204ENST00000370087 INCENPQ9NQS7 918 aa18.29■□□□□ 0.52
SSR4-204ENST00000370087 TRIP12Q14669 1992 aaPredicted RBP18.28■□□□□ 0.52
SSR4-204ENST00000370087 PATL2C9JE40 543 aaKnown RBP18.28■□□□□ 0.52
SSR4-204ENST00000370087 PFKMP08237 780 aa18.28■□□□□ 0.52
SSR4-204ENST00000370087 MYL3P08590 195 aa18.28■□□□□ 0.52
SSR4-204ENST00000370087 AAK1Q2M2I8 961 aa18.28■□□□□ 0.52
SSR4-204ENST00000370087 ZNF287Q9HBT7 754 aa18.28■□□□□ 0.52
SSR4-204ENST00000370087 C11orf16Q9NQ32 467 aa18.28■□□□□ 0.52
SSR4-204ENST00000370087 IL17RBQ9NRM6 502 aa18.28■□□□□ 0.52
SSR4-204ENST00000370087 CCPG1Q9ULG6 757 aa18.28■□□□□ 0.52
SSR4-204ENST00000370087 NFIBO00712 420 aa18.27■□□□□ 0.52
SSR4-204ENST00000370087 FOXP2O15409 715 aa18.27■□□□□ 0.52
SSR4-204ENST00000370087 GTPBP6O43824 516 aaPredicted RBP18.27■□□□□ 0.52
SSR4-204ENST00000370087 LPXNO60711 386 aa18.27■□□□□ 0.52
SSR4-204ENST00000370087 PLA2G6O60733 806 aa18.27■□□□□ 0.52
SSR4-204ENST00000370087 GNAT2P19087 354 aa18.27■□□□□ 0.52
SSR4-204ENST00000370087 ALDH5A1P51649 535 aaPredicted RBP18.27■□□□□ 0.52
SSR4-204ENST00000370087 PPARAQ07869 468 aa18.27■□□□□ 0.52
SSR4-204ENST00000370087 SLC9A7Q96T83 725 aa18.27■□□□□ 0.52
SSR4-204ENST00000370087 WDR11Q9BZH6 1224 aa18.27■□□□□ 0.52
SSR4-204ENST00000370087 MTMR7Q9Y216 660 aa18.27■□□□□ 0.52
SSR4-204ENST00000370087 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.27■□□□□ 0.52
SSR4-204ENST00000370087 MS4A1P11836 297 aa18.26■□□□□ 0.51
SSR4-204ENST00000370087 PDE4BQ07343 736 aa18.26■□□□□ 0.51
SSR4-204ENST00000370087 GRB10Q13322 594 aa18.26■□□□□ 0.51
SSR4-204ENST00000370087 BAATQ14032 418 aaPredicted RBP18.26■□□□□ 0.51
SSR4-204ENST00000370087 NBPF20Q3BBV1 942 aa18.26■□□□□ 0.51
SSR4-204ENST00000370087 FAM47CQ5HY64 1035 aa18.26■□□□□ 0.51
SSR4-204ENST00000370087 TTBK2Q6IQ55 1244 aa18.26■□□□□ 0.51
SSR4-204ENST00000370087 RCSD1Q6JBY9 416 aa18.26■□□□□ 0.51
SSR4-204ENST00000370087 SLC30A10Q6XR72 485 aa18.26■□□□□ 0.51
SSR4-204ENST00000370087 TMCO2Q7Z6W1 182 aaPredicted RBP18.26■□□□□ 0.51
SSR4-204ENST00000370087 HERC6Q8IVU3 1022 aa18.26■□□□□ 0.51
SSR4-204ENST00000370087 OR6J1Q8NGC5 347 aa18.26■□□□□ 0.51
SSR4-204ENST00000370087 MTG1Q9BT17 334 aaPredicted RBP18.26■□□□□ 0.51
SSR4-204ENST00000370087 POLR3EQ9NVU0 708 aa18.26■□□□□ 0.51
SSR4-204ENST00000370087 STX8Q9UNK0 236 aa18.26■□□□□ 0.51
SSR4-204ENST00000370087 RBM47A0AV96 593 aaKnown RBP18.25■□□□□ 0.51
SSR4-204ENST00000370087 LCHNA4D1U4 455 aa18.25■□□□□ 0.51
SSR4-204ENST00000370087 FAM86C2PA6NEL3 165 aa18.25■□□□□ 0.51
SSR4-204ENST00000370087 ICAM1P05362 532 aa18.25■□□□□ 0.51
SSR4-204ENST00000370087 IQCF3P0C7M6 154 aa18.25■□□□□ 0.51
SSR4-204ENST00000370087 SUPT20HL2P0C7V6 817 aa18.25■□□□□ 0.51
SSR4-204ENST00000370087 SLC16A2P36021 539 aa18.25■□□□□ 0.51
SSR4-204ENST00000370087 C20orf194Q5TEA3 1177 aa18.25■□□□□ 0.51
SSR4-204ENST00000370087 DIEXFQ68CQ4 756 aaKnown RBP18.25■□□□□ 0.51
SSR4-204ENST00000370087 COPS5Q92905 334 aa18.25■□□□□ 0.51
SSR4-204ENST00000370087 RANBP17Q9H2T7 1088 aaKnown RBP18.25■□□□□ 0.51
SSR4-204ENST00000370087 CD320Q9NPF0 282 aa18.25■□□□□ 0.51
SSR4-204ENST00000370087 SIP14410 1827 aa18.25■□□□□ 0.51
SSR4-204ENST00000370087 ZFYP08048 801 aaPredicted RBP18.24■□□□□ 0.51
SSR4-204ENST00000370087 ACTN1P12814 892 aa18.24■□□□□ 0.51
SSR4-204ENST00000370087 CPT1AP50416 773 aa18.24■□□□□ 0.51
SSR4-204ENST00000370087 CTDSPL2Q05D32 466 aa18.24■□□□□ 0.51
SSR4-204ENST00000370087 NAPBQ9H115 298 aa18.24■□□□□ 0.51
SSR4-204ENST00000370087 COG5Q9UP83 839 aa18.24■□□□□ 0.51
SSR4-204ENST00000370087 RFC2P35250 354 aa18.23■□□□□ 0.51
SSR4-204ENST00000370087 GPNMBQ14956 572 aa18.23■□□□□ 0.51
SSR4-204ENST00000370087 CCDC96Q2M329 555 aa18.23■□□□□ 0.51
SSR4-204ENST00000370087 TCTN1Q2MV58 587 aa18.23■□□□□ 0.51
SSR4-204ENST00000370087 TMEM31Q5JXX7 168 aa18.23■□□□□ 0.51
SSR4-204ENST00000370087 PHOSPHO2Q8TCD6 241 aa18.23■□□□□ 0.51
SSR4-204ENST00000370087 GDPD5Q8WTR4 605 aa18.23■□□□□ 0.51
SSR4-204ENST00000370087 CLEC4DQ8WXI8 215 aa18.23■□□□□ 0.51
SSR4-204ENST00000370087 HLA-CQ95604 372 aa18.23■□□□□ 0.51
SSR4-204ENST00000370087 CTAGE1Q96RT6 745 aa18.23■□□□□ 0.51
SSR4-204ENST00000370087 BRWD1Q9NSI6 2320 aa18.23■□□□□ 0.51
SSR4-204ENST00000370087 PITPNM1O00562 1244 aa18.22■□□□□ 0.51
SSR4-204ENST00000370087 NOVP48745 357 aa18.22■□□□□ 0.51
SSR4-204ENST00000370087 NACAP1Q9BZK3 213 aa18.22■□□□□ 0.51
SSR4-204ENST00000370087 FTOQ9C0B1 505 aaKnown RBP eCLIP18.22■□□□□ 0.51
SSR4-204ENST00000370087 HCN4Q9Y3Q4 1203 aa18.22■□□□□ 0.51
SSR4-204ENST00000370087 FRMPD2Q68DX3 1309 aaPredicted RBP18.22■□□□□ 0.51
SSR4-204ENST00000370087 PTPDC1A2A3K4 754 aa18.21■□□□□ 0.51
SSR4-204ENST00000370087 TSPY2A6NKD2 308 aa18.21■□□□□ 0.51
SSR4-204ENST00000370087 ARIH2O95376 493 aa18.21■□□□□ 0.51
SSR4-204ENST00000370087 CALML3P27482 149 aa18.21■□□□□ 0.51
SSR4-204ENST00000370087 DEFB103AP81534 67 aa18.21■□□□□ 0.51
SSR4-204ENST00000370087 ZMYM1Q5SVZ6 1142 aa18.21■□□□□ 0.51
SSR4-204ENST00000370087 NFRKBQ6P4R8 1299 aa18.21■□□□□ 0.51
SSR4-204ENST00000370087 OTUD7AQ8TE49 926 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms