RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 PPM1EQ8WY54 764 aa14.37□□□□□ -0.11
CHD1L-202ENST00000369258 ARL8AQ96BM9 186 aa14.37□□□□□ -0.11
CHD1L-202ENST00000369258 NUDT12Q9BQG2 462 aa14.37□□□□□ -0.11
CHD1L-202ENST00000369258 SRP68Q9UHB9 627 aaKnown RBP14.37□□□□□ -0.11
CHD1L-202ENST00000369258 CAPN11Q9UMQ6 739 aa14.37□□□□□ -0.11
CHD1L-202ENST00000369258 CALM1P0DP23 149 aa14.37□□□□□ -0.11
CHD1L-202ENST00000369258 CALM2P0DP24 149 aa14.37□□□□□ -0.11
CHD1L-202ENST00000369258 CALM3P0DP25 149 aa14.37□□□□□ -0.11
CHD1L-202ENST00000369258 DHX37Q8IY37 1157 aaKnown RBP14.37□□□□□ -0.11
CHD1L-202ENST00000369258 CCDC87Q9NVE4 849 aa14.37□□□□□ -0.11
CHD1L-202ENST00000369258 A0A1W2PQC6 194 aa14.37□□□□□ -0.11
CHD1L-202ENST00000369258 POTEMA6NI47 508 aa14.37□□□□□ -0.11
CHD1L-202ENST00000369258 TULP1O00294 542 aaPredicted RBP14.37□□□□□ -0.11
CHD1L-202ENST00000369258 PDE4CQ08493 712 aa14.37□□□□□ -0.11
CHD1L-202ENST00000369258 CAVIN4Q5BKX8 364 aa14.37□□□□□ -0.11
CHD1L-202ENST00000369258 CCDC70Q6NSX1 233 aa14.37□□□□□ -0.11
CHD1L-202ENST00000369258 FAM76AQ8TAV0 307 aa14.37□□□□□ -0.11
CHD1L-202ENST00000369258 TGFBRAP1Q8WUH2 860 aa14.37□□□□□ -0.11
CHD1L-202ENST00000369258 ARHGAP20Q9P2F6 1191 aa14.37□□□□□ -0.11
CHD1L-202ENST00000369258 BCL9LQ86UU0 1499 aa14.36□□□□□ -0.11
CHD1L-202ENST00000369258 BACH1O14867 736 aa14.36□□□□□ -0.11
CHD1L-202ENST00000369258 TRAPPC10P48553 1259 aa14.36□□□□□ -0.11
CHD1L-202ENST00000369258 RASSF7Q02833 373 aa14.36□□□□□ -0.11
CHD1L-202ENST00000369258 RRAGAQ7L523 313 aa14.36□□□□□ -0.11
CHD1L-202ENST00000369258 POTEDQ86YR6 584 aa14.36□□□□□ -0.11
CHD1L-202ENST00000369258 KIAA0895Q8NCT3 520 aa14.36□□□□□ -0.11
CHD1L-202ENST00000369258 SH3RF3Q8TEJ3 882 aaPredicted RBP14.36□□□□□ -0.11
CHD1L-202ENST00000369258 FAM107BQ9H098 131 aa14.36□□□□□ -0.11
CHD1L-202ENST00000369258 MKNK2Q9HBH9 465 aa14.36□□□□□ -0.11
CHD1L-202ENST00000369258 EXOC1Q9NV70 894 aa14.36□□□□□ -0.11
CHD1L-202ENST00000369258 LOC102724428A0A0B4J2F2 783 aa14.36□□□□□ -0.11
CHD1L-202ENST00000369258 EEF1GP26641 437 aaKnown RBP14.36□□□□□ -0.11
CHD1L-202ENST00000369258 GUCY2FP51841 1108 aa14.36□□□□□ -0.11
CHD1L-202ENST00000369258 SIK1P57059 783 aa14.36□□□□□ -0.11
CHD1L-202ENST00000369258 MIIPQ5JXC2 388 aa14.36□□□□□ -0.11
CHD1L-202ENST00000369258 CCNI2Q6ZMN8 369 aaPredicted RBP14.36□□□□□ -0.11
CHD1L-202ENST00000369258 IFT81Q8WYA0 676 aa14.36□□□□□ -0.11
CHD1L-202ENST00000369258 CCDC42Q96M95 316 aa14.36□□□□□ -0.11
CHD1L-202ENST00000369258 TANGO6Q9C0B7 1094 aa14.36□□□□□ -0.11
CHD1L-202ENST00000369258 SEMA6BQ9H3T3 888 aa14.36□□□□□ -0.11
CHD1L-202ENST00000369258 BCL9O00512 1426 aa14.36□□□□□ -0.11
CHD1L-202ENST00000369258 PSMA7O14818 248 aa14.35□□□□□ -0.11
CHD1L-202ENST00000369258 EIF4A3P38919 411 aaKnown RBP14.35□□□□□ -0.11
CHD1L-202ENST00000369258 DNM2P50570 870 aa14.35□□□□□ -0.11
CHD1L-202ENST00000369258 FGFBP2Q9BYJ0 223 aa14.35□□□□□ -0.11
CHD1L-202ENST00000369258 DEF6Q9H4E7 631 aa14.35□□□□□ -0.11
CHD1L-202ENST00000369258 ANAPC4Q9UJX5 808 aa14.35□□□□□ -0.11
CHD1L-202ENST00000369258 FRMPD2Q68DX3 1309 aaPredicted RBP14.35□□□□□ -0.11
CHD1L-202ENST00000369258 TIAM2Q8IVF5 1701 aa14.35□□□□□ -0.11
CHD1L-202ENST00000369258 SHANK3Q9BYB0 1731 aa14.35□□□□□ -0.11
CHD1L-202ENST00000369258 GOLGA6CA6NDK9 693 aa14.35□□□□□ -0.11
CHD1L-202ENST00000369258 GOLGA6BA6NDN3 693 aa14.35□□□□□ -0.11
CHD1L-202ENST00000369258 RAD21O60216 631 aa14.35□□□□□ -0.11
CHD1L-202ENST00000369258 ZEB2O60315 1214 aa14.35□□□□□ -0.11
CHD1L-202ENST00000369258 FTCDO95954 541 aa14.35□□□□□ -0.11
CHD1L-202ENST00000369258 SSBP05455 408 aaKnown RBP eCLIP14.35□□□□□ -0.11
CHD1L-202ENST00000369258 FAM153BP0C7A2 387 aa14.35□□□□□ -0.11
CHD1L-202ENST00000369258 GOLGA6DP0CG33 693 aa14.35□□□□□ -0.11
CHD1L-202ENST00000369258 FAM153CQ494X1 144 aa14.35□□□□□ -0.11
CHD1L-202ENST00000369258 IQCEQ6IPM2 695 aa14.35□□□□□ -0.11
CHD1L-202ENST00000369258 CABP7Q86V35 215 aa14.35□□□□□ -0.11
CHD1L-202ENST00000369258 GOLGA6AQ9NYA3 693 aa14.35□□□□□ -0.11
CHD1L-202ENST00000369258 FAM153AQ9UHL3 310 aa14.35□□□□□ -0.11
CHD1L-202ENST00000369258 LONP1P36776 959 aaKnown RBP14.34□□□□□ -0.11
CHD1L-202ENST00000369258 GTF2A1P52655 376 aaPredicted RBP14.34□□□□□ -0.11
CHD1L-202ENST00000369258 ICE2Q659A1 982 aa14.34□□□□□ -0.11
CHD1L-202ENST00000369258 AMIGO3Q86WK7 504 aa14.34□□□□□ -0.11
CHD1L-202ENST00000369258 CREG2Q8IUH2 290 aa14.34□□□□□ -0.11
CHD1L-202ENST00000369258 IFIH1Q9BYX4 1025 aaKnown RBP14.34□□□□□ -0.11
CHD1L-202ENST00000369258 THAP9Q9H5L6 903 aa14.34□□□□□ -0.11
CHD1L-202ENST00000369258 PCDHA4Q9UN74 947 aa14.34□□□□□ -0.11
CHD1L-202ENST00000369258 LRRC53A6NM62 1247 aa14.34□□□□□ -0.11
CHD1L-202ENST00000369258 DDAH1O94760 285 aa14.34□□□□□ -0.11
CHD1L-202ENST00000369258 KIF5AQ12840 1032 aa14.34□□□□□ -0.11
CHD1L-202ENST00000369258 PDCLQ13371 301 aa14.34□□□□□ -0.11
CHD1L-202ENST00000369258 KCNK18Q7Z418 384 aa14.34□□□□□ -0.11
CHD1L-202ENST00000369258 MICALL1Q8N3F8 863 aa14.34□□□□□ -0.11
CHD1L-202ENST00000369258 COA7Q96BR5 231 aa14.34□□□□□ -0.11
CHD1L-202ENST00000369258 CENPHQ9H3R5 247 aa14.34□□□□□ -0.11
CHD1L-202ENST00000369258 MAD2L2Q9UI95 211 aa14.34□□□□□ -0.11
CHD1L-202ENST00000369258 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.34□□□□□ -0.11
CHD1L-202ENST00000369258 PDS5AQ29RF7 1337 aaKnown RBP14.34□□□□□ -0.11
CHD1L-202ENST00000369258 ERVV-1B6SEH8 477 aa14.34□□□□□ -0.11
CHD1L-202ENST00000369258 AKR1B10O60218 316 aa14.34□□□□□ -0.11
CHD1L-202ENST00000369258 FBXW10Q5XX13 1052 aa14.34□□□□□ -0.11
CHD1L-202ENST00000369258 SECISBP2LQ93073 1101 aaKnown RBP14.34□□□□□ -0.11
CHD1L-202ENST00000369258 MTMR8Q96EF0 704 aa14.34□□□□□ -0.11
CHD1L-202ENST00000369258 TRIM9Q9C026 710 aa14.34□□□□□ -0.11
CHD1L-202ENST00000369258 TTYH3Q9C0H2 523 aa14.34□□□□□ -0.11
CHD1L-202ENST00000369258 RBM12Q9NTZ6 932 aaKnown RBP14.34□□□□□ -0.11
CHD1L-202ENST00000369258 JRKLQ9Y4A0 524 aa14.34□□□□□ -0.11
CHD1L-202ENST00000369258 TSPY3P0CV98 308 aa14.33□□□□□ -0.12
CHD1L-202ENST00000369258 TSPY8P0CW00 308 aa14.33□□□□□ -0.12
CHD1L-202ENST00000369258 SLC1A4P43007 532 aa14.33□□□□□ -0.12
CHD1L-202ENST00000369258 NAPAP54920 295 aa14.33□□□□□ -0.12
CHD1L-202ENST00000369258 MEA1Q16626 185 aa14.33□□□□□ -0.12
CHD1L-202ENST00000369258 TDRD12Q587J7 1177 aaKnown RBP14.33□□□□□ -0.12
CHD1L-202ENST00000369258 TBC1D9BQ66K14 1250 aa14.33□□□□□ -0.12
CHD1L-202ENST00000369258 ARL6IP4Q66PJ3 421 aaKnown RBP14.33□□□□□ -0.12
CHD1L-202ENST00000369258 DZIP1Q86YF9 867 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms