RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 FOSP01100 380 aaPredicted RBP27.17■■□□□ 1.94
SNX3-203ENST00000368979 PFKFB1P16118 471 aa27.17■■□□□ 1.94
SNX3-203ENST00000368979 NDUFA8P51970 172 aa27.17■■□□□ 1.94
SNX3-203ENST00000368979 ZNF445P59923 1031 aa27.17■■□□□ 1.94
SNX3-203ENST00000368979 TREML2Q5T2D2 321 aa27.17■■□□□ 1.94
SNX3-203ENST00000368979 ARL6IP4Q66PJ3 421 aaKnown RBP27.17■■□□□ 1.94
SNX3-203ENST00000368979 FMR1NBQ8N0W7 255 aaPredicted RBP27.17■■□□□ 1.94
SNX3-203ENST00000368979 WNK4Q96J92 1243 aa27.17■■□□□ 1.94
SNX3-203ENST00000368979 RAVER2Q9HCJ3 691 aaKnown RBP27.17■■□□□ 1.94
SNX3-203ENST00000368979 COL11A1P12107 1806 aaPredicted RBP27.17■■□□□ 1.94
SNX3-203ENST00000368979 A0A0G2JMZ2 1700 aa27.17■■□□□ 1.94
SNX3-203ENST00000368979 LAD1O00515 517 aa27.16■■□□□ 1.94
SNX3-203ENST00000368979 CLSTN2Q9H4D0 955 aa27.16■■□□□ 1.94
SNX3-203ENST00000368979 MYH7BA7E2Y1 1941 aa27.16■■□□□ 1.94
SNX3-203ENST00000368979 OAZ1P54368 228 aa27.16■■□□□ 1.94
SNX3-203ENST00000368979 CPXCR1Q8N123 301 aa27.16■■□□□ 1.94
SNX3-203ENST00000368979 CRYGNQ8WXF5 182 aa27.16■■□□□ 1.94
SNX3-203ENST00000368979 CSRNP2Q9H175 543 aa27.16■■□□□ 1.94
SNX3-203ENST00000368979 NUP62CLQ9H1M0 184 aa27.16■■□□□ 1.94
SNX3-203ENST00000368979 TMEM60Q9H2L4 133 aa27.16■■□□□ 1.94
SNX3-203ENST00000368979 GBA2Q9HCG7 927 aaPredicted RBP27.16■■□□□ 1.94
SNX3-203ENST00000368979 CTDP1Q9Y5B0 961 aaPredicted RBP27.16■■□□□ 1.94
SNX3-203ENST00000368979 SPDYE16A6NNV3 312 aaPredicted RBP27.15■■□□□ 1.94
SNX3-203ENST00000368979 GCOM1H8Y6P7 765 aaPredicted RBP27.15■■□□□ 1.94
SNX3-203ENST00000368979 POLR2MP0CAP2 368 aa27.15■■□□□ 1.94
SNX3-203ENST00000368979 GJA5P36382 358 aa27.15■■□□□ 1.94
SNX3-203ENST00000368979 GHRHRQ02643 423 aa27.15■■□□□ 1.94
SNX3-203ENST00000368979 CLEC4DQ8WXI8 215 aa27.15■■□□□ 1.94
SNX3-203ENST00000368979 SYCE3A1L190 88 aa27.14■■□□□ 1.94
SNX3-203ENST00000368979 SPDYE3A6NKU9 549 aa27.14■■□□□ 1.94
SNX3-203ENST00000368979 NEMFO60524 1076 aa27.14■■□□□ 1.94
SNX3-203ENST00000368979 CFBP00751 764 aa27.14■■□□□ 1.94
SNX3-203ENST00000368979 HOXA7P31268 230 aaPredicted RBP27.14■■□□□ 1.94
SNX3-203ENST00000368979 HOXA13P31271 388 aaPredicted RBP27.14■■□□□ 1.94
SNX3-203ENST00000368979 PRPHP41219 470 aa27.14■■□□□ 1.94
SNX3-203ENST00000368979 IL17AQ16552 155 aa27.14■■□□□ 1.94
SNX3-203ENST00000368979 PPP4R3AQ6IN85 833 aa27.14■■□□□ 1.94
SNX3-203ENST00000368979 GADL1Q6ZQY3 521 aa27.14■■□□□ 1.94
SNX3-203ENST00000368979 TBC1D5Q92609 795 aa27.14■■□□□ 1.94
SNX3-203ENST00000368979 HOXC10Q9NYD6 342 aa27.14■■□□□ 1.94
SNX3-203ENST00000368979 ATP2A1O14983 1001 aa27.13■■□□□ 1.93
SNX3-203ENST00000368979 LETM1O95202 739 aaPredicted RBP27.13■■□□□ 1.93
SNX3-203ENST00000368979 TDP2O95551 362 aa27.13■■□□□ 1.93
SNX3-203ENST00000368979 USP11P51784 963 aa27.13■■□□□ 1.93
SNX3-203ENST00000368979 MOGSQ13724 837 aa27.13■■□□□ 1.93
SNX3-203ENST00000368979 SLC10A4Q96EP9 437 aa27.13■■□□□ 1.93
SNX3-203ENST00000368979 NAP1L4Q99733 375 aaKnown RBP27.13■■□□□ 1.93
SNX3-203ENST00000368979 VWA3AA6NCI4 1184 aa27.12■■□□□ 1.93
SNX3-203ENST00000368979 CELF2O95319 508 aaKnown RBP27.12■■□□□ 1.93
SNX3-203ENST00000368979 ALAS1P13196 640 aa27.12■■□□□ 1.93
SNX3-203ENST00000368979 GCFC2P16383 781 aaKnown RBP27.12■■□□□ 1.93
SNX3-203ENST00000368979 SREBF1P36956 1147 aa27.12■■□□□ 1.93
SNX3-203ENST00000368979 HSD17B4P51659 736 aa27.12■■□□□ 1.93
SNX3-203ENST00000368979 SPECC1Q5M775 1068 aa27.12■■□□□ 1.93
SNX3-203ENST00000368979 CHADLQ6NUI6 762 aa27.12■■□□□ 1.93
SNX3-203ENST00000368979 ZNF214Q9UL59 606 aaPredicted RBP27.12■■□□□ 1.93
SNX3-203ENST00000368979 KINO60870 393 aaKnown RBP27.11■■□□□ 1.93
SNX3-203ENST00000368979 ITGBL1O95965 494 aaPredicted RBP27.11■■□□□ 1.93
SNX3-203ENST00000368979 OR52Z1P0C646 297 aa27.11■■□□□ 1.93
SNX3-203ENST00000368979 MOXD1Q6UVY6 613 aa27.11■■□□□ 1.93
SNX3-203ENST00000368979 C2orf69Q8N8R5 385 aa27.11■■□□□ 1.93
SNX3-203ENST00000368979 FAM13BQ9NYF5 915 aa27.11■■□□□ 1.93
SNX3-203ENST00000368979 AGTPBP1Q9UPW5 1226 aa27.11■■□□□ 1.93
SNX3-203ENST00000368979 NFIBO00712 420 aa27.11■■□□□ 1.93
SNX3-203ENST00000368979 SLC37A4O43826 429 aa27.11■■□□□ 1.93
SNX3-203ENST00000368979 SYKP43405 635 aa27.11■■□□□ 1.93
SNX3-203ENST00000368979 ARHGAP4P98171 946 aa27.11■■□□□ 1.93
SNX3-203ENST00000368979 TMEM132BQ14DG7 1078 aa27.11■■□□□ 1.93
SNX3-203ENST00000368979 RBM43Q6ZSC3 357 aaKnown RBP27.11■■□□□ 1.93
SNX3-203ENST00000368979 POTEDQ86YR6 584 aa27.11■■□□□ 1.93
SNX3-203ENST00000368979 MCF2L2Q86YR7 1114 aa27.11■■□□□ 1.93
SNX3-203ENST00000368979 SAMD3Q8N6K7 520 aa27.11■■□□□ 1.93
SNX3-203ENST00000368979 MBOAT7Q96N66 472 aa27.11■■□□□ 1.93
SNX3-203ENST00000368979 TNMDQ9H2S6 317 aa27.11■■□□□ 1.93
SNX3-203ENST00000368979 CYP3A7-CYP3A51PA0A087WV96 503 aa27.1■■□□□ 1.93
SNX3-203ENST00000368979 ZNF202O95125 648 aa27.1■■□□□ 1.93
SNX3-203ENST00000368979 CYP3A7P24462 503 aa27.1■■□□□ 1.93
SNX3-203ENST00000368979 MUM1L1Q5H9M0 696 aa27.1■■□□□ 1.93
SNX3-203ENST00000368979 FASTKD5Q7L8L6 764 aaKnown RBP27.1■■□□□ 1.93
SNX3-203ENST00000368979 MTMR9Q96QG7 549 aa27.1■■□□□ 1.93
SNX3-203ENST00000368979 KCNH3Q9ULD8 1083 aa27.1■■□□□ 1.93
SNX3-203ENST00000368979 TRPM7Q96QT4 1865 aa27.09■■□□□ 1.93
SNX3-203ENST00000368979 LONP1P36776 959 aaKnown RBP27.09■■□□□ 1.93
SNX3-203ENST00000368979 SNAPC2Q13487 334 aa27.09■■□□□ 1.93
SNX3-203ENST00000368979 CAMK4Q16566 473 aa27.09■■□□□ 1.93
SNX3-203ENST00000368979 LRSAM1Q6UWE0 723 aa27.09■■□□□ 1.93
SNX3-203ENST00000368979 DTHD1Q6ZMT9 781 aa27.09■■□□□ 1.93
SNX3-203ENST00000368979 USP49Q70CQ1 688 aa27.09■■□□□ 1.93
SNX3-203ENST00000368979 MAP3K20Q9NYL2 800 aaKnown RBP27.09■■□□□ 1.93
SNX3-203ENST00000368979 DDX25Q9UHL0 483 aaKnown RBP27.09■■□□□ 1.93
SNX3-203ENST00000368979 CYP3A4P08684 503 aa27.08■■□□□ 1.93
SNX3-203ENST00000368979 SNRNP48Q6IEG0 339 aaKnown RBP27.08■■□□□ 1.93
SNX3-203ENST00000368979 LBX2Q6XYB7 198 aa27.08■■□□□ 1.93
SNX3-203ENST00000368979 FCHSD1Q86WN1 690 aa27.08■■□□□ 1.93
SNX3-203ENST00000368979 SYMPKQ92797 1274 aaKnown RBP27.08■■□□□ 1.93
SNX3-203ENST00000368979 TIGD1Q96MW7 591 aa27.08■■□□□ 1.93
SNX3-203ENST00000368979 TRERF1Q96PN7 1200 aa27.08■■□□□ 1.93
SNX3-203ENST00000368979 TEX13BQ9BXU2 312 aa27.08■■□□□ 1.93
SNX3-203ENST00000368979 RIPK3Q9Y572 518 aa27.08■■□□□ 1.93
SNX3-203ENST00000368979 CST9Q5W186 159 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms