RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 TAX1BP1Q86VP1 789 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 NLRP14Q86W24 1093 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 FAM114A1Q8IWE2 563 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 VGLL2Q8N8G2 317 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 RNPC3Q96LT9 517 aaKnown RBP11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 ERGIC2Q96RQ1 377 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 RBM28Q9NW13 759 aaKnown RBP11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 MYH10P35580 1976 aa11.69□□□□□ -0.54
LYSMD1-201ENST00000368908 GOLGA6L7A0A1B0GV03 622 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 RASSF10A6NK89 507 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 GSG1L2A8MUP6 293 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 ERVV-2B6SEH9 535 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 WNT7AO00755 349 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 MBD4O95243 580 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 MDH1P40925 334 aaKnown RBP11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 MRPL12P52815 198 aaKnown RBP11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 SEC23AQ15436 765 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 ZNF174Q15697 407 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 CCDC181Q5TID7 509 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 TTI2Q6NXR4 508 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 CCDC13Q8IYE1 715 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 DHTKD1Q96HY7 919 aaPredicted RBP11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 TRIM47Q96LD4 638 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 NACAP1Q9BZK3 213 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 ZBTB3Q9H5J0 574 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 AGPAT5Q9NUQ2 364 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 LRWD1Q9UFC0 647 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 CAPN6Q9Y6Q1 641 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 MYH1P12882 1939 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 ZNF233A6NK53 670 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 PJA2O43164 708 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 NPY5RQ15761 445 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 ARFGAP2Q8N6H7 521 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 WHAMMQ8TF30 809 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 NUP133Q8WUM0 1156 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 ATP6V1G3Q96LB4 118 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 CCT8L2Q96SF2 557 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 TUBGCP2Q9BSJ2 902 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 DUSP10Q9Y6W6 482 aa11.68□□□□□ -0.54
LYSMD1-201ENST00000368908 TRIM49BA6NDI0 452 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 B4DLN1 442 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 ZNF263O14978 683 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 RHOBTB3O94955 611 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 NF2P35240 595 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 PPP1R2P41236 205 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 PPARAQ07869 468 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 CCDC96Q2M329 555 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 FAM182BQ5T319 152 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 ZSCAN29Q8IWY8 852 aaPredicted RBP11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 CCDC82Q8N4S0 544 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 SH2D3CQ8N5H7 860 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 EIF1ADQ8N9N8 165 aaKnown RBP11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 TTLL11Q8NHH1 800 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 CCDC42Q96M95 316 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 CCDC43Q96MW1 224 aaKnown RBP11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 UBAC1Q9BSL1 405 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 IFIH1Q9BYX4 1025 aaKnown RBP11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 SLC40A1Q9NP59 571 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 PCDHA13Q9Y5I0 950 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 ANKRD36CQ5JPF3 1778 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 ATP1A2P50993 1020 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 SLC7A5Q01650 507 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 TBC1D8BQ0IIM8 1120 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 CEP85LQ5SZL2 805 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 LRIG3Q6UXM1 1119 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 CMTR1Q8N1G2 835 aaKnown RBP11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 GIMAP8Q8ND71 665 aaPredicted RBP11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 P3H4Q92791 437 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 VEZTQ9HBM0 779 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 CD248Q9HCU0 757 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 PLAGL2Q9UPG8 496 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 UTRNP46939 3433 aa11.67□□□□□ -0.54
LYSMD1-201ENST00000368908 DUOX1Q9NRD9 1551 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 BICDL2A1A5D9 508 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 GRID2IPA4D2P6 1211 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 PES1O00541 588 aaKnown RBP11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 CALM1P0DP23 149 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 CALM2P0DP24 149 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 CALM3P0DP25 149 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 STAT6P42226 847 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 CDR1P51861 262 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 PMS1P54277 932 aaKnown RBP11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 CYP27A1Q02318 531 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 MAP3K12Q12852 859 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 RRP12Q5JTH9 1297 aaKnown RBP11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 NFRKBQ6P4R8 1299 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 ZBTB38Q8NAP3 1195 aaPredicted RBP11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 PIK3R5Q8WYR1 880 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 MIEF2Q96C03 454 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 ZKSCAN3Q9BRR0 538 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 LY75O60449 1722 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 ZNF831Q5JPB2 1677 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 KLRC4O43908 158 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 TRIM37O94972 964 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 KRT14P02533 472 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 GCFC2P16383 781 aaKnown RBP11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 TDO2P48775 406 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 HDLBPQ00341 1268 aaKnown RBP11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 GUCY1A3Q02108 690 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms