RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 LARSQ9P2J5 1176 aaKnown RBP19.61■□□□□ 0.73
SNX27-203ENST00000368843 SEMA3EO15041 775 aa19.61■□□□□ 0.73
SNX27-203ENST00000368843 THAP12O43422 761 aa19.61■□□□□ 0.73
SNX27-203ENST00000368843 MIGA2Q7L4E1 593 aa19.61■□□□□ 0.73
SNX27-203ENST00000368843 RFX6Q8HWS3 928 aa19.61■□□□□ 0.73
SNX27-203ENST00000368843 CHMP6Q96FZ7 201 aa19.61■□□□□ 0.73
SNX27-203ENST00000368843 AMNQ9BXJ7 453 aa19.61■□□□□ 0.73
SNX27-203ENST00000368843 PUS3Q9BZE2 481 aaKnown RBP19.61■□□□□ 0.73
SNX27-203ENST00000368843 ADGBQ8N7X0 1667 aa19.61■□□□□ 0.73
SNX27-203ENST00000368843 ECE1P42892 770 aa19.61■□□□□ 0.73
SNX27-203ENST00000368843 FOXD4Q12950 439 aaPredicted RBP19.6■□□□□ 0.73
SNX27-203ENST00000368843 RSRC2Q7L4I2 434 aaKnown RBP19.6■□□□□ 0.73
SNX27-203ENST00000368843 DDX41Q9UJV9 622 aaKnown RBP19.6■□□□□ 0.73
SNX27-203ENST00000368843 RGS16O15492 202 aaPredicted RBP19.6■□□□□ 0.73
SNX27-203ENST00000368843 IRAK4Q9NWZ3 460 aa19.6■□□□□ 0.73
SNX27-203ENST00000368843 S100BP04271 92 aaPredicted RBP19.6■□□□□ 0.73
SNX27-203ENST00000368843 PTGDRQ13258 359 aa19.6■□□□□ 0.73
SNX27-203ENST00000368843 PGBD1Q96JS3 809 aa19.6■□□□□ 0.73
SNX27-203ENST00000368843 MAD1L1Q9Y6D9 718 aa19.6■□□□□ 0.73
SNX27-203ENST00000368843 M0R2C6 588 aa19.6■□□□□ 0.73
SNX27-203ENST00000368843 POLR2BP30876 1174 aaKnown RBP19.6■□□□□ 0.73
SNX27-203ENST00000368843 ANKRD20A3Q5VUR7 823 aa19.6■□□□□ 0.73
SNX27-203ENST00000368843 EAF2Q96CJ1 260 aaPredicted RBP19.6■□□□□ 0.73
SNX27-203ENST00000368843 KIAA0232Q92628 1395 aa19.6■□□□□ 0.73
SNX27-203ENST00000368843 PLEKHG3A1L390 1219 aa19.6■□□□□ 0.73
SNX27-203ENST00000368843 RNF8O76064 485 aa19.6■□□□□ 0.73
SNX27-203ENST00000368843 STX2P32856 288 aa19.6■□□□□ 0.73
SNX27-203ENST00000368843 LTKP29376 864 aa19.6■□□□□ 0.73
SNX27-203ENST00000368843 ASPRV1Q53RT3 343 aa19.6■□□□□ 0.73
SNX27-203ENST00000368843 BFSP1Q12934 665 aa19.59■□□□□ 0.73
SNX27-203ENST00000368843 ADD3Q9UEY8 706 aaKnown RBP19.59■□□□□ 0.73
SNX27-203ENST00000368843 WDR17Q8IZU2 1322 aa19.59■□□□□ 0.73
SNX27-203ENST00000368843 RBBP5Q15291 538 aaKnown RBP19.59■□□□□ 0.73
SNX27-203ENST00000368843 PTPN21Q16825 1174 aa19.59■□□□□ 0.73
SNX27-203ENST00000368843 KMT5AQ9NQR1 393 aa19.59■□□□□ 0.73
SNX27-203ENST00000368843 ATP10DQ9P241 1426 aa19.59■□□□□ 0.73
SNX27-203ENST00000368843 YEATS2Q9ULM3 1422 aa19.59■□□□□ 0.73
SNX27-203ENST00000368843 ZNF827Q17R98 1081 aa19.59■□□□□ 0.73
SNX27-203ENST00000368843 SAR1BQ9Y6B6 198 aa19.59■□□□□ 0.73
SNX27-203ENST00000368843 UBN2Q6ZU65 1347 aa19.59■□□□□ 0.73
SNX27-203ENST00000368843 ZBTB33Q86T24 672 aa19.59■□□□□ 0.73
SNX27-203ENST00000368843 PDE8BO95263 885 aa19.59■□□□□ 0.73
SNX27-203ENST00000368843 STAT2P52630 851 aa19.58■□□□□ 0.73
SNX27-203ENST00000368843 DALRD3Q5D0E6 543 aaKnown RBP19.58■□□□□ 0.73
SNX27-203ENST00000368843 PNMA8AQ86V59 439 aaPredicted RBP19.58■□□□□ 0.73
SNX27-203ENST00000368843 USP44Q9H0E7 712 aa19.58■□□□□ 0.73
SNX27-203ENST00000368843 SMYD2Q9NRG4 433 aa19.58■□□□□ 0.73
SNX27-203ENST00000368843 TPCN1Q9ULQ1 816 aa19.58■□□□□ 0.73
SNX27-203ENST00000368843 CLIC4Q9Y696 253 aa19.58■□□□□ 0.73
SNX27-203ENST00000368843 CTNNA1P35221 906 aaKnown RBP19.58■□□□□ 0.73
SNX27-203ENST00000368843 NSFP46459 744 aaKnown RBP19.58■□□□□ 0.73
SNX27-203ENST00000368843 ATP6V0A1Q93050 837 aa19.58■□□□□ 0.73
SNX27-203ENST00000368843 DPH5Q9H2P9 285 aa19.58■□□□□ 0.73
SNX27-203ENST00000368843 MYOM2P54296 1465 aa19.58■□□□□ 0.73
SNX27-203ENST00000368843 GBP7Q8N8V2 638 aaPredicted RBP19.58■□□□□ 0.72
SNX27-203ENST00000368843 TRIM58Q8NG06 486 aa19.58■□□□□ 0.72
SNX27-203ENST00000368843 HDAC11Q96DB2 347 aa19.58■□□□□ 0.72
SNX27-203ENST00000368843 SEC31BQ9NQW1 1179 aa19.58■□□□□ 0.72
SNX27-203ENST00000368843 PEG3Q9GZU2 1588 aa19.58■□□□□ 0.72
SNX27-203ENST00000368843 GOLGA8CPA6NN73 597 aa19.58■□□□□ 0.72
SNX27-203ENST00000368843 BTBD18B2RXH4 712 aa19.58■□□□□ 0.72
SNX27-203ENST00000368843 TROVE2P10155 538 aaKnown RBP eCLIP19.58■□□□□ 0.72
SNX27-203ENST00000368843 ATF2P15336 505 aa19.58■□□□□ 0.72
SNX27-203ENST00000368843 OR8K1Q8NGG5 319 aa19.58■□□□□ 0.72
SNX27-203ENST00000368843 EFCC1Q9HA90 598 aa19.58■□□□□ 0.72
SNX27-203ENST00000368843 PTPN22Q9Y2R2 807 aa19.58■□□□□ 0.72
SNX27-203ENST00000368843 PFKFB2O60825 505 aa19.57■□□□□ 0.72
SNX27-203ENST00000368843 RFC1P35251 1148 aaPredicted RBP19.57■□□□□ 0.72
SNX27-203ENST00000368843 KIAA1468Q9P260 1216 aa19.57■□□□□ 0.72
SNX27-203ENST00000368843 BLMP54132 1417 aaPredicted RBP19.57■□□□□ 0.72
SNX27-203ENST00000368843 FOSP01100 380 aaPredicted RBP19.57■□□□□ 0.72
SNX27-203ENST00000368843 MFAP3P55082 362 aa19.57■□□□□ 0.72
SNX27-203ENST00000368843 SLC7A3Q8WY07 619 aa19.57■□□□□ 0.72
SNX27-203ENST00000368843 DDX27Q96GQ7 796 aaKnown RBP19.57■□□□□ 0.72
SNX27-203ENST00000368843 DESI2Q9BSY9 194 aa19.57■□□□□ 0.72
SNX27-203ENST00000368843 GTPBP6O43824 516 aaPredicted RBP19.57■□□□□ 0.72
SNX27-203ENST00000368843 CLNS1AP54105 237 aaKnown RBP19.57■□□□□ 0.72
SNX27-203ENST00000368843 TRIM68Q6AZZ1 485 aa19.57■□□□□ 0.72
SNX27-203ENST00000368843 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.57■□□□□ 0.72
SNX27-203ENST00000368843 KRT3P12035 628 aa19.57■□□□□ 0.72
SNX27-203ENST00000368843 LONP1P36776 959 aaKnown RBP19.57■□□□□ 0.72
SNX27-203ENST00000368843 RAPH1Q70E73 1250 aa19.57■□□□□ 0.72
SNX27-203ENST00000368843 RASGRP4Q8TDF6 673 aa19.57■□□□□ 0.72
SNX27-203ENST00000368843 SGK1O00141 431 aa19.57■□□□□ 0.72
SNX27-203ENST00000368843 GARSP41250 739 aaKnown RBP19.57■□□□□ 0.72
SNX27-203ENST00000368843 PTK2Q05397 1052 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 CCDC17Q96LX7 622 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 LMNB1P20700 586 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 LMNTD2Q8IXW0 634 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 METTL14Q9HCE5 456 aaKnown RBP19.56■□□□□ 0.72
SNX27-203ENST00000368843 PCDHA4Q9UN74 947 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 MARK3P27448 753 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 IREB2P48200 963 aaKnown RBP19.56■□□□□ 0.72
SNX27-203ENST00000368843 IL1RL1Q01638 556 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 EXOC3L4Q17RC7 722 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 FAM26FQ5R3K3 315 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 TSC1Q92574 1164 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 ZNF148Q9UQR1 794 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 ZBTB1Q9Y2K1 713 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 KIF24Q5T7B8 1368 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms