RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 CLMNQ96JQ2 1002 aa10.88□□□□□ -0.67
VTA1-201ENST00000367621 RIC8AQ9NPQ8 531 aa10.88□□□□□ -0.67
VTA1-201ENST00000367621 TSR3Q9UJK0 312 aaKnown RBP10.88□□□□□ -0.67
VTA1-201ENST00000367621 PCDHB6Q9Y5E3 794 aa10.88□□□□□ -0.67
VTA1-201ENST00000367621 MORC2Q9Y6X9 1032 aaPredicted RBP10.88□□□□□ -0.67
VTA1-201ENST00000367621 TRIM75PA6NK02 468 aa10.87□□□□□ -0.67
VTA1-201ENST00000367621 PPP1R12BO60237 982 aaPredicted RBP10.87□□□□□ -0.67
VTA1-201ENST00000367621 IREB2P48200 963 aaKnown RBP10.87□□□□□ -0.67
VTA1-201ENST00000367621 USP14P54578 494 aa10.87□□□□□ -0.67
VTA1-201ENST00000367621 LAPTM4AQ15012 233 aa10.87□□□□□ -0.67
VTA1-201ENST00000367621 CSPP1Q1MSJ5 1256 aa10.87□□□□□ -0.67
VTA1-201ENST00000367621 RILPL1Q5EBL4 403 aa10.87□□□□□ -0.67
VTA1-201ENST00000367621 Q6ZNB5 142 aa10.87□□□□□ -0.67
VTA1-201ENST00000367621 PIK3AP1Q6ZUJ8 805 aa10.87□□□□□ -0.67
VTA1-201ENST00000367621 FAM160B2Q86V87 743 aa10.87□□□□□ -0.67
VTA1-201ENST00000367621 CCDC12Q8WUD4 166 aaPredicted RBP10.87□□□□□ -0.67
VTA1-201ENST00000367621 CHURC1Q8WUH1 139 aa10.87□□□□□ -0.67
VTA1-201ENST00000367621 P2RX7Q99572 595 aaKnown RBP10.87□□□□□ -0.67
VTA1-201ENST00000367621 FEZ1Q99689 392 aa10.87□□□□□ -0.67
VTA1-201ENST00000367621 AS3MTQ9HBK9 375 aa10.87□□□□□ -0.67
VTA1-201ENST00000367621 BRMS1Q9HCU9 246 aa10.87□□□□□ -0.67
VTA1-201ENST00000367621 C6orf50Q9HD87 102 aa10.87□□□□□ -0.67
VTA1-201ENST00000367621 NMRK2Q9NPI5 230 aa10.87□□□□□ -0.67
VTA1-201ENST00000367621 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.87□□□□□ -0.67
VTA1-201ENST00000367621 TMEM260Q9NX78 707 aa10.87□□□□□ -0.67
VTA1-201ENST00000367621 SEPT9Q9UHD8 586 aaPredicted RBP10.87□□□□□ -0.67
VTA1-201ENST00000367621 ISY1Q9ULR0 285 aaKnown RBP10.87□□□□□ -0.67
VTA1-201ENST00000367621 PCDHA7Q9UN72 937 aa10.87□□□□□ -0.67
VTA1-201ENST00000367621 PCDHA1Q9Y5I3 950 aa10.87□□□□□ -0.67
VTA1-201ENST00000367621 DDX49Q9Y6V7 483 aaKnown RBP10.87□□□□□ -0.67
VTA1-201ENST00000367621 ZNF536O15090 1300 aa10.86□□□□□ -0.67
VTA1-201ENST00000367621 BAZ2BQ9UIF8 2168 aaKnown RBP10.86□□□□□ -0.67
VTA1-201ENST00000367621 MYH8P13535 1937 aa10.86□□□□□ -0.67
VTA1-201ENST00000367621 PAPPA2Q9BXP8 1791 aa10.86□□□□□ -0.67
VTA1-201ENST00000367621 C19orf81C9J6K1 198 aa10.86□□□□□ -0.67
VTA1-201ENST00000367621 SPTLC2O15270 562 aa10.86□□□□□ -0.67
VTA1-201ENST00000367621 LIG1P18858 919 aa10.86□□□□□ -0.67
VTA1-201ENST00000367621 GNA11P29992 359 aa10.86□□□□□ -0.67
VTA1-201ENST00000367621 TRAPPC10P48553 1259 aa10.86□□□□□ -0.67
VTA1-201ENST00000367621 HMGCS2P54868 508 aa10.86□□□□□ -0.67
VTA1-201ENST00000367621 FBXO11Q86XK2 927 aa10.86□□□□□ -0.67
VTA1-201ENST00000367621 C4orf32Q8N8J7 132 aa10.86□□□□□ -0.67
VTA1-201ENST00000367621 KCNG4Q8TDN1 519 aa10.86□□□□□ -0.67
VTA1-201ENST00000367621 KIFC2Q96AC6 838 aa10.86□□□□□ -0.67
VTA1-201ENST00000367621 SLF1Q9BQI6 1058 aa10.86□□□□□ -0.67
VTA1-201ENST00000367621 AMNQ9BXJ7 453 aa10.86□□□□□ -0.67
VTA1-201ENST00000367621 RPAP3Q9H6T3 665 aaPredicted RBP10.86□□□□□ -0.67
VTA1-201ENST00000367621 TMEM63CQ9P1W3 806 aa10.86□□□□□ -0.67
VTA1-201ENST00000367621 BIN2Q9UBW5 565 aaPredicted RBP10.86□□□□□ -0.67
VTA1-201ENST00000367621 MRVI1Q9Y6F6 885 aa10.86□□□□□ -0.67
VTA1-201ENST00000367621 SCN4AP35499 1836 aa10.86□□□□□ -0.67
VTA1-201ENST00000367621 SPDYE5A6NIY4 337 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 DPYSL4O14531 572 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 MEIS2O14770 477 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 PPP6R2O75170 966 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 MBD3O95983 291 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 MARCKSP29966 332 aaPredicted RBP10.85□□□□□ -0.67
VTA1-201ENST00000367621 GJA5P36382 358 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 ADCY7P51828 1080 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 IKQ13123 557 aaPredicted RBP10.85□□□□□ -0.67
VTA1-201ENST00000367621 MOGSQ13724 837 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 STK38Q15208 465 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 UBE2SQ16763 222 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 JAKMIP3Q5VZ66 844 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 KRT25Q7Z3Z0 450 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 LDHDQ86WU2 507 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 ANKRD13AQ8IZ07 590 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 PRPF38AQ8NAV1 312 aaKnown RBP10.85□□□□□ -0.67
VTA1-201ENST00000367621 REPS2Q8NFH8 660 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 GOLPH3LQ9H4A5 285 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 PSTPIP2Q9H939 334 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 ELP3Q9H9T3 547 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 SLC38A10Q9HBR0 1119 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.85□□□□□ -0.67
VTA1-201ENST00000367621 FBXO2Q9UK22 296 aaPredicted RBP10.85□□□□□ -0.67
VTA1-201ENST00000367621 PPP1R9AQ9ULJ8 1098 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 ADAMTS5Q9UNA0 930 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 KCNH4Q9UQ05 1017 aa10.85□□□□□ -0.67
VTA1-201ENST00000367621 MYH4Q9Y623 1939 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 FAM237AA0A1B0GTK4 181 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 A0A1W2PQ27 194 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 A0A1W2PQ64 194 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 A0A1W2PQD8 194 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 USP17L15C9J2P7 530 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 USP17L13C9JLJ4 530 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 USP17L11C9JVI0 530 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 USP17L18D6R9N7 530 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 USP17L22D6RA61 530 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 USP17L17D6RBQ6 530 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 USP17L19D6RCP7 530 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 USP17L20D6RJB6 530 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 CXCL11O14625 94 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 IRF6O14896 467 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 ATP2B1P20020 1258 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 NF2P35240 595 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 GRIN1Q05586 938 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 PPATQ06203 517 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 USP17L24Q0WX57 530 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 ZNF174Q15697 407 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 INF2Q27J81 1249 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms