RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 LZICQ8WZA0 190 aa13.48□□□□□ -0.25
TPR-201ENST00000367478 PANK4Q9NVE7 773 aa13.48□□□□□ -0.25
TPR-201ENST00000367478 CPSF3Q9UKF6 684 aaKnown RBP13.48□□□□□ -0.25
TPR-201ENST00000367478 PCP11498 1178 aaKnown RBP13.48□□□□□ -0.25
TPR-201ENST00000367478 CHCHD3Q9NX63 227 aaKnown RBP13.48□□□□□ -0.25
TPR-201ENST00000367478 ZBBXA8MT70 800 aa13.48□□□□□ -0.25
TPR-201ENST00000367478 CCDC159P0C7I6 412 aa13.48□□□□□ -0.25
TPR-201ENST00000367478 ESRRAP11474 423 aaPredicted RBP13.48□□□□□ -0.25
TPR-201ENST00000367478 FSCBQ5H9T9 825 aa13.48□□□□□ -0.25
TPR-201ENST00000367478 MAEAQ7L5Y9 396 aa13.48□□□□□ -0.25
TPR-201ENST00000367478 STX19Q8N4C7 294 aa13.48□□□□□ -0.25
TPR-201ENST00000367478 ZBTB18Q99592 522 aa13.48□□□□□ -0.25
TPR-201ENST00000367478 IQANK1A0A1B0GTG1 560 aa13.48□□□□□ -0.25
TPR-201ENST00000367478 CUL1Q13616 776 aa13.48□□□□□ -0.25
TPR-201ENST00000367478 MMS19Q96T76 1030 aa13.48□□□□□ -0.25
TPR-201ENST00000367478 ZBTB40Q9NUA8 1239 aa13.48□□□□□ -0.25
TPR-201ENST00000367478 CAPN11Q9UMQ6 739 aa13.48□□□□□ -0.25
TPR-201ENST00000367478 SNX5Q9Y5X3 404 aa13.48□□□□□ -0.25
TPR-201ENST00000367478 CRLF3Q8IUI8 442 aa13.48□□□□□ -0.25
TPR-201ENST00000367478 PHKBQ93100 1093 aa13.48□□□□□ -0.25
TPR-201ENST00000367478 OLFM3Q96PB7 478 aa13.48□□□□□ -0.25
TPR-201ENST00000367478 SUN2Q9UH99 717 aa13.48□□□□□ -0.25
TPR-201ENST00000367478 CCDC151A5D8V7 595 aa13.48□□□□□ -0.25
TPR-201ENST00000367478 DDX5P17844 614 aaKnown RBP13.48□□□□□ -0.25
TPR-201ENST00000367478 ADCY2Q08462 1091 aa13.48□□□□□ -0.25
TPR-201ENST00000367478 TMCC1O94876 653 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 LONRF3Q496Y0 759 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 ANLNQ9NQW6 1124 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 LCMT1Q9UIC8 334 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 PPIP5K1Q6PFW1 1433 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 PPP1R12AO14974 1030 aaPredicted RBP13.47□□□□□ -0.25
TPR-201ENST00000367478 PAMP19021 973 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 ATP2B4P23634 1241 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 HIBADHP31937 336 aaKnown RBP13.47□□□□□ -0.25
TPR-201ENST00000367478 PIK3CAP42336 1068 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 CYP2J2P51589 502 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 DMTNQ08495 405 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 ENOX1Q8TC92 643 aaKnown RBP13.47□□□□□ -0.25
TPR-201ENST00000367478 FLT4P35916 1363 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 TMEM191BP0C7N4 346 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 MFAP3P55082 362 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 PGRMC1O00264 195 aaKnown RBP13.47□□□□□ -0.25
TPR-201ENST00000367478 MED7O43513 233 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 THOC5Q13769 683 aaKnown RBP13.47□□□□□ -0.25
TPR-201ENST00000367478 SKAP1Q86WV1 359 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 KIF2CQ99661 725 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 MROH5Q6ZUA9 1318 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 NR1H3Q13133 447 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 TRMT10CQ7L0Y3 403 aaKnown RBP13.47□□□□□ -0.25
TPR-201ENST00000367478 OLA1Q9NTK5 396 aaKnown RBP13.47□□□□□ -0.25
TPR-201ENST00000367478 NDE1Q9NXR1 346 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 NUP160Q12769 1436 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 MYL1P05976 194 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 EXOC3L4Q17RC7 722 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 SPATA1Q5VX52 437 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 SAAL1Q96ER3 474 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 SF3A3Q12874 501 aaKnown RBP eCLIP13.47□□□□□ -0.251e-6■■■■□ 23.6
TPR-201ENST00000367478 NEK8Q86SG6 692 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 SUPT20HQ8NEM7 779 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 GLG1Q92896 1179 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 FAM193BQ96PV7 902 aaPredicted RBP13.47□□□□□ -0.25
TPR-201ENST00000367478 JPH2Q9BR39 696 aaPredicted RBP13.47□□□□□ -0.25
TPR-201ENST00000367478 SLC8A2Q9UPR5 921 aa13.47□□□□□ -0.25
TPR-201ENST00000367478 ADGRL1O94910 1474 aa13.46□□□□□ -0.25
TPR-201ENST00000367478 TBCCQ15814 346 aa13.46□□□□□ -0.25
TPR-201ENST00000367478 PCGF5Q86SE9 256 aa13.46□□□□□ -0.25
TPR-201ENST00000367478 DCLK2Q8N568 766 aa13.46□□□□□ -0.25
TPR-201ENST00000367478 PA2G4Q9UQ80 394 aaKnown RBP13.46□□□□□ -0.25
TPR-201ENST00000367478 KAZNQ674X7 775 aa13.46□□□□□ -0.25
TPR-201ENST00000367478 PATL1Q86TB9 770 aaKnown RBP13.46□□□□□ -0.25
TPR-201ENST00000367478 SESTD1Q86VW0 696 aa13.46□□□□□ -0.25
TPR-201ENST00000367478 ARPP21Q9UBL0 812 aaPredicted RBP13.46□□□□□ -0.25
TPR-201ENST00000367478 OCRLQ01968 901 aa13.46□□□□□ -0.25
TPR-201ENST00000367478 METTL13Q8N6R0 699 aa13.46□□□□□ -0.25
TPR-201ENST00000367478 ZNF274Q96GC6 653 aaPredicted RBP13.46□□□□□ -0.25
TPR-201ENST00000367478 DCAF5Q96JK2 942 aa13.46□□□□□ -0.25
TPR-201ENST00000367478 ATP8B3O60423 1300 aa13.46□□□□□ -0.25
TPR-201ENST00000367478 ACEP12821 1306 aa13.46□□□□□ -0.25
TPR-201ENST00000367478 MT-ND3P03897 115 aa13.46□□□□□ -0.25
TPR-201ENST00000367478 TAC1P20366 129 aa13.46□□□□□ -0.25
TPR-201ENST00000367478 JARID2Q92833 1246 aaPredicted RBP13.46□□□□□ -0.25
TPR-201ENST00000367478 FMO2Q99518 471 aa13.46□□□□□ -0.25
TPR-201ENST00000367478 DPH5Q9H2P9 285 aa13.46□□□□□ -0.25
TPR-201ENST00000367478 MED21Q13503 144 aa13.46□□□□□ -0.25
TPR-201ENST00000367478 DSCC1Q9BVC3 393 aa13.46□□□□□ -0.25
TPR-201ENST00000367478 FAM95CA0A1B0GW59 222 aa13.46□□□□□ -0.26
TPR-201ENST00000367478 TLR3O15455 904 aaKnown RBP13.46□□□□□ -0.26
TPR-201ENST00000367478 GTPBP6O43824 516 aaPredicted RBP13.46□□□□□ -0.26
TPR-201ENST00000367478 KBTBD3Q8NAB2 608 aa13.46□□□□□ -0.26
TPR-201ENST00000367478 SAP30BPQ9UHR5 308 aaKnown RBP13.46□□□□□ -0.26
TPR-201ENST00000367478 POLR3AO14802 1390 aaPredicted RBP13.46□□□□□ -0.26
TPR-201ENST00000367478 FRMD3A2A2Y4 597 aa13.46□□□□□ -0.26
TPR-201ENST00000367478 SGO2Q562F6 1265 aa13.46□□□□□ -0.26
TPR-201ENST00000367478 DNAAF3Q8N9W5 541 aa13.46□□□□□ -0.26
TPR-201ENST00000367478 TRPC5Q9UL62 973 aaPredicted RBP13.46□□□□□ -0.26
TPR-201ENST00000367478 ECEL1O95672 775 aa13.45□□□□□ -0.26
TPR-201ENST00000367478 NELFCDQ8IXH7 590 aa13.45□□□□□ -0.26
TPR-201ENST00000367478 HOXB7P09629 217 aa13.45□□□□□ -0.26
TPR-201ENST00000367478 GRM1Q13255 1194 aa13.45□□□□□ -0.26
TPR-201ENST00000367478 FAM102BQ5T8I3 360 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms