RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 MIS18AQ9NYP9 233 aa9.44□□□□□ -0.9
SYNE1-206ENST00000367253 PKD2L1Q9P0L9 805 aa9.44□□□□□ -0.9
SYNE1-206ENST00000367253 ZNF18P17022 549 aa9.44□□□□□ -0.9
SYNE1-206ENST00000367253 KRT83P78385 493 aa9.44□□□□□ -0.9
SYNE1-206ENST00000367253 ANO6Q4KMQ2 910 aa9.44□□□□□ -0.9
SYNE1-206ENST00000367253 CCDC170Q8IYT3 715 aa9.44□□□□□ -0.9
SYNE1-206ENST00000367253 RYBPQ8N488 228 aaPredicted RBP9.44□□□□□ -0.9
SYNE1-206ENST00000367253 RNF10Q8N5U6 811 aaKnown RBP9.44□□□□□ -0.9
SYNE1-206ENST00000367253 MCUR1Q96AQ8 359 aa9.44□□□□□ -0.9
SYNE1-206ENST00000367253 CABS1Q96KC9 395 aa9.44□□□□□ -0.9
SYNE1-206ENST00000367253 NUDT12Q9BQG2 462 aa9.44□□□□□ -0.9
SYNE1-206ENST00000367253 GDPD2Q9HCC8 539 aa9.44□□□□□ -0.9
SYNE1-206ENST00000367253 GIMAP4Q9NUV9 329 aa9.44□□□□□ -0.9
SYNE1-206ENST00000367253 BABAM1Q9NWV8 329 aa9.44□□□□□ -0.9
SYNE1-206ENST00000367253 CAPN11Q9UMQ6 739 aa9.44□□□□□ -0.9
SYNE1-206ENST00000367253 NEURL4Q96JN8 1562 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 MANSC4A6NHS7 340 aaPredicted RBP9.43□□□□□ -0.9
SYNE1-206ENST00000367253 ZBTB43O43298 467 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 EVI5O60447 810 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 KRT75O95678 551 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 POLR2MP0CAP2 368 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 EVCP57679 992 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 NOGQ13253 232 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 BFSP2Q13515 415 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 CFAP157Q5JU67 520 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 CCDC102BQ68D86 513 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 ISM2Q6H9L7 571 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 SRGAP1Q7Z6B7 1085 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 OPTNQ96CV9 577 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 GPCPD1Q9NPB8 672 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 HMG20BQ9P0W2 317 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 PARP2Q9UGN5 583 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 SYNMO15061 1565 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 APLP1P51693 650 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 INHBEP58166 350 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 PPP2R3AQ06190 1150 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 VPS72Q15906 364 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 NAIF1Q69YI7 327 aaPredicted RBP9.43□□□□□ -0.9
SYNE1-206ENST00000367253 ADAT2Q7Z6V5 191 aaKnown RBP9.43□□□□□ -0.9
SYNE1-206ENST00000367253 APLFQ8IW19 511 aaPredicted RBP9.43□□□□□ -0.9
SYNE1-206ENST00000367253 SAP30BPQ9UHR5 308 aaKnown RBP9.43□□□□□ -0.9
SYNE1-206ENST00000367253 RRP15Q9Y3B9 282 aaKnown RBP9.43□□□□□ -0.9
SYNE1-206ENST00000367253 CAPN7Q9Y6W3 813 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 ERBB4Q15303 1308 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 A0A1W2PP64 1363 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 ATP5DP30049 168 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 ICA1Q05084 483 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 CALCOCO2Q13137 446 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 NAA30Q147X3 362 aaPredicted RBP9.43□□□□□ -0.9
SYNE1-206ENST00000367253 MGARPQ8TDB4 240 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 LPIN2Q92539 896 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.43□□□□□ -0.9
SYNE1-206ENST00000367253 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.43□□□□□ -0.9
SYNE1-206ENST00000367253 AKT3Q9Y243 479 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 PCDHA1Q9Y5I3 950 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 MAP3K5Q99683 1374 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 RPS6KA4O75676 772 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 Q3C1V9 767 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 EFCAB13Q8IY85 973 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 LMBR1Q8WVP7 490 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 COA1Q9GZY4 146 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 PLCB1Q9NQ66 1216 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 REREQ9P2R6 1566 aa9.43□□□□□ -0.9
SYNE1-206ENST00000367253 NEMP1O14524 444 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 MOCS3O95396 460 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 INSRP06213 1382 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 RPS12P25398 132 aaKnown RBP9.42□□□□□ -0.9
SYNE1-206ENST00000367253 RAD51Q06609 339 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 ARHGAP15Q53QZ3 475 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 MMS22LQ6ZRQ5 1243 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 ARHGEF2Q92974 986 aaKnown RBP9.42□□□□□ -0.9
SYNE1-206ENST00000367253 EFHD2Q96C19 240 aaPredicted RBP9.42□□□□□ -0.9
SYNE1-206ENST00000367253 TXNDC9O14530 226 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 NCAM2O15394 837 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 TRAPPC3O43617 180 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 SYT1P21579 422 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 GTF2A2P52657 109 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 TNNC1P63316 161 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 RASGRF1Q13972 1273 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 FYB2Q5VWT5 728 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 VSIG1Q86XK7 387 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 IQCDQ96DY2 449 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 TFIP11Q9UBB9 837 aaKnown RBP9.42□□□□□ -0.9
SYNE1-206ENST00000367253 EDC4Q6P2E9 1401 aaKnown RBP9.42□□□□□ -0.9
SYNE1-206ENST00000367253 CRCPO75575 148 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 IL6STP40189 918 aaPredicted RBP9.42□□□□□ -0.9
SYNE1-206ENST00000367253 ALDH1L2Q3SY69 923 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 GIMAP6Q6P9H5 292 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 FAM160B2Q86V87 743 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 EFHBQ8N7U6 833 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 FAM81BQ96LP2 452 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 TRPM1Q7Z4N2 1603 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 SLC26A4O43511 780 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 KRT19P08727 400 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 FCER1AP12319 257 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 ITGA6P23229 1130 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 LONP1P36776 959 aaKnown RBP9.42□□□□□ -0.9
SYNE1-206ENST00000367253 ARPP19P56211 112 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 TOMM20Q15388 145 aa9.42□□□□□ -0.9
SYNE1-206ENST00000367253 KBTBD12Q3ZCT8 623 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms