RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 FANCCQ00597 558 aa10.17□□□□□ -0.78
H3F3A-201ENST00000366813 IKZF1Q13422 519 aa10.17□□□□□ -0.78
H3F3A-201ENST00000366813 INPP5AQ14642 412 aa10.17□□□□□ -0.78
H3F3A-201ENST00000366813 SLC23A3Q6PIS1 610 aa10.17□□□□□ -0.78
H3F3A-201ENST00000366813 ARMCX6Q7L4S7 300 aa10.17□□□□□ -0.78
H3F3A-201ENST00000366813 NME9Q86XW9 330 aa10.17□□□□□ -0.78
H3F3A-201ENST00000366813 LRRN4CLQ8ND94 238 aa10.17□□□□□ -0.78
H3F3A-201ENST00000366813 FAM168AQ92567 244 aa10.17□□□□□ -0.78
H3F3A-201ENST00000366813 PRDM5Q9NQX1 630 aaPredicted RBP10.17□□□□□ -0.78
H3F3A-201ENST00000366813 LRIG2O94898 1065 aa10.16□□□□□ -0.78
H3F3A-201ENST00000366813 C8AP07357 584 aa10.16□□□□□ -0.78
H3F3A-201ENST00000366813 PIGBQ92521 554 aa10.16□□□□□ -0.78
H3F3A-201ENST00000366813 CENPJQ9HC77 1338 aaPredicted RBP10.16□□□□□ -0.78
H3F3A-201ENST00000366813 LRFN4Q6PJG9 635 aa10.15□□□□□ -0.78
H3F3A-201ENST00000366813 IP6K1Q92551 441 aa10.15□□□□□ -0.78
H3F3A-201ENST00000366813 NOC4LQ9BVI4 516 aaKnown RBP10.15□□□□□ -0.78
H3F3A-201ENST00000366813 FOXQ1Q9C009 403 aa10.15□□□□□ -0.78
H3F3A-201ENST00000366813 TPX2Q9ULW0 747 aaKnown RBP10.15□□□□□ -0.78
H3F3A-201ENST00000366813 C4AP0C0L4 1744 aa10.15□□□□□ -0.78
H3F3A-201ENST00000366813 DDNO94850 711 aaPredicted RBP10.14□□□□□ -0.79
H3F3A-201ENST00000366813 EOMESO95936 686 aa10.14□□□□□ -0.79
H3F3A-201ENST00000366813 ZNF76P36508 570 aa10.14□□□□□ -0.79
H3F3A-201ENST00000366813 ETF1P62495 437 aaKnown RBP10.14□□□□□ -0.79
H3F3A-201ENST00000366813 ZP2Q05996 745 aa10.14□□□□□ -0.79
H3F3A-201ENST00000366813 GRM1Q13255 1194 aa10.14□□□□□ -0.79
H3F3A-201ENST00000366813 CCDC85BQ15834 202 aaPredicted RBP10.14□□□□□ -0.79
H3F3A-201ENST00000366813 TTBK2Q6IQ55 1244 aa10.14□□□□□ -0.79
H3F3A-201ENST00000366813 SPACA3Q8IXA5 215 aa10.14□□□□□ -0.79
H3F3A-201ENST00000366813 PLPPR2Q96GM1 343 aa10.14□□□□□ -0.79
H3F3A-201ENST00000366813 PRDM7Q9NQW5 492 aa10.14□□□□□ -0.79
H3F3A-201ENST00000366813 SNCAIPQ9Y6H5 919 aa10.14□□□□□ -0.79
H3F3A-201ENST00000366813 LTN1O94822 1766 aa10.14□□□□□ -0.79
H3F3A-201ENST00000366813 KTN1Q86UP2 1357 aaKnown RBP10.14□□□□□ -0.79
H3F3A-201ENST00000366813 FAM155AB1AL88 458 aaPredicted RBP10.13□□□□□ -0.79
H3F3A-201ENST00000366813 HDLBPQ00341 1268 aaKnown RBP10.13□□□□□ -0.79
H3F3A-201ENST00000366813 PTPN11Q06124 597 aaPredicted RBP10.13□□□□□ -0.79
H3F3A-201ENST00000366813 NKPD1Q17RQ9 610 aa10.13□□□□□ -0.79
H3F3A-201ENST00000366813 LDHDQ86WU2 507 aa10.13□□□□□ -0.79
H3F3A-201ENST00000366813 USHBP1Q8N6Y0 703 aa10.13□□□□□ -0.79
H3F3A-201ENST00000366813 RNF34Q969K3 372 aa10.13□□□□□ -0.79
H3F3A-201ENST00000366813 ABT1Q9ULW3 272 aaKnown RBP10.13□□□□□ -0.79
H3F3A-201ENST00000366813 RFC4P35249 363 aa10.12□□□□□ -0.79
H3F3A-201ENST00000366813 DDR1Q08345 913 aa10.12□□□□□ -0.79
H3F3A-201ENST00000366813 CYFIP1Q7L576 1253 aa10.12□□□□□ -0.79
H3F3A-201ENST00000366813 METTL16Q86W50 562 aaKnown RBP10.12□□□□□ -0.79
H3F3A-201ENST00000366813 TMEM40Q8WWA1 233 aa10.12□□□□□ -0.79
H3F3A-201ENST00000366813 WNT10AQ9GZT5 417 aa10.12□□□□□ -0.79
H3F3A-201ENST00000366813 MAPK8IP1Q9UQF2 711 aa10.12□□□□□ -0.79
H3F3A-201ENST00000366813 CYP27B1O15528 508 aa10.11□□□□□ -0.79
H3F3A-201ENST00000366813 CLCN7P51798 805 aa10.11□□□□□ -0.79
H3F3A-201ENST00000366813 HABP4Q5JVS0 413 aaKnown RBP10.11□□□□□ -0.79
H3F3A-201ENST00000366813 ZNF648Q5T619 568 aaPredicted RBP10.11□□□□□ -0.79
H3F3A-201ENST00000366813 NBPF6Q5VWK0 638 aa10.11□□□□□ -0.79
H3F3A-201ENST00000366813 HID1Q8IV36 788 aa10.11□□□□□ -0.79
H3F3A-201ENST00000366813 MFSD2AQ8NA29 543 aa10.11□□□□□ -0.79
H3F3A-201ENST00000366813 CAPNS2Q96L46 248 aa10.11□□□□□ -0.79
H3F3A-201ENST00000366813 NBPF4Q96M43 638 aa10.11□□□□□ -0.79
H3F3A-201ENST00000366813 GPR101Q96P66 508 aaPredicted RBP10.11□□□□□ -0.79
H3F3A-201ENST00000366813 MIPEPQ99797 713 aa10.11□□□□□ -0.79
H3F3A-201ENST00000366813 ASAP1Q9ULH1 1129 aa10.11□□□□□ -0.79
H3F3A-201ENST00000366813 CASP8AP2Q9UKL3 1982 aa10.11□□□□□ -0.79
H3F3A-201ENST00000366813 FAM208AQ9UK61 1670 aaKnown RBP10.11□□□□□ -0.79
H3F3A-201ENST00000366813 TIAM2Q8IVF5 1701 aa10.11□□□□□ -0.79
H3F3A-201ENST00000366813 FARP2O94887 1054 aaPredicted RBP10.1□□□□□ -0.79
H3F3A-201ENST00000366813 SLITRK5O94991 958 aa10.1□□□□□ -0.79
H3F3A-201ENST00000366813 WIPI1Q5MNZ9 446 aaPredicted RBP10.1□□□□□ -0.79
H3F3A-201ENST00000366813 SFRP5Q5T4F7 317 aa10.1□□□□□ -0.79
H3F3A-201ENST00000366813 CYP4F22Q6NT55 531 aa10.1□□□□□ -0.79
H3F3A-201ENST00000366813 HS2ST1Q7LGA3 356 aa10.1□□□□□ -0.79
H3F3A-201ENST00000366813 RAPGEF4Q8WZA2 1011 aa10.1□□□□□ -0.79
H3F3A-201ENST00000366813 TAF1DQ9H5J8 278 aaPredicted RBP10.1□□□□□ -0.79
H3F3A-201ENST00000366813 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.1□□□□□ -0.79
H3F3A-201ENST00000366813 MAP2P11137 1827 aaKnown RBP10.1□□□□□ -0.79
H3F3A-201ENST00000366813 CCDC88AQ3V6T2 1871 aa10.1□□□□□ -0.79
H3F3A-201ENST00000366813 FBLN1P23142 703 aa10.09□□□□□ -0.79
H3F3A-201ENST00000366813 SLBPQ14493 270 aaKnown RBP eCLIP10.09□□□□□ -0.79
H3F3A-201ENST00000366813 CDKAL1Q5VV42 579 aa10.09□□□□□ -0.79
H3F3A-201ENST00000366813 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.09□□□□□ -0.79
H3F3A-201ENST00000366813 ERMP1Q7Z2K6 904 aa10.09□□□□□ -0.79
H3F3A-201ENST00000366813 FBRSQ9HAH7 460 aa10.09□□□□□ -0.79
H3F3A-201ENST00000366813 SRP68Q9UHB9 627 aaKnown RBP10.09□□□□□ -0.79
H3F3A-201ENST00000366813 GGT7Q9UJ14 662 aa10.09□□□□□ -0.79
H3F3A-201ENST00000366813 EVC2Q86UK5 1308 aa10.09□□□□□ -0.79
H3F3A-201ENST00000366813 PCDH11XQ9BZA7 1347 aa10.09□□□□□ -0.79
H3F3A-201ENST00000366813 PCDH11YQ9BZA8 1340 aa10.09□□□□□ -0.79
H3F3A-201ENST00000366813 RGPD2P0DJD1 1756 aa10.08□□□□□ -0.8
H3F3A-201ENST00000366813 HOXC9P31274 260 aa10.08□□□□□ -0.8
H3F3A-201ENST00000366813 CNTROBQ8N137 903 aa10.08□□□□□ -0.8
H3F3A-201ENST00000366813 GCC1Q96CN9 775 aa10.08□□□□□ -0.8
H3F3A-201ENST00000366813 HSPA12BQ96MM6 686 aa10.08□□□□□ -0.8
H3F3A-201ENST00000366813 RSRP1Q9BUV0 290 aa10.08□□□□□ -0.8
H3F3A-201ENST00000366813 CGNL1Q0VF96 1302 aa10.08□□□□□ -0.8
H3F3A-201ENST00000366813 RLBP1P12271 317 aa10.07□□□□□ -0.8
H3F3A-201ENST00000366813 PKN1Q16512 942 aa10.07□□□□□ -0.8
H3F3A-201ENST00000366813 NT5DC4Q86YG4 428 aa10.07□□□□□ -0.8
H3F3A-201ENST00000366813 TTLL6Q8N841 843 aa10.07□□□□□ -0.8
H3F3A-201ENST00000366813 LMCD1Q9NZU5 365 aa10.07□□□□□ -0.8
H3F3A-201ENST00000366813 PITPNM2Q9BZ72 1349 aa10.07□□□□□ -0.8
H3F3A-201ENST00000366813 IQCA1LA6NCM1 817 aa10.07□□□□□ -0.8
H3F3A-201ENST00000366813 POLRMTO00411 1230 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms