RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 RBL2Q08999 1139 aa12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 ANKRD20A4Q4UJ75 823 aa12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 ANKRD20A8PQ5CZ79 823 aa12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 ANKRD20A2Q5SQ80 823 aa12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 ANKRD20A1Q5TYW2 823 aa12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 RCSD1Q6JBY9 416 aa12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 TEX9Q8N6V9 391 aa12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 HDAC11Q96DB2 347 aa12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 TBK1Q9UHD2 729 aa12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 TOP2BQ02880 1626 aa12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 MAGEB6P1A0A0J9YX57 407 aa12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 LRRIQ3A6PVS8 624 aaPredicted RBP12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 SMAPO00193 183 aa12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 MCF2P10911 925 aa12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 MYCLP12524 364 aaPredicted RBP12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 RPL13P26373 211 aaKnown RBP12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 KRT80Q6KB66 452 aa12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 RHPN1Q8TCX5 695 aa12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 ACSBG1Q96GR2 724 aa12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 NT5C3AQ9H0P0 336 aa12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 TBC1D7Q9P0N9 293 aa12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 KDRP35968 1356 aa12.02□□□□□ -0.49
CDC42BPA-205ENST00000366769 TRMT10CQ7L0Y3 403 aaKnown RBP12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 TTC6Q86TZ1 520 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 GFM2Q969S9 779 aaKnown RBP12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 GJA8P48165 433 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 NOD2Q9HC29 1040 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 SAP30BPQ9UHR5 308 aaKnown RBP12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 ATP1A3P13637 1013 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 CSGALNACT2Q8N6G5 542 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 FAM133AQ8N9E0 248 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 PPWD1Q96BP3 646 aaKnown RBP12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 MOCS3O95396 460 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 TMTC3Q6ZXV5 915 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 CNGB3Q9NQW8 809 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 A0A0G2JND7 137 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 TAB3Q8N5C8 712 aaPredicted RBP12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 ATP6V0A4Q9HBG4 840 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 DDX39AO00148 427 aaKnown RBP12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 EXOC5O00471 708 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 ANXA1P04083 346 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 CCDC51Q96ER9 411 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 ACSL3O95573 720 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 MAGEA1P43355 309 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 TRPC1P48995 793 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 EIF2B2P49770 351 aaKnown RBP12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 KRT81Q14533 505 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 FBXO2Q9UK22 296 aaPredicted RBP12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 CAPN1P07384 714 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 CCT8L2Q96SF2 557 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 ADGBQ8N7X0 1667 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 CD19P15391 556 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 PDE6AP16499 860 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 MMEL1Q495T6 779 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 CLMNQ96JQ2 1002 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.01□□□□□ -0.491e-7■□□□□ 10.9
CDC42BPA-205ENST00000366769 CNNM2Q9H8M5 875 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 IFT122Q9HBG6 1241 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 PICK1Q9NRD5 415 aa12.01□□□□□ -0.49
CDC42BPA-205ENST00000366769 PDE5AO76074 875 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 RASSF7Q02833 373 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 STRN3Q13033 797 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 NLRP7Q8WX94 980 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 PPP1R14BQ96C90 147 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 IQCDQ96DY2 449 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 SH3GL1Q99961 368 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 ANGPTL3Q9Y5C1 460 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 LMNAP02545 664 aaKnown RBP12□□□□□ -0.49
CDC42BPA-205ENST00000366769 PHBP35232 272 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 DRP2Q13474 957 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 ANKRD13CQ8N6S4 541 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 CUTAO60888 179 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 ZCWPW1Q9H0M4 648 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 ETNK1Q9HBU6 452 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 IFRD2Q12894 506 aaPredicted RBP12□□□□□ -0.49
CDC42BPA-205ENST00000366769 LGSNQ5TDP6 509 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 RNF169Q8NCN4 708 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 MYO1AQ9UBC5 1043 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 PCDHA7Q9UN72 937 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 PAPOLAP51003 745 aaKnown RBP12□□□□□ -0.49
CDC42BPA-205ENST00000366769 CROCCP2Q86T23 111 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 MAGEB6Q8N7X4 407 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 DNAJC9Q8WXX5 260 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 PAPOLBQ9NRJ5 636 aaKnown RBP12□□□□□ -0.49
CDC42BPA-205ENST00000366769 MCM9Q9NXL9 1143 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 CARD10Q9BWT7 1032 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 CFAP73A6NFT4 308 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 TMEM232C9JQI7 657 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 WBP4O75554 376 aaKnown RBP12□□□□□ -0.49
CDC42BPA-205ENST00000366769 PLA2G4AP47712 749 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 LRRC31Q6UY01 552 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 STAMQ92783 540 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 PHF20L1A8MW92 1017 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 TRIM50Q86XT4 487 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 SUGCTQ9HAC7 445 aa12□□□□□ -0.49
CDC42BPA-205ENST00000366769 ARID1BQ8NFD5 2236 aaPredicted RBP11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 ADCY8P40145 1251 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 BLVRAP53004 296 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 SF3B3Q15393 1217 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 BEGAINQ9BUH8 593 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms