RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 ATF7P17544 494 aaPredicted RBP13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 STX2P32856 288 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 ADAM9Q13443 819 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 PHLDB3Q6NSJ2 640 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 CCT6BQ92526 530 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 CPSF2Q9P2I0 782 aaKnown RBP13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 THRAP3Q9Y2W1 955 aaKnown RBP13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 ADCK5Q3MIX3 580 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 TSGA10IPQ3SY00 556 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 EMBQ6PCB8 327 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 NSMCE1Q8WV22 266 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 ATP6V0A1Q93050 837 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 KCNJ6P48051 423 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 SEPT6Q14141 434 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 DLGAP5Q15398 846 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 P2RX5Q93086 422 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 TEKT3Q9BXF9 490 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 BLZF1Q9H2G9 400 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 KCNK3O14649 394 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 FBXO11Q86XK2 927 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 RNF10Q8N5U6 811 aaKnown RBP13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 KANSL2Q9H9L4 492 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 PCDHA1Q9Y5I3 950 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 SDCCAG8Q86SQ7 713 aaPredicted RBP13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 TPH2Q8IWU9 490 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 TRIM42Q8IWZ5 723 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 C17orf53Q8N3J3 647 aaPredicted RBP13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 CNKSR1Q969H4 720 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 CFBP00751 764 aa13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 DYMQ7RTS9 669 aa13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 SPTLC3Q9NUV7 552 aa13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 ICA1Q05084 483 aa13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 PABPC4Q13310 644 aaKnown RBP eCLIP13.16□□□□□ -0.32e-8■□□□□ 11
CDC42BPA-203ENST00000366766 RSAD2Q8WXG1 361 aa13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 RAB20Q9NX57 234 aa13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 USP31Q70CQ4 1352 aa13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 TNNI1P19237 187 aa13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 LARGE2Q8N3Y3 721 aa13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 BRIP1Q9BX63 1249 aa13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 CERKLQ49MI3 558 aaPredicted RBP13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 LOC102724428A0A0B4J2F2 783 aa13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 HSPA1LP34931 641 aa13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 SIK1P57059 783 aa13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 IRX3P78415 501 aaPredicted RBP13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 NAA25Q14CX7 972 aa13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 PGRMC1O00264 195 aaKnown RBP13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 KRT12Q99456 494 aa13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 TMEM206Q9H813 350 aa13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 PRPF6O94906 941 aaKnown RBP13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 KLHL7Q8IXQ5 586 aa13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 ZFP91Q96JP5 570 aaPredicted RBP13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 DIS3Q9Y2L1 958 aaKnown RBP13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 CLIC4Q9Y696 253 aa13.16□□□□□ -0.3
CDC42BPA-203ENST00000366766 DAPK3O43293 454 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 TTLL7Q6ZT98 887 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 DEPTORQ8TB45 409 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 CSRNP1Q96S65 589 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 TBC1D8O95759 1140 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 TECP42680 631 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 BIN2Q9UBW5 565 aaPredicted RBP13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 RESP18Q5W5W9 173 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 DGKHQ86XP1 1220 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 USP40Q9NVE5 1235 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 NDUFB9Q9Y6M9 179 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 SART1O43290 800 aaKnown RBP13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 RESTQ13127 1097 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 PPP1R18Q6NYC8 613 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 U2AF1L4Q8WU68 220 aaKnown RBP13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 MYO3AQ8NEV4 1616 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 DPCR1Q3MIW9 517 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 PAXIP1Q6ZW49 1069 aaPredicted RBP13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 GBP7Q8N8V2 638 aaPredicted RBP13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 NLRC4Q9NPP4 1024 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 CRCPO75575 148 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 NSFP46459 744 aaKnown RBP13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 BCAMP50895 628 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 CDHR2Q9BYE9 1310 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 HIP1RO75146 1068 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 PRR16Q569H4 304 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 DESI2Q9BSY9 194 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 PFDN4Q9NQP4 134 aa13.15□□□□□ -0.3
CDC42BPA-203ENST00000366766 STAM2O75886 525 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 ALX1Q15699 326 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 UAP1Q16222 522 aaPredicted RBP13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 NLGN1Q8N2Q7 840 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 JAG2Q9Y219 1238 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 EFCAB13Q8IY85 973 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 FAN1Q9Y2M0 1017 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 CCDC160A6NGH7 325 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 SUN1O94901 812 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 PHKA1P46020 1223 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 LRMPQ12912 555 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 SLMAPQ14BN4 828 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 DPH6Q7L8W6 267 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 MAP7D3Q8IWC1 876 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 NACC1Q96RE7 527 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 Q9H521 79 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 GREM2Q9H772 168 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 PREX1Q8TCU6 1659 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 USH1GQ495M9 461 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms