RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 DNAJA2O60884 412 aa10.2□□□□□ -0.78
YBX3-204ENST00000366290 RNGTTO60942 597 aaKnown RBP10.2□□□□□ -0.78
YBX3-204ENST00000366290 C1QTNF8P60827 252 aa10.2□□□□□ -0.78
YBX3-204ENST00000366290 LRRFIP1Q32MZ4 808 aaKnown RBP10.2□□□□□ -0.78
YBX3-204ENST00000366290 CCDC184Q52MB2 194 aa10.2□□□□□ -0.78
YBX3-204ENST00000366290 CEP350Q5VT06 3117 aa10.2□□□□□ -0.78
YBX3-204ENST00000366290 COL23A1Q86Y22 540 aaPredicted RBP10.2□□□□□ -0.78
YBX3-204ENST00000366290 CKAP2LQ8IYA6 745 aa10.2□□□□□ -0.78
YBX3-204ENST00000366290 FAM169BQ8N8A8 192 aa10.2□□□□□ -0.78
YBX3-204ENST00000366290 FLAD1Q8NFF5 587 aa10.2□□□□□ -0.78
YBX3-204ENST00000366290 TMEM40Q8WWA1 233 aa10.2□□□□□ -0.78
YBX3-204ENST00000366290 ISL2Q96A47 359 aa10.2□□□□□ -0.78
YBX3-204ENST00000366290 FAM46AQ96IP4 442 aaKnown RBP10.2□□□□□ -0.78
YBX3-204ENST00000366290 GMIPQ9P107 970 aa10.2□□□□□ -0.78
YBX3-204ENST00000366290 PRKAG3Q9UGI9 489 aa10.2□□□□□ -0.78
YBX3-204ENST00000366290 KLHL3Q9UH77 587 aa10.2□□□□□ -0.78
YBX3-204ENST00000366290 MYH14Q7Z406 1995 aaKnown RBP10.19□□□□□ -0.78
YBX3-204ENST00000366290 SIPA1L3O60292 1781 aaPredicted RBP10.19□□□□□ -0.78
YBX3-204ENST00000366290 MEIS3P2A8K0S8 358 aa10.19□□□□□ -0.78
YBX3-204ENST00000366290 U2SURPO15042 1029 aaKnown RBP10.19□□□□□ -0.78
YBX3-204ENST00000366290 RNMTO43148 476 aaKnown RBP10.19□□□□□ -0.78
YBX3-204ENST00000366290 ANP32CO43423 234 aa10.19□□□□□ -0.78
YBX3-204ENST00000366290 YBX3P16989 372 aaKnown RBP eCLIP10.19□□□□□ -0.782e-6■□□□□ 11.2
YBX3-204ENST00000366290 ITPK1Q13572 414 aa10.19□□□□□ -0.78
YBX3-204ENST00000366290 UBE3DQ7Z6J8 389 aa10.19□□□□□ -0.78
YBX3-204ENST00000366290 HID1Q8IV36 788 aa10.19□□□□□ -0.78
YBX3-204ENST00000366290 LINC00116Q8NCU8 138 aa10.19□□□□□ -0.78
YBX3-204ENST00000366290 SLC52A2Q9HAB3 445 aa10.19□□□□□ -0.78
YBX3-204ENST00000366290 FBRSQ9HAH7 460 aa10.19□□□□□ -0.78
YBX3-204ENST00000366290 TJP2Q9UDY2 1190 aa10.19□□□□□ -0.78
YBX3-204ENST00000366290 NUDCQ9Y266 331 aa10.19□□□□□ -0.78
YBX3-204ENST00000366290 UBR2Q8IWV8 1755 aa10.19□□□□□ -0.78
YBX3-204ENST00000366290 CEMIPQ8WUJ3 1361 aa10.18□□□□□ -0.78
YBX3-204ENST00000366290 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.18□□□□□ -0.78
YBX3-204ENST00000366290 SLC22A31A6NKX4 558 aa10.18□□□□□ -0.78
YBX3-204ENST00000366290 SMAD7O15105 426 aaKnown RBP10.18□□□□□ -0.78
YBX3-204ENST00000366290 USP11P51784 963 aa10.18□□□□□ -0.78
YBX3-204ENST00000366290 GPR162Q16538 588 aa10.18□□□□□ -0.78
YBX3-204ENST00000366290 OVOS1Q6IE37 1185 aa10.18□□□□□ -0.78
YBX3-204ENST00000366290 ANKS3Q6ZW76 656 aa10.18□□□□□ -0.78
YBX3-204ENST00000366290 CDC37L1Q7L3B6 337 aa10.18□□□□□ -0.78
YBX3-204ENST00000366290 AMIGO3Q86WK7 504 aa10.18□□□□□ -0.78
YBX3-204ENST00000366290 SMYD4Q8IYR2 804 aaPredicted RBP10.18□□□□□ -0.78
YBX3-204ENST00000366290 KCT2Q8NC54 265 aa10.18□□□□□ -0.78
YBX3-204ENST00000366290 MEGF10Q96KG7 1140 aa10.18□□□□□ -0.78
YBX3-204ENST00000366290 PHACTR3Q96KR7 559 aa10.18□□□□□ -0.78
YBX3-204ENST00000366290 LGR6Q9HBX8 967 aa10.18□□□□□ -0.78
YBX3-204ENST00000366290 TJP1Q07157 1748 aa10.17□□□□□ -0.78
YBX3-204ENST00000366290 GNAT3A8MTJ3 354 aa10.17□□□□□ -0.78
YBX3-204ENST00000366290 RAB6AP20340 208 aa10.17□□□□□ -0.78
YBX3-204ENST00000366290 PRKAR2BP31323 418 aa10.17□□□□□ -0.78
YBX3-204ENST00000366290 NKG7Q16617 165 aa10.17□□□□□ -0.78
YBX3-204ENST00000366290 SOGA3Q5TF21 947 aa10.17□□□□□ -0.78
YBX3-204ENST00000366290 RUFY4Q6ZNE9 571 aa10.17□□□□□ -0.78
YBX3-204ENST00000366290 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.17□□□□□ -0.78
YBX3-204ENST00000366290 MCATQ8IVS2 390 aaKnown RBP10.17□□□□□ -0.78
YBX3-204ENST00000366290 MRPL41Q8IXM3 137 aaKnown RBP10.17□□□□□ -0.78
YBX3-204ENST00000366290 DZIP1LQ8IYY4 767 aaKnown RBP10.17□□□□□ -0.78
YBX3-204ENST00000366290 TMEM87BQ96K49 555 aa10.17□□□□□ -0.78
YBX3-204ENST00000366290 SSU72Q9NP77 194 aaKnown RBP10.17□□□□□ -0.78
YBX3-204ENST00000366290 CNTNAP4Q9C0A0 1308 aa10.16□□□□□ -0.78
YBX3-204ENST00000366290 CHURC1-FNTBB4DL54 471 aa10.16□□□□□ -0.78
YBX3-204ENST00000366290 U2AF1L5P0DN76 240 aaPredicted RBP10.16□□□□□ -0.78
YBX3-204ENST00000366290 POLD1P28340 1107 aa10.16□□□□□ -0.78
YBX3-204ENST00000366290 U2AF1Q01081 240 aaKnown RBP eCLIP10.16□□□□□ -0.78
YBX3-204ENST00000366290 UVSSAQ2YD98 709 aa10.16□□□□□ -0.78
YBX3-204ENST00000366290 TNNI3KQ59H18 835 aa10.16□□□□□ -0.78
YBX3-204ENST00000366290 CDPF1Q6NVV7 123 aa10.16□□□□□ -0.78
YBX3-204ENST00000366290 FAM13CQ8NE31 585 aa10.16□□□□□ -0.78
YBX3-204ENST00000366290 HNRNPLLQ8WVV9 542 aaKnown RBP10.16□□□□□ -0.78
YBX3-204ENST00000366290 ATG4CQ96DT6 458 aa10.16□□□□□ -0.78
YBX3-204ENST00000366290 ACSS3Q9H6R3 686 aa10.16□□□□□ -0.78
YBX3-204ENST00000366290 KCPQ6ZWJ8 1503 aa10.16□□□□□ -0.78
YBX3-204ENST00000366290 UPK3BL1B0FP48 263 aa10.15□□□□□ -0.78
YBX3-204ENST00000366290 UPK3BL2E5RIL1 263 aa10.15□□□□□ -0.78
YBX3-204ENST00000366290 H2AFB1P0C5Y9 115 aa10.15□□□□□ -0.78
YBX3-204ENST00000366290 H2AFB2P0C5Z0 115 aa10.15□□□□□ -0.78
YBX3-204ENST00000366290 SGO2Q562F6 1265 aa10.15□□□□□ -0.78
YBX3-204ENST00000366290 ARSHQ5FYA8 562 aa10.15□□□□□ -0.78
YBX3-204ENST00000366290 SLC6A19Q695T7 634 aa10.15□□□□□ -0.78
YBX3-204ENST00000366290 SMIM5Q71RC9 77 aa10.15□□□□□ -0.78
YBX3-204ENST00000366290 DPH6Q7L8W6 267 aa10.15□□□□□ -0.78
YBX3-204ENST00000366290 NLRC3Q7RTR2 1065 aa10.15□□□□□ -0.78
YBX3-204ENST00000366290 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.15□□□□□ -0.78
YBX3-204ENST00000366290 IL17REQ8NFR9 667 aa10.15□□□□□ -0.78
YBX3-204ENST00000366290 FBLIM1Q8WUP2 373 aa10.15□□□□□ -0.78
YBX3-204ENST00000366290 UTP4Q969X6 686 aaKnown RBP10.15□□□□□ -0.78
YBX3-204ENST00000366290 TP53INP1Q96A56 240 aa10.15□□□□□ -0.78
YBX3-204ENST00000366290 TM9SF2Q99805 663 aa10.15□□□□□ -0.78
YBX3-204ENST00000366290 LNPKQ9C0E8 428 aa10.15□□□□□ -0.78
YBX3-204ENST00000366290 CNNM2Q9H8M5 875 aa10.15□□□□□ -0.78
YBX3-204ENST00000366290 PCOLCE2Q9UKZ9 415 aa10.15□□□□□ -0.78
YBX3-204ENST00000366290 KLF4O43474 513 aa10.14□□□□□ -0.79
YBX3-204ENST00000366290 HTATSF1O43719 755 aaKnown RBP10.14□□□□□ -0.79
YBX3-204ENST00000366290 NME1P15531 152 aaKnown RBP10.14□□□□□ -0.79
YBX3-204ENST00000366290 CAP2P40123 477 aa10.14□□□□□ -0.79
YBX3-204ENST00000366290 YARSP54577 528 aaKnown RBP10.14□□□□□ -0.79
YBX3-204ENST00000366290 SLBPQ14493 270 aaKnown RBP eCLIP10.14□□□□□ -0.79
YBX3-204ENST00000366290 CDCP2Q5VXM1 449 aa10.14□□□□□ -0.79
YBX3-204ENST00000366290 ARMC10Q8N2F6 343 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms