RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 UBR7Q8N806 425 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 UBE2FQ969M7 185 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 MMP19Q99542 508 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 ORAI3Q9BRQ5 295 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 PHF20Q9BVI0 1012 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 ZSWIM5Q9P217 1185 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 TMEFF2Q9UIK5 374 aaPredicted RBP5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 MCM8Q9UJA3 840 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 TCFL5Q9UL49 500 aa5.23□□□□□ -1.57
RNU6-28P-201ENST00000362378 TRBV23OR9-2A0A075B6M9 112 aa5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 TMEM265A0A087WTH1 108 aa5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 H3BS24 57 aa5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 FGF10O15520 208 aaPredicted RBP5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 RASGRP1O95267 797 aa5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 EYA4O95677 639 aa5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 GSTM1P09488 218 aa5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 KCNA6P17658 529 aa5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 PMLP29590 882 aa5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 FLT3P36888 993 aa5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 PCBP1Q15365 356 aaKnown RBP eCLIP5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 DHCR24Q15392 516 aa5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 PLA2G4EQ3MJ16 856 aa5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 NETO1Q8TDF5 533 aa5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 DIO2Q92813 273 aa5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 FOXP3Q9BZS1 431 aa5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 IRF2BPLQ9H1B7 796 aa5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 CLEC1BQ9P126 229 aa5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 DUSP13Q9UII6 198 aa5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 ZNF281Q9Y2X9 895 aa5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 PCDHA9Q9Y5H5 950 aa5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 PITPNM2Q9BZ72 1349 aa5.22□□□□□ -1.57
RNU6-28P-201ENST00000362378 SSU72P8A0A1W2PR75 194 aa5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 ALG1L2C9J202 215 aa5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 ARVCFO00192 962 aa5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 JMJD7P0C870 316 aa5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 CPEP16870 476 aa5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 PAMP19021 973 aa5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 NEK4P51957 841 aa5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 GUCY1A3Q02108 690 aa5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 LCE1DQ5T752 114 aa5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 CDCA2Q69YH5 1023 aaPredicted RBP5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 ZCCHC8Q6NZY4 707 aaKnown RBP5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 PKN3Q6P5Z2 889 aa5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 LBX2Q6XYB7 198 aa5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 UBE2R2Q712K3 238 aaPredicted RBP5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 STRA8Q7Z7C7 330 aa5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 KIF18BQ86Y91 864 aa5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 ZDHHC13Q8IUH4 622 aa5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 PLD6Q8N2A8 252 aaKnown RBP5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 RCBTB1Q8NDN9 531 aa5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 LEO1Q8WVC0 666 aaPredicted RBP5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 PTCHD1Q96NR3 888 aa5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 LRRC4CQ9HCJ2 640 aa5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 HOMER2Q9NSB8 354 aa5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 PIM2Q9P1W9 311 aa5.21□□□□□ -1.58
RNU6-28P-201ENST00000362378 NPHP3-ACAD11A0A0J9YXS1 232 aa5.2□□□□□ -1.58
RNU6-28P-201ENST00000362378 TMEM82A0PJX8 343 aa5.2□□□□□ -1.58
RNU6-28P-201ENST00000362378 PRR19A6NJB7 356 aa5.2□□□□□ -1.58
RNU6-28P-201ENST00000362378 WNT9AO14904 365 aa5.2□□□□□ -1.58
RNU6-28P-201ENST00000362378 CYP26A1O43174 497 aa5.2□□□□□ -1.58
RNU6-28P-201ENST00000362378 MSCO60682 206 aa5.2□□□□□ -1.58
RNU6-28P-201ENST00000362378 ESR1P03372 595 aa5.2□□□□□ -1.58
RNU6-28P-201ENST00000362378 APPP05067 770 aa5.2□□□□□ -1.58
RNU6-28P-201ENST00000362378 LCP1P13796 627 aa5.2□□□□□ -1.58
RNU6-28P-201ENST00000362378 FOSL1P15407 271 aa5.2□□□□□ -1.58
RNU6-28P-201ENST00000362378 TEKQ02763 1124 aa5.2□□□□□ -1.58
RNU6-28P-201ENST00000362378 SEPT7Q16181 437 aaKnown RBP5.2□□□□□ -1.58
RNU6-28P-201ENST00000362378 CFAP100Q494V2 611 aa5.2□□□□□ -1.58
RNU6-28P-201ENST00000362378 NKAPLQ5M9Q1 402 aa5.2□□□□□ -1.58
RNU6-28P-201ENST00000362378 FERMT3Q86UX7 667 aa5.2□□□□□ -1.58
RNU6-28P-201ENST00000362378 AP5S1Q9NUS5 200 aa5.2□□□□□ -1.58
RNU6-28P-201ENST00000362378 KLHL42Q9P2K6 505 aa5.2□□□□□ -1.58
RNU6-28P-201ENST00000362378 ZC3H7BQ9UGR2 993 aaKnown RBP5.2□□□□□ -1.58
RNU6-28P-201ENST00000362378 PCDHA8Q9Y5H6 950 aa5.2□□□□□ -1.58
RNU6-28P-201ENST00000362378 PCDHA11Q9Y5I1 949 aa5.2□□□□□ -1.58
RNU6-28P-201ENST00000362378 KPNA6O60684 536 aa5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 FKTNO75072 461 aa5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 LTKP29376 864 aa5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 EVA1CP58658 441 aa5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 EXOSC10Q01780 885 aaKnown RBP5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 PAK1Q13153 545 aa5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 DOC2BQ14184 412 aa5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 INF2Q27J81 1249 aa5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 KIZQ2M2Z5 673 aa5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 MBLAC2Q68D91 279 aa5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 WWC2Q6AWC2 1192 aa5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 ABHD17CQ6PCB6 329 aa5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 CYP2R1Q6VVX0 501 aa5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 DDX53Q86TM3 631 aaKnown RBP5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 MTDHQ86UE4 582 aaKnown RBP5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 CREG2Q8IUH2 290 aa5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 ATL2Q8NHH9 583 aa5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 PCDH19Q8TAB3 1148 aa5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 WNK4Q96J92 1243 aa5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 ALG1Q9BT22 464 aa5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 CDADC1Q9BWV3 514 aa5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 ATP13A1Q9HD20 1204 aa5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 SAMD15Q9P1V8 674 aa5.19□□□□□ -1.58
RNU6-28P-201ENST00000362378 PHLDB1Q86UU1 1377 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms