RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 GINM1Q9NU53 330 aa15.7■□□□□ 0.1
CSNK1E-201ENST00000359867 M0R2N6 131 aa15.7■□□□□ 0.1
CSNK1E-201ENST00000359867 STXBP3O00186 592 aa15.7■□□□□ 0.1
CSNK1E-201ENST00000359867 YY1P25490 414 aa15.7■□□□□ 0.1
CSNK1E-201ENST00000359867 WWC2Q6AWC2 1192 aa15.7■□□□□ 0.1
CSNK1E-201ENST00000359867 KANK3Q6NY19 840 aa15.7■□□□□ 0.1
CSNK1E-201ENST00000359867 PIK3AP1Q6ZUJ8 805 aa15.7■□□□□ 0.1
CSNK1E-201ENST00000359867 ZNF592Q92610 1267 aa15.7■□□□□ 0.1
CSNK1E-201ENST00000359867 RRP36Q96EU6 259 aaKnown RBP15.7■□□□□ 0.1
CSNK1E-201ENST00000359867 GBA2Q9HCG7 927 aaPredicted RBP15.7■□□□□ 0.1
CSNK1E-201ENST00000359867 VAT1LQ9HCJ6 419 aa15.7■□□□□ 0.1
CSNK1E-201ENST00000359867 GOPCQ9HD26 462 aa15.7■□□□□ 0.1
CSNK1E-201ENST00000359867 BECN2A8MW95 431 aa15.69■□□□□ 0.1
CSNK1E-201ENST00000359867 USP17L10C9JJH3 530 aa15.69■□□□□ 0.1
CSNK1E-201ENST00000359867 hCG_1984214I3L0E3 225 aa15.69■□□□□ 0.1
CSNK1E-201ENST00000359867 ATP2C1P98194 919 aaPredicted RBP15.69■□□□□ 0.1
CSNK1E-201ENST00000359867 LONRF3Q496Y0 759 aa15.69■□□□□ 0.1
CSNK1E-201ENST00000359867 FAM83BQ5T0W9 1011 aa15.69■□□□□ 0.1
CSNK1E-201ENST00000359867 SARM1Q6SZW1 724 aa15.69■□□□□ 0.1
CSNK1E-201ENST00000359867 ZNF713Q8N859 430 aaPredicted RBP15.69■□□□□ 0.1
CSNK1E-201ENST00000359867 GPKOWQ92917 476 aaPredicted RBP eCLIP15.69■□□□□ 0.12e-6■■□□□ 13
CSNK1E-201ENST00000359867 CSRNP2Q9H175 543 aa15.69■□□□□ 0.1
CSNK1E-201ENST00000359867 RIOX1Q9H6W3 641 aa15.69■□□□□ 0.1
CSNK1E-201ENST00000359867 SH2D4AQ9H788 454 aa15.69■□□□□ 0.1
CSNK1E-201ENST00000359867 TNNT1P13805 278 aa15.69■□□□□ 0.1
CSNK1E-201ENST00000359867 HMGCS2P54868 508 aa15.69■□□□□ 0.1
CSNK1E-201ENST00000359867 IRX3P78415 501 aaPredicted RBP15.69■□□□□ 0.1
CSNK1E-201ENST00000359867 GRIN1Q05586 938 aa15.69■□□□□ 0.1
CSNK1E-201ENST00000359867 SAMD1Q6SPF0 538 aaPredicted RBP15.69■□□□□ 0.1
CSNK1E-201ENST00000359867 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.69■□□□□ 0.1
CSNK1E-201ENST00000359867 AS3MTQ9HBK9 375 aa15.69■□□□□ 0.1
CSNK1E-201ENST00000359867 BMP3P12645 472 aa15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 ZNF174Q15697 407 aa15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 LDLRAD1Q5T700 205 aa15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 HEATR3Q7Z4Q2 680 aa15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 HOMER1Q86YM7 354 aa15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 DHX40Q8IX18 779 aaKnown RBP15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 DHX37Q8IY37 1157 aaKnown RBP15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 DCAF4Q8WV16 495 aa15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 WDR18Q9BV38 432 aa15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 KIAA1683Q9H0B3 1180 aa15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 ZMYND12Q9H0C1 365 aa15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 EMILIN3Q9NT22 766 aa15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 SEC63Q9UGP8 760 aaKnown RBP15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 AFG3L2Q9Y4W6 797 aa15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 TMEM232C9JQI7 657 aa15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 IRF6O14896 467 aa15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 BACE1P56817 501 aa15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 IKQ13123 557 aaPredicted RBP15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 TPD52L1Q16890 204 aaPredicted RBP15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 NOM1Q5C9Z4 860 aaKnown RBP15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 ANKRD7Q92527 254 aa15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 ZBTB9Q96C00 473 aa15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 CCDC34Q96HJ3 373 aa15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 GMCL1Q96IK5 515 aa15.68■□□□□ 0.1
CSNK1E-201ENST00000359867 MDM2Q00987 491 aaPredicted RBP15.67■□□□□ 0.1
CSNK1E-201ENST00000359867 NCBP1Q09161 790 aaKnown RBP15.67■□□□□ 0.1
CSNK1E-201ENST00000359867 SPECC1Q5M775 1068 aa15.67■□□□□ 0.1
CSNK1E-201ENST00000359867 GPATCH4Q5T3I0 446 aaKnown RBP15.67■□□□□ 0.1
CSNK1E-201ENST00000359867 ARL6IP4Q66PJ3 421 aaKnown RBP15.67■□□□□ 0.1
CSNK1E-201ENST00000359867 TYW1BQ6NUM6 668 aa15.67■□□□□ 0.1
CSNK1E-201ENST00000359867 ZNF784Q8NCA9 323 aaPredicted RBP15.67■□□□□ 0.1
CSNK1E-201ENST00000359867 OPTNQ96CV9 577 aa15.67■□□□□ 0.1
CSNK1E-201ENST00000359867 CCDC194A0A1B0GVG4 234 aa15.67■□□□□ 0.1
CSNK1E-201ENST00000359867 USP27XA6NNY8 438 aa15.67■□□□□ 0.1
CSNK1E-201ENST00000359867 GNA11P29992 359 aa15.67■□□□□ 0.1
CSNK1E-201ENST00000359867 PTGDRQ13258 359 aa15.67■□□□□ 0.1
CSNK1E-201ENST00000359867 C2orf69Q8N8R5 385 aa15.67■□□□□ 0.1
CSNK1E-201ENST00000359867 FBXO28Q9NVF7 368 aa15.67■□□□□ 0.1
CSNK1E-201ENST00000359867 SYNPO2Q9UMS6 1093 aa15.67■□□□□ 0.1
CSNK1E-201ENST00000359867 PCDHA6Q9UN73 950 aa15.67■□□□□ 0.1
CSNK1E-201ENST00000359867 PCDHA8Q9Y5H6 950 aa15.67■□□□□ 0.1
CSNK1E-201ENST00000359867 TRPM7Q96QT4 1865 aa15.67■□□□□ 0.1
CSNK1E-201ENST00000359867 WNT7AO00755 349 aa15.66■□□□□ 0.1
CSNK1E-201ENST00000359867 POLR2DO15514 142 aaKnown RBP15.66■□□□□ 0.1
CSNK1E-201ENST00000359867 CTIFO43310 598 aaKnown RBP15.66■□□□□ 0.1
CSNK1E-201ENST00000359867 SNAP25P60880 206 aa15.66■□□□□ 0.1
CSNK1E-201ENST00000359867 MKRN3Q13064 507 aaKnown RBP15.66■□□□□ 0.1
CSNK1E-201ENST00000359867 DPCR1Q3MIW9 517 aa15.66■□□□□ 0.1
CSNK1E-201ENST00000359867 ERO1BQ86YB8 467 aa15.66■□□□□ 0.1
CSNK1E-201ENST00000359867 C6orf50Q9HD87 102 aa15.66■□□□□ 0.1
CSNK1E-201ENST00000359867 PTPRFP10586 1907 aa15.66■□□□□ 0.1
CSNK1E-201ENST00000359867 ESYT2A0FGR8 921 aa15.66■□□□□ 0.1
CSNK1E-201ENST00000359867 SPDYE5A6NIY4 337 aa15.66■□□□□ 0.1
CSNK1E-201ENST00000359867 SMTNL1A8MU46 457 aa15.66■□□□□ 0.1
CSNK1E-201ENST00000359867 VCAM1P19320 739 aa15.66■□□□□ 0.1
CSNK1E-201ENST00000359867 CDC25BP30305 580 aa15.66■□□□□ 0.1
CSNK1E-201ENST00000359867 ADGRF4Q8IZF3 695 aa15.66■□□□□ 0.1
CSNK1E-201ENST00000359867 PIGSQ96S52 555 aa15.66■□□□□ 0.1
CSNK1E-201ENST00000359867 PYM1Q9BRP8 204 aaKnown RBP15.66■□□□□ 0.1
CSNK1E-201ENST00000359867 GJA5P36382 358 aa15.65■□□□□ 0.1
CSNK1E-201ENST00000359867 NAPAP54920 295 aa15.65■□□□□ 0.1
CSNK1E-201ENST00000359867 PNOCQ13519 176 aa15.65■□□□□ 0.1
CSNK1E-201ENST00000359867 SLC10A4Q96EP9 437 aa15.65■□□□□ 0.1
CSNK1E-201ENST00000359867 SERTAD1Q9UHV2 236 aa15.65■□□□□ 0.1
CSNK1E-201ENST00000359867 ADAMTS3O15072 1205 aa15.65■□□□□ 0.1
CSNK1E-201ENST00000359867 PPATQ06203 517 aa15.65■□□□□ 0.1
CSNK1E-201ENST00000359867 POSTNQ15063 836 aa15.65■□□□□ 0.1
CSNK1E-201ENST00000359867 NT5DC1Q5TFE4 455 aa15.65■□□□□ 0.1
CSNK1E-201ENST00000359867 KRT25Q7Z3Z0 450 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms