RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 FXR1P51114 621 aaKnown RBP eCLIP13.56□□□□□ -0.24
COL20A1-201ENST00000358894 FAM76AQ8TAV0 307 aa13.56□□□□□ -0.24
COL20A1-201ENST00000358894 AFAP1L1Q8TED9 768 aa13.56□□□□□ -0.24
COL20A1-201ENST00000358894 CTNNBL1Q8WYA6 563 aaPredicted RBP13.56□□□□□ -0.24
COL20A1-201ENST00000358894 MRPL44Q9H9J2 332 aaKnown RBP13.56□□□□□ -0.24
COL20A1-201ENST00000358894 SERPINB13Q9UIV8 391 aa13.56□□□□□ -0.24
COL20A1-201ENST00000358894 TTC26A0AVF1 554 aa13.56□□□□□ -0.24
COL20A1-201ENST00000358894 CCDC151A5D8V7 595 aa13.56□□□□□ -0.24
COL20A1-201ENST00000358894 POTEMA6NI47 508 aa13.56□□□□□ -0.24
COL20A1-201ENST00000358894 USP17L5A8MUK1 530 aa13.56□□□□□ -0.24
COL20A1-201ENST00000358894 GCNT3O95395 438 aa13.56□□□□□ -0.24
COL20A1-201ENST00000358894 KRT13P13646 458 aa13.56□□□□□ -0.24
COL20A1-201ENST00000358894 CXCR5P32302 372 aa13.56□□□□□ -0.24
COL20A1-201ENST00000358894 CFAP58Q5T655 872 aa13.56□□□□□ -0.24
COL20A1-201ENST00000358894 MSL1Q68DK7 614 aa13.56□□□□□ -0.24
COL20A1-201ENST00000358894 CEP95Q96GE4 821 aa13.56□□□□□ -0.24
COL20A1-201ENST00000358894 DDX39AO00148 427 aaKnown RBP13.56□□□□□ -0.24
COL20A1-201ENST00000358894 EPB41P11171 864 aaKnown RBP13.56□□□□□ -0.24
COL20A1-201ENST00000358894 SF3B3Q15393 1217 aaKnown RBP13.56□□□□□ -0.24
COL20A1-201ENST00000358894 FBXL16Q8N461 479 aa13.56□□□□□ -0.24
COL20A1-201ENST00000358894 TRIM58Q8NG06 486 aa13.56□□□□□ -0.24
COL20A1-201ENST00000358894 SCLT1Q96NL6 688 aa13.56□□□□□ -0.24
COL20A1-201ENST00000358894 NT5C3AQ9H0P0 336 aa13.56□□□□□ -0.24
COL20A1-201ENST00000358894 TMEM260Q9NX78 707 aa13.56□□□□□ -0.24
COL20A1-201ENST00000358894 LTN1O94822 1766 aa13.55□□□□□ -0.24
COL20A1-201ENST00000358894 A0A1B0GTH6 734 aa13.55□□□□□ -0.24
COL20A1-201ENST00000358894 GOLGA6BA6NDN3 693 aa13.55□□□□□ -0.24
COL20A1-201ENST00000358894 MRPS25P82663 173 aaKnown RBP13.55□□□□□ -0.24
COL20A1-201ENST00000358894 SARNPP82979 210 aaKnown RBP13.55□□□□□ -0.24
COL20A1-201ENST00000358894 ICE2Q659A1 982 aa13.55□□□□□ -0.24
COL20A1-201ENST00000358894 CUEDC2Q9H467 287 aa13.55□□□□□ -0.24
COL20A1-201ENST00000358894 FAM208AQ9UK61 1670 aaKnown RBP13.55□□□□□ -0.24
COL20A1-201ENST00000358894 SRGAP2O75044 1071 aa13.55□□□□□ -0.24
COL20A1-201ENST00000358894 VGLL2Q8N8G2 317 aa13.55□□□□□ -0.24
COL20A1-201ENST00000358894 RDH13Q8NBN7 331 aa13.55□□□□□ -0.24
COL20A1-201ENST00000358894 HPS3Q969F9 1004 aa13.55□□□□□ -0.24
COL20A1-201ENST00000358894 TADA3O75528 432 aa13.55□□□□□ -0.24
COL20A1-201ENST00000358894 LIG3P49916 1009 aa13.55□□□□□ -0.24
COL20A1-201ENST00000358894 RASSF7Q02833 373 aa13.55□□□□□ -0.24
COL20A1-201ENST00000358894 SF3A3Q12874 501 aaKnown RBP eCLIP13.55□□□□□ -0.24
COL20A1-201ENST00000358894 DPYDQ12882 1025 aa13.55□□□□□ -0.24
COL20A1-201ENST00000358894 RAD9BQ6WBX8 426 aa13.55□□□□□ -0.24
COL20A1-201ENST00000358894 LINC00116Q8NCU8 138 aa13.55□□□□□ -0.24
COL20A1-201ENST00000358894 NAP1L4Q99733 375 aaKnown RBP13.55□□□□□ -0.24
COL20A1-201ENST00000358894 CD209Q9NNX6 404 aa13.55□□□□□ -0.24
COL20A1-201ENST00000358894 COL5A2P05997 1499 aaPredicted RBP13.54□□□□□ -0.24
COL20A1-201ENST00000358894 MYO1CO00159 1063 aa13.54□□□□□ -0.24
COL20A1-201ENST00000358894 CEP104O60308 925 aa13.54□□□□□ -0.24
COL20A1-201ENST00000358894 C12orf60Q5U649 245 aa13.54□□□□□ -0.24
COL20A1-201ENST00000358894 SPICE1Q8N0Z3 855 aa13.54□□□□□ -0.24
COL20A1-201ENST00000358894 ADD3Q9UEY8 706 aaKnown RBP13.54□□□□□ -0.24
COL20A1-201ENST00000358894 RRP15Q9Y3B9 282 aaKnown RBP13.54□□□□□ -0.24
COL20A1-201ENST00000358894 CNTNAP5Q8WYK1 1306 aa13.54□□□□□ -0.24
COL20A1-201ENST00000358894 GOLGA6CA6NDK9 693 aa13.54□□□□□ -0.24
COL20A1-201ENST00000358894 GOLGA6DP0CG33 693 aa13.54□□□□□ -0.24
COL20A1-201ENST00000358894 CACNB3P54284 484 aa13.54□□□□□ -0.24
COL20A1-201ENST00000358894 SP4Q02446 784 aa13.54□□□□□ -0.24
COL20A1-201ENST00000358894 PABPC4Q13310 644 aaKnown RBP eCLIP13.54□□□□□ -0.24
COL20A1-201ENST00000358894 NR1I3Q14994 352 aa13.54□□□□□ -0.24
COL20A1-201ENST00000358894 KIAA0753Q2KHM9 967 aa13.54□□□□□ -0.24
COL20A1-201ENST00000358894 EARS2Q5JPH6 523 aaKnown RBP13.54□□□□□ -0.24
COL20A1-201ENST00000358894 RBM26Q5T8P6 1007 aaKnown RBP13.54□□□□□ -0.24
COL20A1-201ENST00000358894 SLFN13Q68D06 897 aa13.54□□□□□ -0.24
COL20A1-201ENST00000358894 CHP1Q99653 195 aa13.54□□□□□ -0.24
COL20A1-201ENST00000358894 NHEJ1Q9H9Q4 299 aaPredicted RBP13.54□□□□□ -0.24
COL20A1-201ENST00000358894 GOLGA6AQ9NYA3 693 aa13.54□□□□□ -0.24
COL20A1-201ENST00000358894 LGALS16A8MUM7 142 aa13.54□□□□□ -0.24
COL20A1-201ENST00000358894 TNNC1P63316 161 aa13.54□□□□□ -0.24
COL20A1-201ENST00000358894 ZBED6P86452 979 aa13.54□□□□□ -0.24
COL20A1-201ENST00000358894 ADAM9Q13443 819 aa13.54□□□□□ -0.24
COL20A1-201ENST00000358894 CC2D1AQ6P1N0 951 aaPredicted RBP13.54□□□□□ -0.24
COL20A1-201ENST00000358894 TPH2Q8IWU9 490 aa13.54□□□□□ -0.24
COL20A1-201ENST00000358894 MYCT1Q8N699 235 aa13.54□□□□□ -0.24
COL20A1-201ENST00000358894 ABCB6Q9NP58 842 aa13.54□□□□□ -0.24
COL20A1-201ENST00000358894 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.54□□□□□ -0.24
COL20A1-201ENST00000358894 TTLL1O95922 423 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 CERKLQ49MI3 558 aaPredicted RBP13.53□□□□□ -0.24
COL20A1-201ENST00000358894 CCDC174Q6PII3 467 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 RIOK1Q9BRS2 568 aaKnown RBP13.53□□□□□ -0.24
COL20A1-201ENST00000358894 TRIM31Q9BZY9 425 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 THAP9Q9H5L6 903 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 DBNDD1Q9H9R9 158 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 MAGEF1Q9HAY2 307 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 FAM196BA6NMK8 535 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 FCER1AP12319 257 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 CD44P16070 742 aaKnown RBP13.53□□□□□ -0.24
COL20A1-201ENST00000358894 KCNJ6P48051 423 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 GRM4Q14833 912 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 NFIXQ14938 502 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 NAA25Q14CX7 972 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 ASPRV1Q53RT3 343 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 C3orf67Q6ZVT6 689 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 CLEC10AQ8IUN9 316 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 DYDC1Q8WWB3 177 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 BARHL2Q9NY43 387 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 MYO1AQ9UBC5 1043 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 MEIS1O00470 390 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 CCDC172P0C7W6 258 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 ICA1Q05084 483 aa13.53□□□□□ -0.24
COL20A1-201ENST00000358894 MICALCLQ6ZW33 695 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms