RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 NHSQ6T4R5 1651 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 CYLC1P35663 651 aaPredicted RBP9.6□□□□□ -0.87
RFX3-202ENST00000358730 GPSM2P81274 684 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 AMPD3Q01432 767 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 MEA1Q16626 185 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 CNNM4Q6P4Q7 775 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 HDXQ7Z353 690 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 TRAPPC11Q7Z392 1133 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 NEK11Q8NG66 645 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 HPS3Q969F9 1004 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 JAKMIP2Q96AA8 810 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 NOC4LQ9BVI4 516 aaKnown RBP9.6□□□□□ -0.87
RFX3-202ENST00000358730 DNAJC5Q9H3Z4 198 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 SUGCTQ9HAC7 445 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 CD209Q9NNX6 404 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 ABCB6Q9NP58 842 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 HDAC6Q9UBN7 1215 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 KRT86O43790 486 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 ATP1A1P05023 1023 aaKnown RBP9.6□□□□□ -0.87
RFX3-202ENST00000358730 PPP1R2P41236 205 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 GPS2Q13227 327 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 RETREG2Q8NC44 543 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 KIAA0895Q8NCT3 520 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 EHBP1Q8NDI1 1231 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 NGLY1Q96IV0 654 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 NUP58Q9BVL2 599 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 UBA5Q9GZZ9 404 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 PDE11AQ9HCR9 933 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 RNF216Q9NWF9 866 aaPredicted RBP9.6□□□□□ -0.87
RFX3-202ENST00000358730 TMEM260Q9NX78 707 aa9.6□□□□□ -0.87
RFX3-202ENST00000358730 FRMPD2Q68DX3 1309 aaPredicted RBP9.59□□□□□ -0.87
RFX3-202ENST00000358730 GPR75-ASB3A0A0A6YYF3 556 aa9.59□□□□□ -0.87
RFX3-202ENST00000358730 USP17L5A8MUK1 530 aa9.59□□□□□ -0.87
RFX3-202ENST00000358730 EIF3JO75822 258 aaKnown RBP9.59□□□□□ -0.87
RFX3-202ENST00000358730 PLCG2P16885 1265 aa9.59□□□□□ -0.87
RFX3-202ENST00000358730 TXKP42681 527 aa9.59□□□□□ -0.87
RFX3-202ENST00000358730 ZBED6P86452 979 aa9.59□□□□□ -0.87
RFX3-202ENST00000358730 VPS72Q15906 364 aa9.59□□□□□ -0.87
RFX3-202ENST00000358730 MFSD14BQ5SR56 506 aa9.59□□□□□ -0.87
RFX3-202ENST00000358730 TRAPPC3LQ5T215 181 aa9.59□□□□□ -0.87
RFX3-202ENST00000358730 ZBTB9Q96C00 473 aa9.59□□□□□ -0.87
RFX3-202ENST00000358730 MMTAG2Q9BU76 263 aaKnown RBP9.59□□□□□ -0.87
RFX3-202ENST00000358730 GBP3Q9H0R5 595 aa9.59□□□□□ -0.87
RFX3-202ENST00000358730 NHEJ1Q9H9Q4 299 aaPredicted RBP9.59□□□□□ -0.87
RFX3-202ENST00000358730 RASSF10A6NK89 507 aa9.59□□□□□ -0.87
RFX3-202ENST00000358730 GYS2P54840 703 aa9.59□□□□□ -0.87
RFX3-202ENST00000358730 CALCRLQ16602 461 aa9.59□□□□□ -0.87
RFX3-202ENST00000358730 MIIPQ5JXC2 388 aa9.59□□□□□ -0.87
RFX3-202ENST00000358730 FKBP15Q5T1M5 1219 aa9.59□□□□□ -0.87
RFX3-202ENST00000358730 C15orf52Q6ZUT6 534 aaKnown RBP9.59□□□□□ -0.87
RFX3-202ENST00000358730 CDK5RAP3Q96JB5 506 aa9.59□□□□□ -0.87
RFX3-202ENST00000358730 SLC39A2Q9NP94 309 aa9.59□□□□□ -0.87
RFX3-202ENST00000358730 L1RE1Q9UN81 338 aa9.59□□□□□ -0.87
RFX3-202ENST00000358730 SAR1BQ9Y6B6 198 aa9.59□□□□□ -0.87
RFX3-202ENST00000358730 SRGAP2O75044 1071 aa9.58□□□□□ -0.88
RFX3-202ENST00000358730 SV2BQ7L1I2 683 aa9.58□□□□□ -0.88
RFX3-202ENST00000358730 TXLNBQ8N3L3 684 aa9.58□□□□□ -0.88
RFX3-202ENST00000358730 CAPZA3Q96KX2 299 aa9.58□□□□□ -0.88
RFX3-202ENST00000358730 CALCOCO1Q9P1Z2 691 aa9.58□□□□□ -0.88
RFX3-202ENST00000358730 GGA1Q9UJY5 639 aa9.58□□□□□ -0.88
RFX3-202ENST00000358730 LY75O60449 1722 aa9.58□□□□□ -0.88
RFX3-202ENST00000358730 ESYT2A0FGR8 921 aa9.58□□□□□ -0.88
RFX3-202ENST00000358730 RCCD1A6NED2 376 aa9.58□□□□□ -0.88
RFX3-202ENST00000358730 NKRFO15226 690 aaKnown RBP eCLIP9.58□□□□□ -0.88
RFX3-202ENST00000358730 TUBBP07437 444 aa9.58□□□□□ -0.88
RFX3-202ENST00000358730 PDHBP11177 359 aa9.58□□□□□ -0.88
RFX3-202ENST00000358730 RHBDL3P58872 404 aa9.58□□□□□ -0.88
RFX3-202ENST00000358730 ORC2Q13416 577 aaPredicted RBP9.58□□□□□ -0.88
RFX3-202ENST00000358730 TMEM266Q2M3C6 531 aa9.58□□□□□ -0.88
RFX3-202ENST00000358730 PRR5LQ6MZQ0 368 aa9.58□□□□□ -0.88
RFX3-202ENST00000358730 ZSCAN29Q8IWY8 852 aaPredicted RBP9.58□□□□□ -0.88
RFX3-202ENST00000358730 CCDC170Q8IYT3 715 aa9.58□□□□□ -0.88
RFX3-202ENST00000358730 LRRC47Q8N1G4 583 aaKnown RBP9.58□□□□□ -0.88
RFX3-202ENST00000358730 LACRTQ9GZZ8 138 aa9.58□□□□□ -0.88
RFX3-202ENST00000358730 SEMA6BQ9H3T3 888 aa9.58□□□□□ -0.88
RFX3-202ENST00000358730 LRWD1Q9UFC0 647 aa9.58□□□□□ -0.88
RFX3-202ENST00000358730 FOCADQ5VW36 1801 aa9.58□□□□□ -0.88
RFX3-202ENST00000358730 MACROD2A1Z1Q3 448 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 POTEMA6NI47 508 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 EIF3CLB5ME19 914 aaKnown RBP9.57□□□□□ -0.88
RFX3-202ENST00000358730 SLC37A4O43826 429 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 TDP2O95551 362 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 SMARCA1P28370 1054 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 ADCY7P51828 1080 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 EIF6P56537 245 aaKnown RBP9.57□□□□□ -0.88
RFX3-202ENST00000358730 CYP27A1Q02318 531 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 GRB10Q13322 594 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 CASP8Q14790 479 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 ZNF662Q6ZS27 426 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 FAM196AQ6ZSG2 479 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 LARP4BQ92615 738 aaKnown RBP9.57□□□□□ -0.88
RFX3-202ENST00000358730 COA7Q96BR5 231 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 ERGIC2Q96RQ1 377 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 EIF3CQ99613 913 aaKnown RBP9.57□□□□□ -0.88
RFX3-202ENST00000358730 VPS18Q9P253 973 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 STK17AQ9UEE5 414 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 LTBP4Q8N2S1 1624 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 MYMKA6NI61 221 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 IL1R1P14778 569 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 ATP2B4P23634 1241 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms