RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 ATP2B2Q01814 1243 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 ST3GAL1Q11201 340 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 GRM1Q13255 1194 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 ME3Q16798 604 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 MCMDC2Q4G0Z9 681 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 ZMYM1Q5SVZ6 1142 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 AP1ARQ63HQ0 302 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 IQCA1Q86XH1 822 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 CEP57L1Q8IYX8 460 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 TMTC2Q8N394 836 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 OTUD6BQ8N6M0 293 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 NECAB1Q8N987 351 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 SUPT20HQ8NEM7 779 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 TTLL11Q8NHH1 800 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 FAM174AQ8TBP5 190 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 ARHGEF1Q92888 912 aaKnown RBP4.49□□□□□ -1.69
CNGA1-201ENST00000358519 MAP4K1Q92918 833 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 DHX58Q96C10 678 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 ITPKCQ96DU7 683 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 CDK15Q96Q40 435 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 NAT10Q9H0A0 1025 aaKnown RBP4.49□□□□□ -1.69
CNGA1-201ENST00000358519 TBC1D2BQ9UPU7 963 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 RIPOR2Q9Y4F9 1068 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 ANKRD31Q8N7Z5 1873 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 KRBA1A5PL33 1030 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 LRRIQ3A6PVS8 624 aaPredicted RBP4.49□□□□□ -1.69
CNGA1-201ENST00000358519 IRS4O14654 1257 aaPredicted RBP4.49□□□□□ -1.69
CNGA1-201ENST00000358519 WDHD1O75717 1129 aaPredicted RBP4.49□□□□□ -1.69
CNGA1-201ENST00000358519 SASH1O94885 1247 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 PDE8BO95263 885 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 IPO7O95373 1038 aaKnown RBP4.49□□□□□ -1.69
CNGA1-201ENST00000358519 SYF2O95926 243 aaKnown RBP4.49□□□□□ -1.69
CNGA1-201ENST00000358519 MYBL2P10244 700 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 IBSPP21815 317 aaPredicted RBP4.49□□□□□ -1.69
CNGA1-201ENST00000358519 ATP2B4P23634 1241 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 FNTAP49354 379 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 RBM5P52756 815 aaKnown RBP eCLIP4.49□□□□□ -1.69
CNGA1-201ENST00000358519 NR5A1Q13285 461 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 WLSQ5T9L3 541 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 ATG9AQ7Z3C6 839 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 SRGAP1Q7Z6B7 1085 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 VGLL2Q8N8G2 317 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 ARMC2Q8NEN0 867 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 NEDD1Q8NHV4 660 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 ERCC4Q92889 916 aaPredicted RBP4.49□□□□□ -1.69
CNGA1-201ENST00000358519 SH3GL3Q99963 347 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 TSEN34Q9BSV6 310 aaKnown RBP4.49□□□□□ -1.69
CNGA1-201ENST00000358519 TAF1DQ9H5J8 278 aaPredicted RBP4.49□□□□□ -1.69
CNGA1-201ENST00000358519 IRAK4Q9NWZ3 460 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 PUF60Q9UHX1 559 aaKnown RBP4.49□□□□□ -1.69
CNGA1-201ENST00000358519 PPP2R2CQ9Y2T4 447 aa4.49□□□□□ -1.69
CNGA1-201ENST00000358519 A0A1B0GUA9 196 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 FRMD3A2A2Y4 597 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 EME2A4GXA9 379 aaPredicted RBP4.48□□□□□ -1.69
CNGA1-201ENST00000358519 TMCO5BA8MYB1 307 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 H0YIN7 160 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 RNF113AO15541 343 aaKnown RBP4.48□□□□□ -1.69
CNGA1-201ENST00000358519 CUTAO60888 179 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 SHOX2O60902 331 aaPredicted RBP4.48□□□□□ -1.69
CNGA1-201ENST00000358519 SKAP2O75563 359 aaPredicted RBP4.48□□□□□ -1.69
CNGA1-201ENST00000358519 PRPF6O94906 941 aaKnown RBP4.48□□□□□ -1.69
CNGA1-201ENST00000358519 CLSTN1O94985 981 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 IRAK1P51617 712 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 USP46P62068 366 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 HDLBPQ00341 1268 aaKnown RBP4.48□□□□□ -1.69
CNGA1-201ENST00000358519 PROSER3Q2NL68 480 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 CRY2Q49AN0 593 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 STYK1Q6J9G0 422 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 AACSQ86V21 672 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 IGSF22Q8N9C0 903 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 MSANTD4Q8NCY6 345 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 CCDC26Q8TAB7 109 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 APPBP2Q92624 585 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 XAGE2Q96GT9 111 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 RBM17Q96I25 401 aaKnown RBP4.48□□□□□ -1.69
CNGA1-201ENST00000358519 FAM210AQ96ND0 272 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 BAG1Q99933 345 aaPredicted RBP4.48□□□□□ -1.69
CNGA1-201ENST00000358519 AGXT2Q9BYV1 514 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 RNF41Q9H4P4 317 aaPredicted RBP4.48□□□□□ -1.69
CNGA1-201ENST00000358519 ZNF287Q9HBT7 754 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 GINM1Q9NU53 330 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 SPATS2LQ9NUQ6 558 aaKnown RBP4.48□□□□□ -1.69
CNGA1-201ENST00000358519 HACL1Q9UJ83 578 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 ANAPC4Q9UJX5 808 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 CDC14CA4D256 554 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 DDNO94850 711 aaPredicted RBP4.48□□□□□ -1.69
CNGA1-201ENST00000358519 LDHCP07864 332 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 RHOXF2BP0C7M4 288 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 ALDH1B1P30837 517 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 VSNL1P62760 191 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 SLC39A6Q13433 755 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 ADCK5Q3MIX3 580 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 LMBR1LQ6UX01 489 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 UBE3BQ7Z3V4 1068 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 FCHSD1Q86WN1 690 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 ANKRD18AQ8IVF6 992 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 CCAR1Q8IX12 1150 aaKnown RBP4.48□□□□□ -1.69
CNGA1-201ENST00000358519 AMOTL1Q8IY63 956 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 KIRREL3Q8IZU9 778 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 BCAS4Q8TDM0 211 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms