RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 GTPBP6O43824 516 aaPredicted RBP16.12■□□□□ 0.17
NIPAL3-203ENST00000358028 STX10O60499 249 aa16.12■□□□□ 0.17
NIPAL3-203ENST00000358028 CD44P16070 742 aaKnown RBP16.12■□□□□ 0.17
NIPAL3-203ENST00000358028 NOVP48745 357 aa16.12■□□□□ 0.17
NIPAL3-203ENST00000358028 SPATA1Q5VX52 437 aa16.12■□□□□ 0.17
NIPAL3-203ENST00000358028 TEPSINQ96N21 525 aa16.12■□□□□ 0.17
NIPAL3-203ENST00000358028 SAMSN1Q9NSI8 373 aaKnown RBP16.12■□□□□ 0.17
NIPAL3-203ENST00000358028 OGFRQ9NZT2 677 aa16.12■□□□□ 0.17
NIPAL3-203ENST00000358028 FAM198AQ9UFP1 575 aa16.12■□□□□ 0.17
NIPAL3-203ENST00000358028 FZD1Q9UP38 647 aa16.12■□□□□ 0.17
NIPAL3-203ENST00000358028 SIPA1L1O43166 1804 aa16.11■□□□□ 0.17
NIPAL3-203ENST00000358028 PLIN4Q96Q06 1357 aa16.11■□□□□ 0.17
NIPAL3-203ENST00000358028 SMARCA1P28370 1054 aa16.11■□□□□ 0.17
NIPAL3-203ENST00000358028 TXLNAP40222 546 aa16.11■□□□□ 0.17
NIPAL3-203ENST00000358028 TNNI2P48788 182 aa16.11■□□□□ 0.17
NIPAL3-203ENST00000358028 TCP10Q12799 353 aa16.11■□□□□ 0.17
NIPAL3-203ENST00000358028 NBPF12Q5TAG4 269 aaPredicted RBP16.11■□□□□ 0.17
NIPAL3-203ENST00000358028 FKBP1CQ5VVH2 108 aa16.11■□□□□ 0.17
NIPAL3-203ENST00000358028 MOB2Q70IA6 237 aa16.11■□□□□ 0.17
NIPAL3-203ENST00000358028 RASGRP2Q7LDG7 609 aa16.11■□□□□ 0.17
NIPAL3-203ENST00000358028 CEP95Q96GE4 821 aa16.11■□□□□ 0.17
NIPAL3-203ENST00000358028 SRRTQ9BXP5 876 aaKnown RBP16.11■□□□□ 0.17
NIPAL3-203ENST00000358028 GBA2Q9HCG7 927 aaPredicted RBP16.11■□□□□ 0.17
NIPAL3-203ENST00000358028 MYH8P13535 1937 aa16.11■□□□□ 0.17
NIPAL3-203ENST00000358028 PPP1R3GB7ZBB8 358 aa16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 INF2Q27J81 1249 aa16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 SYT10Q6XYQ8 523 aa16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 SAPCD2Q86UD0 394 aa16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 FAM83AQ86UY5 434 aa16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 HOMER1Q86YM7 354 aa16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 TMEM139Q8IV31 216 aa16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 CCDC12Q8WUD4 166 aaPredicted RBP16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 STAMQ92783 540 aa16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 RRP36Q96EU6 259 aaKnown RBP16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 DDX4Q9NQI0 724 aaKnown RBP16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 A0A1B0GTH6 734 aa16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 NAPAP54920 295 aa16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 PRKG1Q13976 671 aa16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 PTPN21Q16825 1174 aa16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 KLHL10Q6JEL2 608 aa16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 DTHD1Q6ZMT9 781 aa16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 ZFPM1Q8IX07 1006 aa16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 BAG1Q99933 345 aaPredicted RBP16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 IDI2Q9BXS1 227 aa16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 ZMYND12Q9H0C1 365 aa16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 BLZF1Q9H2G9 400 aa16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 CPVLQ9H3G5 476 aa16.1■□□□□ 0.17
NIPAL3-203ENST00000358028 NF2P35240 595 aa16.09■□□□□ 0.17
NIPAL3-203ENST00000358028 STX17P56962 302 aa16.09■□□□□ 0.17
NIPAL3-203ENST00000358028 PICALMQ13492 652 aa16.09■□□□□ 0.17
NIPAL3-203ENST00000358028 NR1I3Q14994 352 aa16.09■□□□□ 0.17
NIPAL3-203ENST00000358028 USP17L2Q6R6M4 530 aa16.09■□□□□ 0.17
NIPAL3-203ENST00000358028 KRT25Q7Z3Z0 450 aa16.09■□□□□ 0.17
NIPAL3-203ENST00000358028 REXO1L1PQ8IX06 675 aa16.09■□□□□ 0.17
NIPAL3-203ENST00000358028 C2orf69Q8N8R5 385 aa16.09■□□□□ 0.17
NIPAL3-203ENST00000358028 CAPNS2Q96L46 248 aa16.09■□□□□ 0.17
NIPAL3-203ENST00000358028 CTAGE1Q96RT6 745 aa16.09■□□□□ 0.17
NIPAL3-203ENST00000358028 MTRQ99707 1265 aa16.09■□□□□ 0.17
NIPAL3-203ENST00000358028 C6orf50Q9HD87 102 aa16.09■□□□□ 0.17
NIPAL3-203ENST00000358028 WBP1LQ9NX94 342 aa16.09■□□□□ 0.17
NIPAL3-203ENST00000358028 LAD1O00515 517 aa16.08■□□□□ 0.17
NIPAL3-203ENST00000358028 STAT6P42226 847 aa16.08■□□□□ 0.17
NIPAL3-203ENST00000358028 GOLGA8FQ08AF8 430 aa16.08■□□□□ 0.17
NIPAL3-203ENST00000358028 GOLGA8DPQ0D2H9 430 aa16.08■□□□□ 0.17
NIPAL3-203ENST00000358028 CDKAL1Q5VV42 579 aa16.08■□□□□ 0.17
NIPAL3-203ENST00000358028 SMYD4Q8IYR2 804 aaPredicted RBP16.08■□□□□ 0.17
NIPAL3-203ENST00000358028 FAM151AQ8WW52 585 aa16.08■□□□□ 0.17
NIPAL3-203ENST00000358028 HHIPL1Q96JK4 782 aa16.08■□□□□ 0.17
NIPAL3-203ENST00000358028 ARID3AQ99856 593 aa16.08■□□□□ 0.17
NIPAL3-203ENST00000358028 TMEM60Q9H2L4 133 aa16.08■□□□□ 0.17
NIPAL3-203ENST00000358028 SEC63Q9UGP8 760 aaKnown RBP16.08■□□□□ 0.17
NIPAL3-203ENST00000358028 CTNND2Q9UQB3 1225 aa16.08■□□□□ 0.17
NIPAL3-203ENST00000358028 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.08■□□□□ 0.176e-6■□□□□ 9.8
NIPAL3-203ENST00000358028 PRPHP41219 470 aa16.08■□□□□ 0.16
NIPAL3-203ENST00000358028 HUNKP57058 714 aa16.08■□□□□ 0.16
NIPAL3-203ENST00000358028 GABPAQ06546 454 aa16.08■□□□□ 0.16
NIPAL3-203ENST00000358028 TTLL12Q14166 644 aaPredicted RBP16.08■□□□□ 0.16
NIPAL3-203ENST00000358028 KARSQ15046 597 aaKnown RBP16.08■□□□□ 0.16
NIPAL3-203ENST00000358028 CYP4F22Q6NT55 531 aa16.08■□□□□ 0.16
NIPAL3-203ENST00000358028 TRIM65Q6PJ69 517 aa16.08■□□□□ 0.16
NIPAL3-203ENST00000358028 APTXQ7Z2E3 356 aaKnown RBP16.08■□□□□ 0.16
NIPAL3-203ENST00000358028 TC2NQ8N9U0 490 aa16.08■□□□□ 0.16
NIPAL3-203ENST00000358028 PANX2Q96RD6 677 aa16.08■□□□□ 0.16
NIPAL3-203ENST00000358028 DISC1Q9NRI5 854 aa16.08■□□□□ 0.16
NIPAL3-203ENST00000358028 RMND1Q9NWS8 449 aa16.08■□□□□ 0.16
NIPAL3-203ENST00000358028 DDX41Q9UJV9 622 aaKnown RBP16.08■□□□□ 0.16
NIPAL3-203ENST00000358028 PPP2R2CQ9Y2T4 447 aa16.08■□□□□ 0.16
NIPAL3-203ENST00000358028 SMCO2A6NFE2 343 aa16.07■□□□□ 0.16
NIPAL3-203ENST00000358028 USP17L5A8MUK1 530 aa16.07■□□□□ 0.16
NIPAL3-203ENST00000358028 RPN1P04843 607 aaKnown RBP16.07■□□□□ 0.16
NIPAL3-203ENST00000358028 GNA11P29992 359 aa16.07■□□□□ 0.16
NIPAL3-203ENST00000358028 ECE1P42892 770 aa16.07■□□□□ 0.16
NIPAL3-203ENST00000358028 NONOQ15233 471 aaKnown RBP eCLIP16.07■□□□□ 0.16
NIPAL3-203ENST00000358028 SUPT20HL1Q3ZLR7 823 aa16.07■□□□□ 0.16
NIPAL3-203ENST00000358028 RRAGBQ5VZM2 374 aa16.07■□□□□ 0.16
NIPAL3-203ENST00000358028 PIGSQ96S52 555 aa16.07■□□□□ 0.16
NIPAL3-203ENST00000358028 NAA15Q9BXJ9 866 aaKnown RBP16.07■□□□□ 0.16
NIPAL3-203ENST00000358028 MTMR4Q9NYA4 1195 aa16.07■□□□□ 0.16
NIPAL3-203ENST00000358028 ATAD5Q96QE3 1844 aa16.06■□□□□ 0.16
NIPAL3-203ENST00000358028 IGKV6D-41A0A0C4DH26 115 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms