RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 KIF5BP33176 963 aa26.36■■□□□ 1.81
NPAS3-203ENST00000357798 GLE1Q53GS7 698 aaKnown RBP26.36■■□□□ 1.81
NPAS3-203ENST00000357798 B4GALNT4Q76KP1 1039 aa26.36■■□□□ 1.81
NPAS3-203ENST00000357798 NCAPGQ9BPX3 1015 aa26.36■■□□□ 1.81
NPAS3-203ENST00000357798 LAD1O00515 517 aa26.35■■□□□ 1.81
NPAS3-203ENST00000357798 IL6STP40189 918 aaPredicted RBP26.35■■□□□ 1.81
NPAS3-203ENST00000357798 CCDC152Q4G0S7 254 aa26.35■■□□□ 1.81
NPAS3-203ENST00000357798 CCDC181Q5TID7 509 aa26.35■■□□□ 1.81
NPAS3-203ENST00000357798 SPATS2Q86XZ4 545 aaKnown RBP26.35■■□□□ 1.81
NPAS3-203ENST00000357798 ARL8AQ96BM9 186 aa26.35■■□□□ 1.81
NPAS3-203ENST00000357798 ARHGAP20Q9P2F6 1191 aa26.35■■□□□ 1.81
NPAS3-203ENST00000357798 PLEKP08567 350 aaPredicted RBP26.35■■□□□ 1.81
NPAS3-203ENST00000357798 PRPHP41219 470 aa26.35■■□□□ 1.81
NPAS3-203ENST00000357798 PAFAH1B1P43034 410 aa26.35■■□□□ 1.81
NPAS3-203ENST00000357798 KIF11P52732 1056 aa26.35■■□□□ 1.81
NPAS3-203ENST00000357798 APBA1Q02410 837 aa26.35■■□□□ 1.81
NPAS3-203ENST00000357798 SLC4A9Q96Q91 983 aa26.35■■□□□ 1.81
NPAS3-203ENST00000357798 TMEM60Q9H2L4 133 aa26.35■■□□□ 1.81
NPAS3-203ENST00000357798 MYH10P35580 1976 aa26.35■■□□□ 1.81
NPAS3-203ENST00000357798 CCDC194A0A1B0GVG4 234 aa26.35■■□□□ 1.81
NPAS3-203ENST00000357798 M0R2N6 131 aa26.35■■□□□ 1.81
NPAS3-203ENST00000357798 USP8P40818 1118 aa26.35■■□□□ 1.81
NPAS3-203ENST00000357798 CHRNDQ07001 517 aa26.35■■□□□ 1.81
NPAS3-203ENST00000357798 COBLL1Q53SF7 1204 aa26.35■■□□□ 1.81
NPAS3-203ENST00000357798 NFRKBQ6P4R8 1299 aa26.35■■□□□ 1.81
NPAS3-203ENST00000357798 SLC7A5Q01650 507 aa26.34■■□□□ 1.81
NPAS3-203ENST00000357798 SUSD4Q5VX71 490 aa26.34■■□□□ 1.81
NPAS3-203ENST00000357798 TYW1BQ6NUM6 668 aa26.34■■□□□ 1.81
NPAS3-203ENST00000357798 TMED8Q6PL24 325 aaPredicted RBP26.34■■□□□ 1.81
NPAS3-203ENST00000357798 HINFPQ9BQA5 517 aa26.34■■□□□ 1.81
NPAS3-203ENST00000357798 PJA2O43164 708 aa26.34■■□□□ 1.81
NPAS3-203ENST00000357798 PDE4DQ08499 809 aa26.34■■□□□ 1.81
NPAS3-203ENST00000357798 LAMB2P55268 1798 aa26.33■■□□□ 1.81
NPAS3-203ENST00000357798 COL1A1P02452 1464 aaPredicted RBP26.33■■□□□ 1.81
NPAS3-203ENST00000357798 NMT2O60551 498 aa26.33■■□□□ 1.81
NPAS3-203ENST00000357798 C8orf74Q6P047 294 aa26.33■■□□□ 1.81
NPAS3-203ENST00000357798 CNPY4Q8N129 248 aa26.33■■□□□ 1.81
NPAS3-203ENST00000357798 LRRC15Q8TF66 581 aa26.33■■□□□ 1.81
NPAS3-203ENST00000357798 C7orf25Q9BPX7 421 aa26.33■■□□□ 1.81
NPAS3-203ENST00000357798 USP17L12C9JPN9 530 aa26.33■■□□□ 1.81
NPAS3-203ENST00000357798 USP17L21D6R901 530 aa26.33■■□□□ 1.81
NPAS3-203ENST00000357798 ZEB2O60315 1214 aa26.33■■□□□ 1.81
NPAS3-203ENST00000357798 DAGLBQ8NCG7 672 aa26.33■■□□□ 1.81
NPAS3-203ENST00000357798 TRIM9Q9C026 710 aa26.33■■□□□ 1.81
NPAS3-203ENST00000357798 FLT1P17948 1338 aa26.32■■□□□ 1.8
NPAS3-203ENST00000357798 HNRNPH1P31943 449 aaKnown RBP26.32■■□□□ 1.8
NPAS3-203ENST00000357798 EIF4A3P38919 411 aaKnown RBP26.32■■□□□ 1.8
NPAS3-203ENST00000357798 C2CD5Q86YS7 1000 aa26.32■■□□□ 1.8
NPAS3-203ENST00000357798 ZIM3Q96PE6 472 aa26.32■■□□□ 1.8
NPAS3-203ENST00000357798 MYCBPQ99417 103 aaPredicted RBP26.32■■□□□ 1.8
NPAS3-203ENST00000357798 SIK3Q9Y2K2 1263 aa26.32■■□□□ 1.8
NPAS3-203ENST00000357798 CASZ1Q86V15 1759 aa26.32■■□□□ 1.8
NPAS3-203ENST00000357798 MATR3P43243 847 aaKnown RBP eCLIP26.32■■□□□ 1.8
NPAS3-203ENST00000357798 AK8Q96MA6 479 aa26.32■■□□□ 1.8
NPAS3-203ENST00000357798 PLIN2Q99541 437 aa26.32■■□□□ 1.8
NPAS3-203ENST00000357798 TSKSQ9UJT2 592 aa26.32■■□□□ 1.8
NPAS3-203ENST00000357798 PHLPP1O60346 1717 aa26.32■■□□□ 1.8
NPAS3-203ENST00000357798 STRCP1A6NGW2 1772 aa26.31■■□□□ 1.8
NPAS3-203ENST00000357798 RASGRP4Q8TDF6 673 aa26.31■■□□□ 1.8
NPAS3-203ENST00000357798 NDUFAB1O14561 156 aa26.31■■□□□ 1.8
NPAS3-203ENST00000357798 PLCG1P19174 1290 aa26.31■■□□□ 1.8
NPAS3-203ENST00000357798 STK4Q13043 487 aa26.31■■□□□ 1.8
NPAS3-203ENST00000357798 CCDC178Q5BJE1 867 aa26.31■■□□□ 1.8
NPAS3-203ENST00000357798 KDM7AQ6ZMT4 941 aa26.31■■□□□ 1.8
NPAS3-203ENST00000357798 PAGR1Q9BTK6 254 aa26.31■■□□□ 1.8
NPAS3-203ENST00000357798 RABEP2Q9H5N1 569 aa26.31■■□□□ 1.8
NPAS3-203ENST00000357798 RNF14Q9UBS8 474 aa26.31■■□□□ 1.8
NPAS3-203ENST00000357798 PDCLQ13371 301 aa26.3■■□□□ 1.8
NPAS3-203ENST00000357798 EMC10Q5UCC4 262 aa26.3■■□□□ 1.8
NPAS3-203ENST00000357798 GALNT17Q6IS24 598 aa26.3■■□□□ 1.8
NPAS3-203ENST00000357798 CCDC91Q7Z6B0 441 aa26.3■■□□□ 1.8
NPAS3-203ENST00000357798 CABP7Q86V35 215 aa26.3■■□□□ 1.8
NPAS3-203ENST00000357798 IFT20Q8IY31 132 aa26.3■■□□□ 1.8
NPAS3-203ENST00000357798 GPKOWQ92917 476 aaPredicted RBP eCLIP26.3■■□□□ 1.8
NPAS3-203ENST00000357798 PCDHA6Q9UN73 950 aa26.3■■□□□ 1.8
NPAS3-203ENST00000357798 PCDHA8Q9Y5H6 950 aa26.3■■□□□ 1.8
NPAS3-203ENST00000357798 AKR1B10O60218 316 aa26.3■■□□□ 1.8
NPAS3-203ENST00000357798 ASIC1P78348 528 aa26.3■■□□□ 1.8
NPAS3-203ENST00000357798 VWA3BQ502W6 1294 aa26.3■■□□□ 1.8
NPAS3-203ENST00000357798 EEF2KMTQ96G04 330 aa26.3■■□□□ 1.8
NPAS3-203ENST00000357798 SAMM50Q9Y512 469 aa26.3■■□□□ 1.8
NPAS3-203ENST00000357798 FAM47AQ5JRC9 791 aa26.29■■□□□ 1.8
NPAS3-203ENST00000357798 TTC19Q6DKK2 380 aaPredicted RBP26.29■■□□□ 1.8
NPAS3-203ENST00000357798 KCNV1Q6PIU1 500 aa26.29■■□□□ 1.8
NPAS3-203ENST00000357798 PRPF38AQ8NAV1 312 aaKnown RBP26.29■■□□□ 1.8
NPAS3-203ENST00000357798 GDF3Q9NR23 364 aa26.29■■□□□ 1.8
NPAS3-203ENST00000357798 BCL9O00512 1426 aa26.29■■□□□ 1.8
NPAS3-203ENST00000357798 ABCB11O95342 1321 aa26.29■■□□□ 1.8
NPAS3-203ENST00000357798 MAGEA1P43355 309 aa26.29■■□□□ 1.8
NPAS3-203ENST00000357798 CNNM4Q6P4Q7 775 aa26.29■■□□□ 1.8
NPAS3-203ENST00000357798 MREGQ8N565 214 aa26.29■■□□□ 1.8
NPAS3-203ENST00000357798 TLR10Q9BXR5 811 aa26.29■■□□□ 1.8
NPAS3-203ENST00000357798 SCN7AQ01118 1682 aa26.29■■□□□ 1.8
NPAS3-203ENST00000357798 MRPS25P82663 173 aaKnown RBP26.29■■□□□ 1.8
NPAS3-203ENST00000357798 RNF10Q8N5U6 811 aaKnown RBP26.29■■□□□ 1.8
NPAS3-203ENST00000357798 RBM12Q9NTZ6 932 aaKnown RBP26.29■■□□□ 1.8
NPAS3-203ENST00000357798 TCP11L1Q9NUJ3 509 aa26.29■■□□□ 1.8
NPAS3-203ENST00000357798 SMARCAL1Q9NZC9 954 aa26.29■■□□□ 1.8
NPAS3-203ENST00000357798 ABCA3Q99758 1704 aa26.28■■□□□ 1.8
NPAS3-203ENST00000357798 KIAA1551Q9HCM1 1747 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms