RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 C7orf25Q9BPX7 421 aa17.76■□□□□ 0.43
PHTF1-201ENST00000357783 THAP9Q9H5L6 903 aa17.76■□□□□ 0.43
PHTF1-201ENST00000357783 MAGEC2Q9UBF1 373 aaPredicted RBP17.76■□□□□ 0.43
PHTF1-201ENST00000357783 LRWD1Q9UFC0 647 aa17.76■□□□□ 0.43
PHTF1-201ENST00000357783 PCDHAC2Q9Y5I4 1007 aa17.76■□□□□ 0.43
PHTF1-201ENST00000357783 PNMA6FA0A0J9YX94 578 aa17.76■□□□□ 0.43
PHTF1-201ENST00000357783 LGALS16A8MUM7 142 aa17.76■□□□□ 0.43
PHTF1-201ENST00000357783 EDIL3O43854 480 aa17.76■□□□□ 0.43
PHTF1-201ENST00000357783 KRT9P35527 623 aa17.76■□□□□ 0.43
PHTF1-201ENST00000357783 CSGALNACT2Q8N6G5 542 aa17.76■□□□□ 0.43
PHTF1-201ENST00000357783 UBXN4Q92575 508 aa17.76■□□□□ 0.43
PHTF1-201ENST00000357783 HPS3Q969F9 1004 aa17.76■□□□□ 0.43
PHTF1-201ENST00000357783 DHTKD1Q96HY7 919 aaPredicted RBP17.76■□□□□ 0.43
PHTF1-201ENST00000357783 FAM196BA6NMK8 535 aa17.75■□□□□ 0.43
PHTF1-201ENST00000357783 TADA3O75528 432 aa17.75■□□□□ 0.43
PHTF1-201ENST00000357783 FECHP22830 423 aa17.75■□□□□ 0.43
PHTF1-201ENST00000357783 EEF1GP26641 437 aaKnown RBP17.75■□□□□ 0.43
PHTF1-201ENST00000357783 TCP10Q12799 353 aa17.75■□□□□ 0.43
PHTF1-201ENST00000357783 KIAA0825Q8IV33 1275 aa17.75■□□□□ 0.43
PHTF1-201ENST00000357783 MASTLQ96GX5 879 aa17.75■□□□□ 0.43
PHTF1-201ENST00000357783 DUSP9Q99956 384 aaKnown RBP17.75■□□□□ 0.43
PHTF1-201ENST00000357783 DDX41Q9UJV9 622 aaKnown RBP17.75■□□□□ 0.43
PHTF1-201ENST00000357783 MYO3BQ8WXR4 1341 aa17.75■□□□□ 0.43
PHTF1-201ENST00000357783 POTEMA6NI47 508 aa17.75■□□□□ 0.43
PHTF1-201ENST00000357783 USP17L10C9JJH3 530 aa17.75■□□□□ 0.43
PHTF1-201ENST00000357783 AMPD3Q01432 767 aa17.75■□□□□ 0.43
PHTF1-201ENST00000357783 GRB10Q13322 594 aa17.75■□□□□ 0.43
PHTF1-201ENST00000357783 TMEM266Q2M3C6 531 aa17.75■□□□□ 0.43
PHTF1-201ENST00000357783 TMTC1Q8IUR5 882 aa17.75■□□□□ 0.43
PHTF1-201ENST00000357783 MB21D1Q8N884 522 aa17.75■□□□□ 0.43
PHTF1-201ENST00000357783 AKT1S1Q96B36 256 aa17.75■□□□□ 0.43
PHTF1-201ENST00000357783 GOLGB1Q14789 3259 aaKnown RBP17.74■□□□□ 0.43
PHTF1-201ENST00000357783 MAP3K9P80192 1104 aa17.74■□□□□ 0.43
PHTF1-201ENST00000357783 SEMA3FQ13275 785 aa17.74■□□□□ 0.43
PHTF1-201ENST00000357783 SHROOM1Q2M3G4 852 aaPredicted RBP17.74■□□□□ 0.43
PHTF1-201ENST00000357783 P2RX5Q93086 422 aa17.74■□□□□ 0.43
PHTF1-201ENST00000357783 CDK5RAP3Q96JB5 506 aa17.74■□□□□ 0.43
PHTF1-201ENST00000357783 RIC8AQ9NPQ8 531 aa17.74■□□□□ 0.43
PHTF1-201ENST00000357783 OGFRQ9NZT2 677 aa17.74■□□□□ 0.43
PHTF1-201ENST00000357783 MRFAP1Q9Y605 127 aa17.74■□□□□ 0.43
PHTF1-201ENST00000357783 MYH7BA7E2Y1 1941 aa17.74■□□□□ 0.43
PHTF1-201ENST00000357783 GREB1LQ9C091 1923 aaPredicted RBP17.74■□□□□ 0.43
PHTF1-201ENST00000357783 MCM6Q14566 821 aa17.74■□□□□ 0.43
PHTF1-201ENST00000357783 ANKRD40Q6AI12 368 aa17.74■□□□□ 0.43
PHTF1-201ENST00000357783 CYP26C1Q6V0L0 522 aa17.74■□□□□ 0.43
PHTF1-201ENST00000357783 PNMA5Q96PV4 448 aa17.74■□□□□ 0.43
PHTF1-201ENST00000357783 B4DLN1 442 aa17.73■□□□□ 0.43
PHTF1-201ENST00000357783 H2AFXP16104 143 aaPredicted RBP17.73■□□□□ 0.43
PHTF1-201ENST00000357783 CCNE1P24864 410 aa17.73■□□□□ 0.43
PHTF1-201ENST00000357783 FXR2P51116 673 aaKnown RBP eCLIP17.73■□□□□ 0.43
PHTF1-201ENST00000357783 SV2BQ7L1I2 683 aa17.73■□□□□ 0.43
PHTF1-201ENST00000357783 DNAJC18Q9H819 358 aa17.73■□□□□ 0.43
PHTF1-201ENST00000357783 BLOC1S4Q9NUP1 217 aa17.73■□□□□ 0.43
PHTF1-201ENST00000357783 ZNF219Q9P2Y4 722 aaPredicted RBP17.73■□□□□ 0.43
PHTF1-201ENST00000357783 TTC26A0AVF1 554 aa17.73■□□□□ 0.43
PHTF1-201ENST00000357783 KIF5CO60282 957 aa17.73■□□□□ 0.43
PHTF1-201ENST00000357783 RBM5P52756 815 aaKnown RBP eCLIP17.73■□□□□ 0.43
PHTF1-201ENST00000357783 PPP2R3AQ06190 1150 aa17.73■□□□□ 0.43
PHTF1-201ENST00000357783 GPATCH4Q5T3I0 446 aaKnown RBP17.73■□□□□ 0.43
PHTF1-201ENST00000357783 PPP1R18Q6NYC8 613 aa17.73■□□□□ 0.43
PHTF1-201ENST00000357783 NOC3LQ8WTT2 800 aaKnown RBP17.73■□□□□ 0.43
PHTF1-201ENST00000357783 CUL5Q93034 780 aa17.73■□□□□ 0.43
PHTF1-201ENST00000357783 BICDL2A1A5D9 508 aa17.72■□□□□ 0.43
PHTF1-201ENST00000357783 APBA3O96018 575 aa17.72■□□□□ 0.43
PHTF1-201ENST00000357783 KIAA0895Q8NCT3 520 aa17.72■□□□□ 0.43
PHTF1-201ENST00000357783 ZNF507Q8TCN5 953 aa17.72■□□□□ 0.43
PHTF1-201ENST00000357783 SNX29Q8TEQ0 813 aa17.72■□□□□ 0.43
PHTF1-201ENST00000357783 NUDT12Q9BQG2 462 aa17.72■□□□□ 0.43
PHTF1-201ENST00000357783 TUBGCP2Q9BSJ2 902 aa17.72■□□□□ 0.43
PHTF1-201ENST00000357783 SLC39A2Q9NP94 309 aa17.72■□□□□ 0.43
PHTF1-201ENST00000357783 MYMKA6NI61 221 aa17.72■□□□□ 0.43
PHTF1-201ENST00000357783 EFCAB8A8MWE9 144 aa17.72■□□□□ 0.43
PHTF1-201ENST00000357783 ZBTB5O15062 677 aa17.72■□□□□ 0.43
PHTF1-201ENST00000357783 ZNF569Q5MCW4 686 aa17.72■□□□□ 0.43
PHTF1-201ENST00000357783 CNNM4Q6P4Q7 775 aa17.72■□□□□ 0.43
PHTF1-201ENST00000357783 DYMQ7RTS9 669 aa17.72■□□□□ 0.43
PHTF1-201ENST00000357783 GJA10Q969M2 543 aa17.72■□□□□ 0.43
PHTF1-201ENST00000357783 CNOT6LQ96LI5 555 aaKnown RBP17.72■□□□□ 0.43
PHTF1-201ENST00000357783 ZDHHC15Q96MV8 337 aa17.72■□□□□ 0.43
PHTF1-201ENST00000357783 CHP1Q99653 195 aa17.72■□□□□ 0.43
PHTF1-201ENST00000357783 SLF1Q9BQI6 1058 aa17.72■□□□□ 0.43
PHTF1-201ENST00000357783 ZNF446Q9NWS9 450 aa17.72■□□□□ 0.43
PHTF1-201ENST00000357783 SCN9AQ15858 1988 aa17.72■□□□□ 0.43
PHTF1-201ENST00000357783 ZSCAN29Q8IWY8 852 aaPredicted RBP17.71■□□□□ 0.43
PHTF1-201ENST00000357783 LARP4BQ92615 738 aaKnown RBP17.71■□□□□ 0.43
PHTF1-201ENST00000357783 RAB34Q9BZG1 259 aa17.71■□□□□ 0.43
PHTF1-201ENST00000357783 STK17AQ9UEE5 414 aa17.71■□□□□ 0.43
PHTF1-201ENST00000357783 SIPA1L1O43166 1804 aa17.71■□□□□ 0.43
PHTF1-201ENST00000357783 C10orf71Q711Q0 1435 aa17.71■□□□□ 0.43
PHTF1-201ENST00000357783 A0A1W2PQC6 194 aa17.71■□□□□ 0.43
PHTF1-201ENST00000357783 ABL1P00519 1130 aa17.71■□□□□ 0.43
PHTF1-201ENST00000357783 PODNQ7Z5L7 613 aa17.71■□□□□ 0.43
PHTF1-201ENST00000357783 UIMC1Q96RL1 719 aa17.71■□□□□ 0.43
PHTF1-201ENST00000357783 EHD4Q9H223 541 aa17.71■□□□□ 0.43
PHTF1-201ENST00000357783 PSTPIP2Q9H939 334 aa17.71■□□□□ 0.43
PHTF1-201ENST00000357783 DDX25Q9UHL0 483 aaKnown RBP17.71■□□□□ 0.43
PHTF1-201ENST00000357783 DDTLA6NHG4 134 aaPredicted RBP17.71■□□□□ 0.42
PHTF1-201ENST00000357783 MTIF2P46199 727 aaKnown RBP17.71■□□□□ 0.42
PHTF1-201ENST00000357783 CLK2P49760 499 aaKnown RBP17.71■□□□□ 0.42
PHTF1-201ENST00000357783 DNM2P50570 870 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms