RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 VWA3AA6NCI4 1184 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 ITGA6P23229 1130 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 LIFRP42702 1097 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 RANBP1P43487 201 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 MYL5Q02045 173 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 LAMB3Q13751 1172 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 SEZ6LQ9BYH1 1024 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 ACBD3Q9H3P7 528 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 MRFAP1Q9Y605 127 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 BBOX1O75936 387 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 KCNB1Q14721 858 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 PPP2R5BQ15173 497 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 RCSD1Q6JBY9 416 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 APTXQ7Z2E3 356 aaKnown RBP12.05□□□□□ -0.48
SND1-201ENST00000354725 MED15Q96RN5 788 aa12.05□□□□□ -0.48
SND1-201ENST00000354725 CUTAO60888 179 aa12.04□□□□□ -0.48
SND1-201ENST00000354725 MYL1P05976 194 aa12.04□□□□□ -0.48
SND1-201ENST00000354725 KRT40Q6A162 431 aa12.04□□□□□ -0.48
SND1-201ENST00000354725 B4GALNT2Q8NHY0 566 aa12.04□□□□□ -0.48
SND1-201ENST00000354725 CNKSR1Q969H4 720 aa12.04□□□□□ -0.48
SND1-201ENST00000354725 TMEM87BQ96K49 555 aa12.04□□□□□ -0.48
SND1-201ENST00000354725 CLIC6Q96NY7 704 aa12.04□□□□□ -0.48
SND1-201ENST00000354725 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.04□□□□□ -0.48
SND1-201ENST00000354725 TSGA10Q9BZW7 698 aa12.04□□□□□ -0.48
SND1-201ENST00000354725 HDAC9Q9UKV0 1011 aa12.04□□□□□ -0.48
SND1-201ENST00000354725 FGFR2P21802 821 aa12.04□□□□□ -0.48
SND1-201ENST00000354725 TOB1P50616 345 aaPredicted RBP12.04□□□□□ -0.48
SND1-201ENST00000354725 SLC8A3P57103 927 aa12.04□□□□□ -0.48
SND1-201ENST00000354725 ZBED6P86452 979 aa12.04□□□□□ -0.48
SND1-201ENST00000354725 LONRF2Q1L5Z9 754 aa12.04□□□□□ -0.48
SND1-201ENST00000354725 DALRD3Q5D0E6 543 aaKnown RBP12.04□□□□□ -0.48
SND1-201ENST00000354725 TLDC1Q6P9B6 456 aa12.04□□□□□ -0.48
SND1-201ENST00000354725 IQCF2Q8IXL9 164 aa12.04□□□□□ -0.48
SND1-201ENST00000354725 KIFC2Q96AC6 838 aa12.04□□□□□ -0.48
SND1-201ENST00000354725 WDR90Q96KV7 1748 aa12.04□□□□□ -0.48
SND1-201ENST00000354725 AIFM3Q96NN9 605 aa12.04□□□□□ -0.48
SND1-201ENST00000354725 EPC1Q9H2F5 836 aa12.04□□□□□ -0.48
SND1-201ENST00000354725 SENP2Q9HC62 589 aa12.04□□□□□ -0.48
SND1-201ENST00000354725 CAPN7Q9Y6W3 813 aa12.04□□□□□ -0.48
SND1-201ENST00000354725 ZNF213O14771 459 aa12.03□□□□□ -0.48
SND1-201ENST00000354725 PPEF1O14829 653 aaPredicted RBP12.03□□□□□ -0.48
SND1-201ENST00000354725 FECHP22830 423 aa12.03□□□□□ -0.48
SND1-201ENST00000354725 SYKP43405 635 aa12.03□□□□□ -0.48
SND1-201ENST00000354725 ARMC9Q7Z3E5 817 aa12.03□□□□□ -0.48
SND1-201ENST00000354725 TMC4Q7Z404 712 aa12.03□□□□□ -0.48
SND1-201ENST00000354725 GPR161Q8N6U8 529 aaKnown RBP12.03□□□□□ -0.48
SND1-201ENST00000354725 NEK9Q8TD19 979 aa12.03□□□□□ -0.48
SND1-201ENST00000354725 SYNPO2Q9UMS6 1093 aa12.03□□□□□ -0.48
SND1-201ENST00000354725 ADAMTSL1Q8N6G6 1762 aa12.03□□□□□ -0.48
SND1-201ENST00000354725 RCAN1P53805 252 aa12.03□□□□□ -0.48
SND1-201ENST00000354725 HAND2P61296 217 aa12.03□□□□□ -0.48
SND1-201ENST00000354725 MAP3K9P80192 1104 aa12.03□□□□□ -0.48
SND1-201ENST00000354725 PDE4BQ07343 736 aa12.03□□□□□ -0.48
SND1-201ENST00000354725 TTC39AQ5SRH9 613 aa12.03□□□□□ -0.48
SND1-201ENST00000354725 PI16Q6UXB8 463 aa12.03□□□□□ -0.48
SND1-201ENST00000354725 ZNF579Q8NAF0 562 aaKnown RBP12.03□□□□□ -0.48
SND1-201ENST00000354725 OR8K1Q8NGG5 319 aa12.03□□□□□ -0.48
SND1-201ENST00000354725 DNAI1Q9UI46 699 aa12.03□□□□□ -0.48
SND1-201ENST00000354725 MAST2Q6P0Q8 1798 aa12.03□□□□□ -0.48
SND1-201ENST00000354725 MYO1FO00160 1098 aa12.03□□□□□ -0.48
SND1-201ENST00000354725 IBSPP21815 317 aaPredicted RBP12.03□□□□□ -0.48
SND1-201ENST00000354725 FNTAP49354 379 aa12.03□□□□□ -0.48
SND1-201ENST00000354725 RSRC2Q7L4I2 434 aaKnown RBP12.03□□□□□ -0.48
SND1-201ENST00000354725 N6AMT1Q9Y5N5 214 aa12.03□□□□□ -0.48
SND1-201ENST00000354725 WTIPA6NIX2 430 aaPredicted RBP12.02□□□□□ -0.48
SND1-201ENST00000354725 KIF5CO60282 957 aa12.02□□□□□ -0.48
SND1-201ENST00000354725 SKIDA1Q1XH10 827 aa12.02□□□□□ -0.48
SND1-201ENST00000354725 THEMIS2Q5TEJ8 643 aa12.02□□□□□ -0.48
SND1-201ENST00000354725 LMBR1Q8WVP7 490 aa12.02□□□□□ -0.48
SND1-201ENST00000354725 FBXO2Q9UK22 296 aaPredicted RBP12.02□□□□□ -0.48
SND1-201ENST00000354725 MYO6Q9UM54 1294 aa12.02□□□□□ -0.48
SND1-201ENST00000354725 MINPP1Q9UNW1 487 aa12.02□□□□□ -0.48
SND1-201ENST00000354725 CBFA2T2O43439 604 aa12.02□□□□□ -0.49
SND1-201ENST00000354725 PBX1P40424 430 aa12.02□□□□□ -0.49
SND1-201ENST00000354725 RPS8P62241 208 aaKnown RBP12.02□□□□□ -0.49
SND1-201ENST00000354725 PNOCQ13519 176 aa12.02□□□□□ -0.49
SND1-201ENST00000354725 MORC3Q14149 939 aa12.02□□□□□ -0.49
SND1-201ENST00000354725 FILIP1LQ4L180 1135 aa12.02□□□□□ -0.49
SND1-201ENST00000354725 MAB21L3Q8N8X9 362 aa12.02□□□□□ -0.49
SND1-201ENST00000354725 TC2NQ8N9U0 490 aa12.02□□□□□ -0.49
SND1-201ENST00000354725 RPGRQ92834 1020 aaKnown RBP12.02□□□□□ -0.49
SND1-201ENST00000354725 ALG1Q9BT22 464 aa12.02□□□□□ -0.49
SND1-201ENST00000354725 PIH1D3Q9NQM4 214 aaKnown RBP12.02□□□□□ -0.49
SND1-201ENST00000354725 MYH8P13535 1937 aa12.02□□□□□ -0.49
SND1-201ENST00000354725 EBAG9O00559 213 aa12.02□□□□□ -0.49
SND1-201ENST00000354725 FKBP4Q02790 459 aaKnown RBP eCLIP12.02□□□□□ -0.491e-6■■■■□ 23.5
SND1-201ENST00000354725 CDC37Q16543 378 aaPredicted RBP12.02□□□□□ -0.49
SND1-201ENST00000354725 DBN1Q16643 649 aa12.02□□□□□ -0.49
SND1-201ENST00000354725 C15orf52Q6ZUT6 534 aaKnown RBP12.02□□□□□ -0.49
SND1-201ENST00000354725 STRBPQ96SI9 672 aaKnown RBP12.02□□□□□ -0.49
SND1-201ENST00000354725 PAGR1Q9BTK6 254 aa12.02□□□□□ -0.49
SND1-201ENST00000354725 EPB41L4AQ9HCS5 686 aaPredicted RBP12.02□□□□□ -0.49
SND1-201ENST00000354725 MYH1P12882 1939 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 TMEM232C9JQI7 657 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 ARHGAP6O43182 974 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 N4BP1O75113 896 aaKnown RBP12.01□□□□□ -0.49
SND1-201ENST00000354725 METAP2P50579 478 aaKnown RBP eCLIP12.01□□□□□ -0.494e-7■■■□□ 15.5
SND1-201ENST00000354725 GPSM2P81274 684 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 CCDC57Q2TAC2 916 aa12.01□□□□□ -0.49
SND1-201ENST00000354725 DDX20Q9UHI6 824 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms