RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 IQSEC1Q6DN90 963 aa18.7■□□□□ 0.58
PDGFA-201ENST00000354513 PLEKHM2Q8IWE5 1019 aa18.7■□□□□ 0.58
PDGFA-201ENST00000354513 ZBTB47Q9UFB7 747 aaPredicted RBP18.7■□□□□ 0.58
PDGFA-201ENST00000354513 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.69■□□□□ 0.58
PDGFA-201ENST00000354513 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.69■□□□□ 0.58
PDGFA-201ENST00000354513 RBM47A0AV96 593 aaKnown RBP18.69■□□□□ 0.58
PDGFA-201ENST00000354513 TLR3O15455 904 aaKnown RBP18.69■□□□□ 0.58
PDGFA-201ENST00000354513 B4GALT4O60513 344 aa18.69■□□□□ 0.58
PDGFA-201ENST00000354513 IGHDP01880 384 aa18.69■□□□□ 0.58
PDGFA-201ENST00000354513 SDSP20132 328 aa18.69■□□□□ 0.58
PDGFA-201ENST00000354513 ITGA7Q13683 1181 aa18.69■□□□□ 0.58
PDGFA-201ENST00000354513 ZNF365Q70YC5 407 aa18.69■□□□□ 0.58
PDGFA-201ENST00000354513 NOL8Q76FK4 1167 aaKnown RBP18.69■□□□□ 0.58
PDGFA-201ENST00000354513 WNT8AQ9H1J5 351 aa18.69■□□□□ 0.58
PDGFA-201ENST00000354513 CPVLQ9H3G5 476 aa18.69■□□□□ 0.58
PDGFA-201ENST00000354513 Q9Y3F1 56 aa18.69■□□□□ 0.58
PDGFA-201ENST00000354513 MYH7BA7E2Y1 1941 aa18.68■□□□□ 0.58
PDGFA-201ENST00000354513 TRIM6-TRIM34B2RNG4 842 aa18.68■□□□□ 0.58
PDGFA-201ENST00000354513 CABYRO75952 493 aa18.68■□□□□ 0.58
PDGFA-201ENST00000354513 FOSL2P15408 326 aa18.68■□□□□ 0.58
PDGFA-201ENST00000354513 DUSP28Q4G0W2 176 aa18.68■□□□□ 0.58
PDGFA-201ENST00000354513 B4GALNT3Q6L9W6 998 aa18.68■□□□□ 0.58
PDGFA-201ENST00000354513 KIAA1211Q6ZU35 1233 aa18.68■□□□□ 0.58
PDGFA-201ENST00000354513 USP38Q8NB14 1042 aa18.68■□□□□ 0.58
PDGFA-201ENST00000354513 RILPL2Q969X0 211 aa18.68■□□□□ 0.58
PDGFA-201ENST00000354513 ZKSCAN3Q9BRR0 538 aa18.68■□□□□ 0.58
PDGFA-201ENST00000354513 NOC4LQ9BVI4 516 aaKnown RBP18.68■□□□□ 0.58
PDGFA-201ENST00000354513 PBX4Q9BYU1 374 aa18.68■□□□□ 0.58
PDGFA-201ENST00000354513 AP5M1Q9H0R1 490 aa18.68■□□□□ 0.58
PDGFA-201ENST00000354513 TRPV6Q9H1D0 765 aa18.68■□□□□ 0.58
PDGFA-201ENST00000354513 OSBPL3Q9H4L5 887 aa18.68■□□□□ 0.58
PDGFA-201ENST00000354513 IL23AQ9NPF7 189 aa18.68■□□□□ 0.58
PDGFA-201ENST00000354513 CXXC1Q9P0U4 656 aaPredicted RBP18.68■□□□□ 0.58
PDGFA-201ENST00000354513 WDR19Q8NEZ3 1342 aa18.68■□□□□ 0.58
PDGFA-201ENST00000354513 EDNRBP24530 442 aa18.67■□□□□ 0.58
PDGFA-201ENST00000354513 TMEM199Q8N511 208 aa18.67■□□□□ 0.58
PDGFA-201ENST00000354513 TRIP12Q14669 1992 aaPredicted RBP18.67■□□□□ 0.58
PDGFA-201ENST00000354513 LOC102724159A0A0B4J2E5 919 aa18.66■□□□□ 0.58
PDGFA-201ENST00000354513 PTPDC1A2A3K4 754 aa18.66■□□□□ 0.58
PDGFA-201ENST00000354513 GOLGA8HP0CJ92 632 aa18.66■□□□□ 0.58
PDGFA-201ENST00000354513 PCP11498 1178 aaKnown RBP18.66■□□□□ 0.58
PDGFA-201ENST00000354513 PWP2Q15269 919 aaKnown RBP18.66■□□□□ 0.58
PDGFA-201ENST00000354513 PSRC1Q6PGN9 363 aaPredicted RBP18.66■□□□□ 0.58
PDGFA-201ENST00000354513 MFSD6Q6ZSS7 791 aa18.66■□□□□ 0.58
PDGFA-201ENST00000354513 CHD1LQ86WJ1 897 aa18.66■□□□□ 0.58
PDGFA-201ENST00000354513 HERVK_113Q902F9 699 aa18.66■□□□□ 0.58
PDGFA-201ENST00000354513 TIFAQ96CG3 184 aa18.66■□□□□ 0.58
PDGFA-201ENST00000354513 TTC14Q96N46 770 aa18.66■□□□□ 0.58
PDGFA-201ENST00000354513 HIPK3Q9H422 1215 aa18.66■□□□□ 0.58
PDGFA-201ENST00000354513 ZNF576Q9H609 170 aa18.66■□□□□ 0.58
PDGFA-201ENST00000354513 ADD3Q9UEY8 706 aaKnown RBP18.66■□□□□ 0.58
PDGFA-201ENST00000354513 CALML3P27482 149 aa18.65■□□□□ 0.58
PDGFA-201ENST00000354513 RPS6P62753 249 aaKnown RBP18.65■□□□□ 0.58
PDGFA-201ENST00000354513 NUCB1Q02818 461 aa18.65■□□□□ 0.58
PDGFA-201ENST00000354513 RNF207Q6ZRF8 634 aa18.65■□□□□ 0.58
PDGFA-201ENST00000354513 TET1Q8NFU7 2136 aa18.65■□□□□ 0.58
PDGFA-201ENST00000354513 WDR11Q9BZH6 1224 aa18.65■□□□□ 0.58
PDGFA-201ENST00000354513 IL25Q9H293 177 aa18.65■□□□□ 0.58
PDGFA-201ENST00000354513 TRANK1O15050 2925 aa18.64■□□□□ 0.58
PDGFA-201ENST00000354513 COL4A4P53420 1690 aaPredicted RBP18.64■□□□□ 0.57
PDGFA-201ENST00000354513 CCL23P55773 120 aa18.64■□□□□ 0.57
PDGFA-201ENST00000354513 PURAQ00577 322 aaKnown RBP18.64■□□□□ 0.57
PDGFA-201ENST00000354513 PPP1R13LQ8WUF5 828 aa18.64■□□□□ 0.57
PDGFA-201ENST00000354513 COPS5Q92905 334 aa18.64■□□□□ 0.57
PDGFA-201ENST00000354513 ALDH8A1Q9H2A2 487 aaPredicted RBP18.64■□□□□ 0.57
PDGFA-201ENST00000354513 ARIH2O95376 493 aa18.63■□□□□ 0.57
PDGFA-201ENST00000354513 AAMPQ13685 434 aa18.63■□□□□ 0.57
PDGFA-201ENST00000354513 EXOC6Q8TAG9 804 aa18.63■□□□□ 0.57
PDGFA-201ENST00000354513 TBC1D5Q92609 795 aa18.63■□□□□ 0.57
PDGFA-201ENST00000354513 UBA5Q9GZZ9 404 aa18.63■□□□□ 0.57
PDGFA-201ENST00000354513 TRMT13Q9NUP7 481 aaKnown RBP18.63■□□□□ 0.57
PDGFA-201ENST00000354513 COL20A1Q9P218 1284 aa18.63■□□□□ 0.57
PDGFA-201ENST00000354513 DOCK5Q9H7D0 1870 aa18.62■□□□□ 0.57
PDGFA-201ENST00000354513 B4E1Z4 1266 aa18.62■□□□□ 0.57
PDGFA-201ENST00000354513 ZEB2O60315 1214 aa18.62■□□□□ 0.57
PDGFA-201ENST00000354513 KDM4AO75164 1064 aa18.62■□□□□ 0.57
PDGFA-201ENST00000354513 USH1GQ495M9 461 aa18.62■□□□□ 0.57
PDGFA-201ENST00000354513 CWC27Q6UX04 472 aaKnown RBP18.62■□□□□ 0.57
PDGFA-201ENST00000354513 DGKHQ86XP1 1220 aa18.62■□□□□ 0.57
PDGFA-201ENST00000354513 OR6J1Q8NGC5 347 aa18.62■□□□□ 0.57
PDGFA-201ENST00000354513 ANKS1AQ92625 1134 aa18.62■□□□□ 0.57
PDGFA-201ENST00000354513 ESR2Q92731 530 aa18.62■□□□□ 0.57
PDGFA-201ENST00000354513 SCLYQ96I15 445 aa18.62■□□□□ 0.57
PDGFA-201ENST00000354513 SEZ6LQ9BYH1 1024 aa18.62■□□□□ 0.57
PDGFA-201ENST00000354513 RNF41Q9H4P4 317 aaPredicted RBP18.62■□□□□ 0.57
PDGFA-201ENST00000354513 YBX2Q9Y2T7 364 aaKnown RBP18.62■□□□□ 0.57
PDGFA-201ENST00000354513 ZNF213O14771 459 aa18.61■□□□□ 0.57
PDGFA-201ENST00000354513 CYP2C9P11712 490 aa18.61■□□□□ 0.57
PDGFA-201ENST00000354513 GPATCH4Q5T3I0 446 aaKnown RBP18.61■□□□□ 0.57
PDGFA-201ENST00000354513 ENAHQ8N8S7 591 aaPredicted RBP18.61■□□□□ 0.57
PDGFA-201ENST00000354513 PNMA1Q8ND90 353 aa18.61■□□□□ 0.57
PDGFA-201ENST00000354513 DNERQ8NFT8 737 aa18.61■□□□□ 0.57
PDGFA-201ENST00000354513 RWDD1Q9H446 243 aaPredicted RBP18.61■□□□□ 0.57
PDGFA-201ENST00000354513 POLR3EQ9NVU0 708 aa18.61■□□□□ 0.57
PDGFA-201ENST00000354513 TNKSO95271 1327 aa18.6■□□□□ 0.57
PDGFA-201ENST00000354513 FGBP02675 491 aa18.6■□□□□ 0.57
PDGFA-201ENST00000354513 MYL3P08590 195 aa18.6■□□□□ 0.57
PDGFA-201ENST00000354513 MFAP1P55081 439 aaKnown RBP18.6■□□□□ 0.57
PDGFA-201ENST00000354513 PDE4DQ08499 809 aa18.6■□□□□ 0.57
PDGFA-201ENST00000354513 ADGRE1Q14246 886 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms