RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 IFT22Q9H7X7 185 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 RAD18Q9NS91 495 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 U3KQE9 123 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 SETBP1Q9Y6X0 1596 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 RNGTTO60942 597 aaKnown RBP2.13□□□□□ -2.07
BRCA1-202ENST00000354071 CAND2O75155 1236 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 SLITRK5O94991 958 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 YARSP54577 528 aaKnown RBP2.13□□□□□ -2.07
BRCA1-202ENST00000354071 ERVK-24P63145 666 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 MLECQ14165 292 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 BRD3Q15059 726 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 LLGL1Q15334 1064 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 DHCR24Q15392 516 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 RNF219Q5W0B1 726 aaPredicted RBP2.13□□□□□ -2.07
BRCA1-202ENST00000354071 NECAB2Q7Z6G3 386 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 DGKHQ86XP1 1220 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 HID1Q8IV36 788 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 FMR1NBQ8N0W7 255 aaPredicted RBP2.13□□□□□ -2.07
BRCA1-202ENST00000354071 ARMC10Q8N2F6 343 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 ARHGEF39Q8N4T4 335 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 GOLGA6L1Q8N7Z2 621 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 PTPRN2Q92932 1015 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 CCDC136Q96JN2 1154 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 CYP26B1Q9NR63 512 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 ADAM30Q9UKF2 790 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 ACTL7BQ9Y614 415 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 MAPKBP1O60336 1514 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 MYO15BQ96JP2 1530 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 PRR33A8MZF0 331 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 NBNO60934 754 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 ASLP04424 464 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 ADH5P11766 374 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 YY1P25490 414 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 ECE1P42892 770 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 CEBPAP49715 358 aaPredicted RBP2.13□□□□□ -2.07
BRCA1-202ENST00000354071 PDCD1Q15116 288 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 MSL1Q68DK7 614 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 SHISA2Q6UWI4 295 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 DYMQ7RTS9 669 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 SVIPQ8NHG7 77 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 FRS2Q8WU20 508 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 KREMEN1Q96MU8 473 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 IPO9Q96P70 1041 aaKnown RBP2.13□□□□□ -2.07
BRCA1-202ENST00000354071 TRERF1Q96PN7 1200 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 MIPEPQ99797 713 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 PHF20Q9BVI0 1012 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 TMPRSS13Q9BYE2 586 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 NKX2-4Q9H2Z4 354 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 SOX17Q9H6I2 414 aaPredicted RBP2.13□□□□□ -2.07
BRCA1-202ENST00000354071 TOPORSQ9NS56 1045 aaPredicted RBP2.13□□□□□ -2.07
BRCA1-202ENST00000354071 SAP30BPQ9UHR5 308 aaKnown RBP2.13□□□□□ -2.07
BRCA1-202ENST00000354071 FBXL21Q9UKT6 434 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 COMMD10Q9Y6G5 202 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 LAMB4A4D0S4 1761 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 A0A0A0MRY4 1105 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 FAM181BA6NEQ2 426 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 SH3BP5O60239 455 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 KRT37O76014 449 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 CKMP06732 381 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 CENPBP07199 599 aaPredicted RBP2.12□□□□□ -2.07
BRCA1-202ENST00000354071 CD68P34810 354 aaPredicted RBP2.12□□□□□ -2.07
BRCA1-202ENST00000354071 GABREP78334 506 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 CDK5R2Q13319 367 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 RALBP1Q15311 655 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 ATP13A4Q4VNC1 1196 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 COBLL1Q53SF7 1204 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 CCSAPQ6IQ19 270 aaPredicted RBP2.12□□□□□ -2.07
BRCA1-202ENST00000354071 KIAA1211Q6ZU35 1233 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 MTDHQ86UE4 582 aaKnown RBP2.12□□□□□ -2.07
BRCA1-202ENST00000354071 PASD1Q8IV76 773 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 C7orf61Q8IZ16 206 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 MAGEB10Q96LZ2 347 aaPredicted RBP2.12□□□□□ -2.07
BRCA1-202ENST00000354071 WHRNQ9P202 907 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 SERPINB13Q9UIV8 391 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 KAT6BQ8WYB5 2073 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 FAM177BA6PVY3 158 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 CBX4O00257 560 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 TGM5O43548 720 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 FBXO21O94952 628 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 RAB6AP20340 208 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 INF2Q27J81 1249 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 NOL9Q5SY16 702 aaKnown RBP2.12□□□□□ -2.07
BRCA1-202ENST00000354071 BROXQ5VW32 411 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 NXNQ6DKJ4 435 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 CYB5RLQ6IPT4 315 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 PGM2L1Q6PCE3 622 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 FAM214BQ7L5A3 538 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 TICAM2Q86XR7 235 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 WFDC8Q8IUA0 241 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 PPIL6Q8IXY8 311 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 SPICE1Q8N0Z3 855 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 E2F7Q96AV8 911 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 DHRS1Q96LJ7 313 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 GNL3LQ9NVN8 582 aaKnown RBP2.12□□□□□ -2.07
BRCA1-202ENST00000354071 CBLCQ9ULV8 474 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 PCDHGB6Q9Y5F9 930 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 LAMC3Q9Y6N6 1575 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 FANCGO15287 622 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 PMM2O15305 246 aa2.12□□□□□ -2.07
BRCA1-202ENST00000354071 LILRB5O75023 590 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms