RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 STXBP4Q6ZWJ1 553 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 TRMT44Q8IYL2 757 aaKnown RBP4.16□□□□□ -1.74
RNF38-203ENST00000353739 STAG2Q8N3U4 1231 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 LARP4BQ92615 738 aaKnown RBP4.16□□□□□ -1.74
RNF38-203ENST00000353739 RABGGTAQ92696 567 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 MKL1Q969V6 931 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 CEP63Q96MT8 703 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 PIGSQ96S52 555 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 NAPGQ99747 312 aaPredicted RBP4.16□□□□□ -1.74
RNF38-203ENST00000353739 HAUS4Q9H6D7 363 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 GOPCQ9HD26 462 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 ABHD10Q9NUJ1 306 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 CAPN11Q9UMQ6 739 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 UBE4BO95155 1302 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 ATP8B3O60423 1300 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 USP27XA6NNY8 438 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 TMEM232C9JQI7 657 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 KRT86O43790 486 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 EIF3JO75822 258 aaKnown RBP4.16□□□□□ -1.74
RNF38-203ENST00000353739 URI1O94763 535 aaPredicted RBP4.16□□□□□ -1.74
RNF38-203ENST00000353739 BMP6P22004 513 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 GABPAQ06546 454 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 SPA17Q15506 151 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 MAP9Q49MG5 647 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 TMEM119Q4V9L6 283 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 VWA3BQ502W6 1294 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 HYIQ5T013 277 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 GRAMD1CQ8IYS0 662 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 CSGALNACT2Q8N6G5 542 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 OR8K1Q8NGG5 319 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 TBCKQ8TEA7 893 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 PCMTD1Q96MG8 357 aaPredicted RBP4.16□□□□□ -1.74
RNF38-203ENST00000353739 DNAJC7Q99615 494 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 IDI2Q9BXS1 227 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 ARHGEF10LQ9HCE6 1279 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 GINM1Q9NU53 330 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 PI4KBQ9UBF8 816 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 POLLQ9UGP5 575 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 DDX25Q9UHL0 483 aaKnown RBP4.16□□□□□ -1.74
RNF38-203ENST00000353739 FAM184BQ9ULE4 1060 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 MRFAP1Q9Y605 127 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 TAF1P21675 1872 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 ANKRD31Q8N7Z5 1873 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 ARFGEF1Q9Y6D6 1849 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 A0A087X0B3 334 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 FAM205CA6NFA0 338 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 MPHOSPH10O00566 681 aaKnown RBP4.16□□□□□ -1.74
RNF38-203ENST00000353739 SRGNP10124 158 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 PLCG1P19174 1290 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 ANXA13P27216 316 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 CRKP46108 304 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 KARSQ15046 597 aaKnown RBP4.16□□□□□ -1.74
RNF38-203ENST00000353739 EARS2Q5JPH6 523 aaKnown RBP4.16□□□□□ -1.74
RNF38-203ENST00000353739 TAF3Q5VWG9 929 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 TMEM139Q8IV31 216 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 ZNF710Q8N1W2 664 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 GUF1Q8N442 669 aaKnown RBP4.16□□□□□ -1.74
RNF38-203ENST00000353739 SAMD3Q8N6K7 520 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 PKNOX2Q96KN3 472 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 CALR3Q96L12 384 aaKnown RBP4.16□□□□□ -1.74
RNF38-203ENST00000353739 BLZF1Q9H2G9 400 aa4.16□□□□□ -1.74
RNF38-203ENST00000353739 COL11A2P13942 1736 aaPredicted RBP4.15□□□□□ -1.74
RNF38-203ENST00000353739 KAT6BQ8WYB5 2073 aa4.15□□□□□ -1.74
RNF38-203ENST00000353739 CYP3A7-CYP3A51PA0A087WV96 503 aa4.15□□□□□ -1.74
RNF38-203ENST00000353739 USP17L5A8MUK1 530 aa4.15□□□□□ -1.74
RNF38-203ENST00000353739 UBE2Q2LH0YL09 131 aa4.15□□□□□ -1.74
RNF38-203ENST00000353739 CALUO43852 315 aaPredicted RBP4.15□□□□□ -1.74
RNF38-203ENST00000353739 CYP3A7P24462 503 aa4.15□□□□□ -1.74
RNF38-203ENST00000353739 PRCPP42785 496 aa4.15□□□□□ -1.74
RNF38-203ENST00000353739 ZBED6P86452 979 aa4.15□□□□□ -1.74
RNF38-203ENST00000353739 PICALMQ13492 652 aa4.15□□□□□ -1.74
RNF38-203ENST00000353739 MAN2A1Q16706 1144 aa4.15□□□□□ -1.74
RNF38-203ENST00000353739 TXNRD1Q16881 649 aa4.15□□□□□ -1.74
RNF38-203ENST00000353739 Q4G0T1 1027 aa4.15□□□□□ -1.74
RNF38-203ENST00000353739 TXNRD3Q86VQ6 643 aa4.15□□□□□ -1.74
RNF38-203ENST00000353739 GOLGA6L1Q8N7Z2 621 aa4.15□□□□□ -1.74
RNF38-203ENST00000353739 MTMR8Q96EF0 704 aa4.15□□□□□ -1.74
RNF38-203ENST00000353739 GMCL1Q96IK5 515 aa4.15□□□□□ -1.74
RNF38-203ENST00000353739 ALS2CR12Q96Q35 445 aa4.15□□□□□ -1.74
RNF38-203ENST00000353739 MTMR9Q96QG7 549 aa4.15□□□□□ -1.74
RNF38-203ENST00000353739 PITPNM2Q9BZ72 1349 aa4.15□□□□□ -1.75
RNF38-203ENST00000353739 hCG_1642624A0A1W2PR95 340 aa4.15□□□□□ -1.75
RNF38-203ENST00000353739 ANO9A1A5B4 782 aa4.15□□□□□ -1.75
RNF38-203ENST00000353739 CD44P16070 742 aaKnown RBP4.15□□□□□ -1.75
RNF38-203ENST00000353739 MAP3K9P80192 1104 aa4.15□□□□□ -1.75
RNF38-203ENST00000353739 IL17AQ16552 155 aa4.15□□□□□ -1.75
RNF38-203ENST00000353739 ZNF827Q17R98 1081 aa4.15□□□□□ -1.75
RNF38-203ENST00000353739 RBM26Q5T8P6 1007 aaKnown RBP4.15□□□□□ -1.75
RNF38-203ENST00000353739 KIAA1328Q86T90 577 aa4.15□□□□□ -1.75
RNF38-203ENST00000353739 MSL3Q8N5Y2 521 aaKnown RBP4.15□□□□□ -1.75
RNF38-203ENST00000353739 SNX29Q8TEQ0 813 aa4.15□□□□□ -1.75
RNF38-203ENST00000353739 SYN2Q92777 582 aaPredicted RBP4.15□□□□□ -1.75
RNF38-203ENST00000353739 AKT1S1Q96B36 256 aa4.15□□□□□ -1.75
RNF38-203ENST00000353739 SHISA4Q96DD7 197 aa4.15□□□□□ -1.75
RNF38-203ENST00000353739 NOC4LQ9BVI4 516 aaKnown RBP4.15□□□□□ -1.75
RNF38-203ENST00000353739 TRIM9Q9C026 710 aa4.15□□□□□ -1.75
RNF38-203ENST00000353739 PSTPIP2Q9H939 334 aa4.15□□□□□ -1.75
RNF38-203ENST00000353739 INTS13Q9NVM9 706 aa4.15□□□□□ -1.75
RNF38-203ENST00000353739 HERC5Q9UII4 1024 aaKnown RBP4.15□□□□□ -1.75
RNF38-203ENST00000353739 ADGRG1Q9Y653 693 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms