RNA–Protein interactions for RNA: ENST00000353487.6

SPPL3-201, Transcript of signal peptide peptidase like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL3, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-201ENST00000353487 AATFQ9NY61 560 aaKnown RBP eCLIP15.78■□□□□ 0.12
SPPL3-201ENST00000353487 GYPCP04921 128 aa15.78■□□□□ 0.12
SPPL3-201ENST00000353487 EEF2P13639 858 aaKnown RBP15.78■□□□□ 0.12
SPPL3-201ENST00000353487 GJC1P36383 396 aa15.78■□□□□ 0.12
SPPL3-201ENST00000353487 SLCO1A2P46721 670 aa15.78■□□□□ 0.12
SPPL3-201ENST00000353487 APBA1Q02410 837 aa15.78■□□□□ 0.12
SPPL3-201ENST00000353487 TMEM266Q2M3C6 531 aa15.78■□□□□ 0.12
SPPL3-201ENST00000353487 TCP11X2Q5H9J9 407 aa15.78■□□□□ 0.12
SPPL3-201ENST00000353487 USPL1Q5W0Q7 1092 aa15.78■□□□□ 0.12
SPPL3-201ENST00000353487 SYCP3Q8IZU3 236 aa15.78■□□□□ 0.12
SPPL3-201ENST00000353487 HNRNPLLQ8WVV9 542 aaKnown RBP15.78■□□□□ 0.12
SPPL3-201ENST00000353487 RRP36Q96EU6 259 aaKnown RBP15.78■□□□□ 0.12
SPPL3-201ENST00000353487 TMOD3Q9NYL9 352 aa15.78■□□□□ 0.12
SPPL3-201ENST00000353487 MED23Q9ULK4 1368 aa15.78■□□□□ 0.12
SPPL3-201ENST00000353487 MAP2P11137 1827 aaKnown RBP15.77■□□□□ 0.12
SPPL3-201ENST00000353487 EIF3HO15372 352 aaKnown RBP eCLIP15.77■□□□□ 0.12
SPPL3-201ENST00000353487 ITGA6P23229 1130 aa15.77■□□□□ 0.12
SPPL3-201ENST00000353487 NELFCDQ8IXH7 590 aa15.77■□□□□ 0.12
SPPL3-201ENST00000353487 KLHL14Q9P2G3 628 aa15.77■□□□□ 0.12
SPPL3-201ENST00000353487 KCNG1Q9UIX4 513 aa15.77■□□□□ 0.12
SPPL3-201ENST00000353487 PRKAB2O43741 272 aa15.77■□□□□ 0.12
SPPL3-201ENST00000353487 PDE6AP16499 860 aa15.77■□□□□ 0.12
SPPL3-201ENST00000353487 SLC9C1Q4G0N8 1177 aa15.77■□□□□ 0.12
SPPL3-201ENST00000353487 ZC3H18Q86VM9 953 aaKnown RBP15.77■□□□□ 0.12
SPPL3-201ENST00000353487 TBC1D10CQ8IV04 446 aa15.77■□□□□ 0.12
SPPL3-201ENST00000353487 IFNL3Q8IZI9 196 aa15.77■□□□□ 0.12
SPPL3-201ENST00000353487 NSMCE1Q8WV22 266 aa15.77■□□□□ 0.12
SPPL3-201ENST00000353487 ZMAT2Q96NC0 199 aaKnown RBP15.77■□□□□ 0.12
SPPL3-201ENST00000353487 STMN4Q9H169 189 aaPredicted RBP15.77■□□□□ 0.12
SPPL3-201ENST00000353487 ACTR5Q9H9F9 607 aaPredicted RBP15.77■□□□□ 0.12
SPPL3-201ENST00000353487 SH2B2O14492 632 aaPredicted RBP15.77■□□□□ 0.11
SPPL3-201ENST00000353487 DESP17661 470 aa15.77■□□□□ 0.11
SPPL3-201ENST00000353487 EIF4A3P38919 411 aaKnown RBP15.77■□□□□ 0.11
SPPL3-201ENST00000353487 RASGRP2Q7LDG7 609 aa15.77■□□□□ 0.11
SPPL3-201ENST00000353487 HVCN1Q96D96 273 aa15.77■□□□□ 0.11
SPPL3-201ENST00000353487 CNOT6LQ96LI5 555 aaKnown RBP15.77■□□□□ 0.11
SPPL3-201ENST00000353487 SRPRBQ9Y5M8 271 aaKnown RBP15.77■□□□□ 0.11
SPPL3-201ENST00000353487 PLEKHG2Q9H7P9 1386 aa15.77■□□□□ 0.11
SPPL3-201ENST00000353487 STX2P32856 288 aa15.76■□□□□ 0.11
SPPL3-201ENST00000353487 TXKP42681 527 aa15.76■□□□□ 0.11
SPPL3-201ENST00000353487 DEUP1Q05D60 604 aa15.76■□□□□ 0.11
SPPL3-201ENST00000353487 CCDC174Q6PII3 467 aa15.76■□□□□ 0.11
SPPL3-201ENST00000353487 INTS9Q9NV88 658 aaKnown RBP15.76■□□□□ 0.11
SPPL3-201ENST00000353487 IFT172Q9UG01 1749 aa15.76■□□□□ 0.11
SPPL3-201ENST00000353487 TCEAL9Q9UHQ7 104 aa15.76■□□□□ 0.11
SPPL3-201ENST00000353487 USP42Q9H9J4 1324 aaKnown RBP15.76■□□□□ 0.11
SPPL3-201ENST00000353487 A0A1B0GTH6 734 aa15.76■□□□□ 0.11
SPPL3-201ENST00000353487 GTPBP6O43824 516 aaPredicted RBP15.76■□□□□ 0.11
SPPL3-201ENST00000353487 NAPAP54920 295 aa15.76■□□□□ 0.11
SPPL3-201ENST00000353487 KLHL30Q0D2K2 578 aa15.76■□□□□ 0.11
SPPL3-201ENST00000353487 LLGL1Q15334 1064 aa15.76■□□□□ 0.11
SPPL3-201ENST00000353487 DCAF17Q5H9S7 520 aaPredicted RBP15.76■□□□□ 0.11
SPPL3-201ENST00000353487 ZNF449Q6P9G9 518 aa15.76■□□□□ 0.11
SPPL3-201ENST00000353487 ZNF444Q8N0Y2 327 aaPredicted RBP15.76■□□□□ 0.11
SPPL3-201ENST00000353487 KCNB2Q92953 911 aa15.76■□□□□ 0.11
SPPL3-201ENST00000353487 TMEM165Q9HC07 324 aa15.76■□□□□ 0.11
SPPL3-201ENST00000353487 MTRF1LQ9UGC7 380 aaKnown RBP15.76■□□□□ 0.11
SPPL3-201ENST00000353487 STARD3NLO95772 234 aa15.76■□□□□ 0.11
SPPL3-201ENST00000353487 EZH2Q15910 746 aaKnown RBP15.76■□□□□ 0.11
SPPL3-201ENST00000353487 FAM47AQ5JRC9 791 aa15.76■□□□□ 0.11
SPPL3-201ENST00000353487 CCNI2Q6ZMN8 369 aaPredicted RBP15.76■□□□□ 0.11
SPPL3-201ENST00000353487 KIFC2Q96AC6 838 aa15.76■□□□□ 0.11
SPPL3-201ENST00000353487 ARL8AQ96BM9 186 aa15.76■□□□□ 0.11
SPPL3-201ENST00000353487 CCDC77Q9BR77 488 aa15.76■□□□□ 0.11
SPPL3-201ENST00000353487 PACSIN2Q9UNF0 486 aaPredicted RBP15.76■□□□□ 0.11
SPPL3-201ENST00000353487 NBPF5PQ86XG9 351 aaPredicted RBP15.75■□□□□ 0.11
SPPL3-201ENST00000353487 SCYL3Q8IZE3 742 aa15.75■□□□□ 0.11
SPPL3-201ENST00000353487 CFAP61Q8NHU2 1237 aa15.75■□□□□ 0.11
SPPL3-201ENST00000353487 TEX13AQ9BXU3 409 aaPredicted RBP15.75■□□□□ 0.11
SPPL3-201ENST00000353487 DUSP10Q9Y6W6 482 aa15.75■□□□□ 0.11
SPPL3-201ENST00000353487 NEURL4Q96JN8 1562 aa15.75■□□□□ 0.11
SPPL3-201ENST00000353487 ABL1P00519 1130 aa15.75■□□□□ 0.11
SPPL3-201ENST00000353487 UAP1Q16222 522 aaPredicted RBP15.75■□□□□ 0.11
SPPL3-201ENST00000353487 GPKOWQ92917 476 aaPredicted RBP eCLIP15.75■□□□□ 0.11
SPPL3-201ENST00000353487 IQCGQ9H095 443 aaKnown RBP15.75■□□□□ 0.11
SPPL3-201ENST00000353487 ADD3Q9UEY8 706 aaKnown RBP15.75■□□□□ 0.11
SPPL3-201ENST00000353487 PLAAQ9Y263 795 aa15.75■□□□□ 0.11
SPPL3-201ENST00000353487 TNKSO95271 1327 aa15.75■□□□□ 0.11
SPPL3-201ENST00000353487 IFI16Q16666 785 aaKnown RBP15.75■□□□□ 0.11
SPPL3-201ENST00000353487 MAEAQ7L5Y9 396 aa15.75■□□□□ 0.11
SPPL3-201ENST00000353487 MB21D1Q8N884 522 aa15.75■□□□□ 0.11
SPPL3-201ENST00000353487 AP1M1Q9BXS5 423 aa15.75■□□□□ 0.11
SPPL3-201ENST00000353487 MAGEB6P1A0A0J9YX57 407 aa15.74■□□□□ 0.11
SPPL3-201ENST00000353487 MAP2K7O14733 419 aa15.74■□□□□ 0.11
SPPL3-201ENST00000353487 PDHBP11177 359 aa15.74■□□□□ 0.11
SPPL3-201ENST00000353487 ERVK-24P63145 666 aa15.74■□□□□ 0.11
SPPL3-201ENST00000353487 CALCOCO2Q13137 446 aa15.74■□□□□ 0.11
SPPL3-201ENST00000353487 NLRP14Q86W24 1093 aa15.74■□□□□ 0.11
SPPL3-201ENST00000353487 DZIP3Q86Y13 1208 aaKnown RBP15.74■□□□□ 0.11
SPPL3-201ENST00000353487 MB21D2Q8IYB1 491 aaPredicted RBP15.74■□□□□ 0.11
SPPL3-201ENST00000353487 CCDC26Q8TAB7 109 aa15.74■□□□□ 0.11
SPPL3-201ENST00000353487 SLC52A2Q9HAB3 445 aa15.74■□□□□ 0.11
SPPL3-201ENST00000353487 ATP8A1Q9Y2Q0 1164 aa15.74■□□□□ 0.11
SPPL3-201ENST00000353487 PLEKHG1Q9ULL1 1385 aa15.74■□□□□ 0.11
SPPL3-201ENST00000353487 KRIT1O00522 736 aa15.74■□□□□ 0.11
SPPL3-201ENST00000353487 FMNL1O95466 1100 aaPredicted RBP15.74■□□□□ 0.11
SPPL3-201ENST00000353487 PHKA1P46020 1223 aa15.74■□□□□ 0.11
SPPL3-201ENST00000353487 CUL3Q13618 768 aa15.74■□□□□ 0.11
SPPL3-201ENST00000353487 MS4A14Q96JA4 679 aa15.74■□□□□ 0.11
SPPL3-201ENST00000353487 RAB34Q9BZG1 259 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms