RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 ZNF219Q9P2Y4 722 aaPredicted RBP18.59■□□□□ 0.57
PDAP1-201ENST00000350498 VSNL1P62760 191 aa18.59■□□□□ 0.57
PDAP1-201ENST00000350498 BEND6Q5SZJ8 279 aaPredicted RBP18.59■□□□□ 0.57
PDAP1-201ENST00000350498 SOGA3Q5TF21 947 aa18.59■□□□□ 0.57
PDAP1-201ENST00000350498 TTI2Q6NXR4 508 aa18.59■□□□□ 0.57
PDAP1-201ENST00000350498 DYMQ7RTS9 669 aa18.59■□□□□ 0.57
PDAP1-201ENST00000350498 GIMAP8Q8ND71 665 aaPredicted RBP18.59■□□□□ 0.57
PDAP1-201ENST00000350498 SLC39A2Q9NP94 309 aa18.59■□□□□ 0.57
PDAP1-201ENST00000350498 RMND1Q9NWS8 449 aa18.59■□□□□ 0.57
PDAP1-201ENST00000350498 PODXL2Q9NZ53 605 aa18.59■□□□□ 0.57
PDAP1-201ENST00000350498 REXO2Q9Y3B8 237 aaKnown RBP18.59■□□□□ 0.57
PDAP1-201ENST00000350498 CTAGE9A4FU28 777 aa18.58■□□□□ 0.57
PDAP1-201ENST00000350498 ASIC1P78348 528 aa18.58■□□□□ 0.57
PDAP1-201ENST00000350498 KCNK18Q7Z418 384 aa18.58■□□□□ 0.57
PDAP1-201ENST00000350498 CNGA4Q8IV77 575 aa18.58■□□□□ 0.57
PDAP1-201ENST00000350498 REXO1Q8N1G1 1221 aaKnown RBP18.58■□□□□ 0.57
PDAP1-201ENST00000350498 FAM163AQ96GL9 167 aaPredicted RBP18.58■□□□□ 0.57
PDAP1-201ENST00000350498 AGPAT5Q9NUQ2 364 aa18.58■□□□□ 0.57
PDAP1-201ENST00000350498 USP40Q9NVE5 1235 aa18.58■□□□□ 0.57
PDAP1-201ENST00000350498 GUCA1BQ9UMX6 200 aa18.58■□□□□ 0.57
PDAP1-201ENST00000350498 RASSF10A6NK89 507 aa18.58■□□□□ 0.56
PDAP1-201ENST00000350498 MPHOSPH10O00566 681 aaKnown RBP18.58■□□□□ 0.56
PDAP1-201ENST00000350498 RHOBTB3O94955 611 aa18.58■□□□□ 0.56
PDAP1-201ENST00000350498 TAL1P17542 331 aaPredicted RBP18.58■□□□□ 0.56
PDAP1-201ENST00000350498 GABPAQ06546 454 aa18.58■□□□□ 0.56
PDAP1-201ENST00000350498 TCP10Q12799 353 aa18.58■□□□□ 0.56
PDAP1-201ENST00000350498 KRT25Q7Z3Z0 450 aa18.58■□□□□ 0.56
PDAP1-201ENST00000350498 MB21D1Q8N884 522 aa18.58■□□□□ 0.56
PDAP1-201ENST00000350498 RIOX1Q9H6W3 641 aa18.58■□□□□ 0.56
PDAP1-201ENST00000350498 CCDC151A5D8V7 595 aa18.57■□□□□ 0.56
PDAP1-201ENST00000350498 HOXA10P31260 410 aaPredicted RBP18.57■□□□□ 0.56
PDAP1-201ENST00000350498 HSPA1LP34931 641 aa18.57■□□□□ 0.56
PDAP1-201ENST00000350498 IRX5P78411 483 aaPredicted RBP18.57■□□□□ 0.56
PDAP1-201ENST00000350498 ECM1Q16610 540 aa18.57■□□□□ 0.56
PDAP1-201ENST00000350498 KIAA0895Q8NCT3 520 aa18.57■□□□□ 0.56
PDAP1-201ENST00000350498 HINFPQ9BQA5 517 aa18.57■□□□□ 0.56
PDAP1-201ENST00000350498 NAA15Q9BXJ9 866 aaKnown RBP18.57■□□□□ 0.56
PDAP1-201ENST00000350498 ZNF287Q9HBT7 754 aa18.57■□□□□ 0.56
PDAP1-201ENST00000350498 SRCAPQ6ZRS2 3230 aa18.57■□□□□ 0.56
PDAP1-201ENST00000350498 SRGAP2O75044 1071 aa18.57■□□□□ 0.56
PDAP1-201ENST00000350498 PHACTR2O75167 634 aa18.57■□□□□ 0.56
PDAP1-201ENST00000350498 SNAP25P60880 206 aa18.57■□□□□ 0.56
PDAP1-201ENST00000350498 GRB10Q13322 594 aa18.57■□□□□ 0.56
PDAP1-201ENST00000350498 MSL1Q68DK7 614 aa18.57■□□□□ 0.56
PDAP1-201ENST00000350498 DBNDD1Q9H9R9 158 aa18.57■□□□□ 0.56
PDAP1-201ENST00000350498 ADAM21Q9UKJ8 722 aa18.57■□□□□ 0.56
PDAP1-201ENST00000350498 H7C1D1 291 aa18.56■□□□□ 0.56
PDAP1-201ENST00000350498 MAP2K7O14733 419 aa18.56■□□□□ 0.56
PDAP1-201ENST00000350498 ADRA2BP18089 450 aa18.56■□□□□ 0.56
PDAP1-201ENST00000350498 TNNI2P48788 182 aa18.56■□□□□ 0.56
PDAP1-201ENST00000350498 GALNT17Q6IS24 598 aa18.56■□□□□ 0.56
PDAP1-201ENST00000350498 TMED8Q6PL24 325 aaPredicted RBP18.56■□□□□ 0.56
PDAP1-201ENST00000350498 ADGRF4Q8IZF3 695 aa18.56■□□□□ 0.56
PDAP1-201ENST00000350498 CSGALNACT2Q8N6G5 542 aa18.56■□□□□ 0.56
PDAP1-201ENST00000350498 ZNF507Q8TCN5 953 aa18.56■□□□□ 0.56
PDAP1-201ENST00000350498 PNMA5Q96PV4 448 aa18.56■□□□□ 0.56
PDAP1-201ENST00000350498 LZTS2Q9BRK4 669 aa18.56■□□□□ 0.56
PDAP1-201ENST00000350498 JMJD4Q9H9V9 463 aa18.56■□□□□ 0.56
PDAP1-201ENST00000350498 BLOC1S4Q9NUP1 217 aa18.56■□□□□ 0.56
PDAP1-201ENST00000350498 USP17L10C9JJH3 530 aa18.56■□□□□ 0.56
PDAP1-201ENST00000350498 ATP8B1O43520 1251 aa18.56■□□□□ 0.56
PDAP1-201ENST00000350498 CAPN2P17655 700 aa18.56■□□□□ 0.56
PDAP1-201ENST00000350498 GNA11P29992 359 aa18.56■□□□□ 0.56
PDAP1-201ENST00000350498 LMAN1P49257 510 aa18.56■□□□□ 0.56
PDAP1-201ENST00000350498 TAF3Q5VWG9 929 aa18.56■□□□□ 0.56
PDAP1-201ENST00000350498 WDR59Q6PJI9 974 aa18.56■□□□□ 0.56
PDAP1-201ENST00000350498 ITIH6Q6UXX5 1313 aa18.56■□□□□ 0.56
PDAP1-201ENST00000350498 MYMKA6NI61 221 aa18.55■□□□□ 0.56
PDAP1-201ENST00000350498 ONECUT3O60422 494 aaPredicted RBP18.55■□□□□ 0.56
PDAP1-201ENST00000350498 PLCG2P16885 1265 aa18.55■□□□□ 0.56
PDAP1-201ENST00000350498 SHMT1P34896 483 aa18.55■□□□□ 0.56
PDAP1-201ENST00000350498 PRPHP41219 470 aa18.55■□□□□ 0.56
PDAP1-201ENST00000350498 KCNB1Q14721 858 aa18.55■□□□□ 0.56
PDAP1-201ENST00000350498 LRRC41Q15345 812 aa18.55■□□□□ 0.56
PDAP1-201ENST00000350498 CDC42EP5Q6NZY7 148 aa18.55■□□□□ 0.56
PDAP1-201ENST00000350498 NAPGQ99747 312 aaPredicted RBP18.55■□□□□ 0.56
PDAP1-201ENST00000350498 PYM1Q9BRP8 204 aaKnown RBP18.55■□□□□ 0.56
PDAP1-201ENST00000350498 QTRT2Q9H974 415 aaKnown RBP18.55■□□□□ 0.56
PDAP1-201ENST00000350498 VPS18Q9P253 973 aa18.55■□□□□ 0.56
PDAP1-201ENST00000350498 MTMR9Q96QG7 549 aa18.55■□□□□ 0.56
PDAP1-201ENST00000350498 CRAMP1Q96RY5 1269 aa18.55■□□□□ 0.56
PDAP1-201ENST00000350498 ZC3H12CQ9C0D7 883 aaKnown RBP18.55■□□□□ 0.56
PDAP1-201ENST00000350498 SEMA6BQ9H3T3 888 aa18.55■□□□□ 0.56
PDAP1-201ENST00000350498 CALCOCO1Q9P1Z2 691 aa18.55■□□□□ 0.56
PDAP1-201ENST00000350498 NOVP48745 357 aa18.54■□□□□ 0.56
PDAP1-201ENST00000350498 MAPK8IP2Q13387 824 aaPredicted RBP18.54■□□□□ 0.56
PDAP1-201ENST00000350498 CALCRLQ16602 461 aa18.54■□□□□ 0.56
PDAP1-201ENST00000350498 SPATA31A6Q5VVP1 1343 aa18.54■□□□□ 0.56
PDAP1-201ENST00000350498 CEP112Q8N8E3 955 aa18.54■□□□□ 0.56
PDAP1-201ENST00000350498 GDAP1L1Q96MZ0 367 aa18.54■□□□□ 0.56
PDAP1-201ENST00000350498 TUBGCP2Q9BSJ2 902 aa18.54■□□□□ 0.56
PDAP1-201ENST00000350498 LGALS16A8MUM7 142 aa18.54■□□□□ 0.56
PDAP1-201ENST00000350498 PSMA7O14818 248 aa18.54■□□□□ 0.56
PDAP1-201ENST00000350498 CYP26C1Q6V0L0 522 aa18.54■□□□□ 0.56
PDAP1-201ENST00000350498 TMTC1Q8IUR5 882 aa18.54■□□□□ 0.56
PDAP1-201ENST00000350498 KIAA0825Q8IV33 1275 aa18.54■□□□□ 0.56
PDAP1-201ENST00000350498 SP8Q8IXZ3 490 aa18.54■□□□□ 0.56
PDAP1-201ENST00000350498 TBC1D22AQ8WUA7 517 aa18.54■□□□□ 0.56
PDAP1-201ENST00000350498 DNAJC18Q9H819 358 aa18.54■□□□□ 0.56
PDAP1-201ENST00000350498 EXOC1Q9NV70 894 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms