RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 LRRC10BA6NIK2 292 aa22.89■■□□□ 1.26
CHRNA3-202ENST00000348639 KIF2AO00139 706 aaPredicted RBP22.89■■□□□ 1.26
CHRNA3-202ENST00000348639 SPAG1Q07617 926 aa22.89■■□□□ 1.26
CHRNA3-202ENST00000348639 RBM26Q5T8P6 1007 aaKnown RBP22.89■■□□□ 1.26
CHRNA3-202ENST00000348639 GMLQ99445 158 aa22.89■■□□□ 1.26
CHRNA3-202ENST00000348639 C7orf25Q9BPX7 421 aa22.89■■□□□ 1.26
CHRNA3-202ENST00000348639 RAB34Q9BZG1 259 aa22.89■■□□□ 1.26
CHRNA3-202ENST00000348639 LIMA1Q9UHB6 759 aaKnown RBP22.89■■□□□ 1.26
CHRNA3-202ENST00000348639 TEX33O43247 280 aa22.89■■□□□ 1.25
CHRNA3-202ENST00000348639 GH2P01242 217 aa22.89■■□□□ 1.25
CHRNA3-202ENST00000348639 PBX1P40424 430 aa22.89■■□□□ 1.25
CHRNA3-202ENST00000348639 AMPD3Q01432 767 aa22.89■■□□□ 1.25
CHRNA3-202ENST00000348639 GOLGA8FQ08AF8 430 aa22.89■■□□□ 1.25
CHRNA3-202ENST00000348639 GOLGA8DPQ0D2H9 430 aa22.89■■□□□ 1.25
CHRNA3-202ENST00000348639 CDC37Q16543 378 aaPredicted RBP22.89■■□□□ 1.25
CHRNA3-202ENST00000348639 TMEM139Q8IV31 216 aa22.89■■□□□ 1.25
CHRNA3-202ENST00000348639 TC2NQ8N9U0 490 aa22.89■■□□□ 1.25
CHRNA3-202ENST00000348639 GIMAP8Q8ND71 665 aaPredicted RBP22.89■■□□□ 1.25
CHRNA3-202ENST00000348639 PPP1R13BQ96KQ4 1090 aa22.89■■□□□ 1.25
CHRNA3-202ENST00000348639 TRIM9Q9C026 710 aa22.89■■□□□ 1.25
CHRNA3-202ENST00000348639 HERC5Q9UII4 1024 aaKnown RBP22.89■■□□□ 1.25
CHRNA3-202ENST00000348639 PCDHA1Q9Y5I3 950 aa22.89■■□□□ 1.25
CHRNA3-202ENST00000348639 CCP110O43303 1012 aa22.88■■□□□ 1.25
CHRNA3-202ENST00000348639 GCFC2P16383 781 aaKnown RBP22.88■■□□□ 1.25
CHRNA3-202ENST00000348639 NIM1KQ8IY84 436 aa22.88■■□□□ 1.25
CHRNA3-202ENST00000348639 NAP1L4Q99733 375 aaKnown RBP22.88■■□□□ 1.25
CHRNA3-202ENST00000348639 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.88■■□□□ 1.25
CHRNA3-202ENST00000348639 H7C1D1 291 aa22.87■■□□□ 1.25
CHRNA3-202ENST00000348639 COBLO75128 1261 aa22.87■■□□□ 1.25
CHRNA3-202ENST00000348639 JAG1P78504 1218 aa22.87■■□□□ 1.25
CHRNA3-202ENST00000348639 STIM1Q13586 685 aa22.87■■□□□ 1.25
CHRNA3-202ENST00000348639 FCHSD1Q86WN1 690 aa22.87■■□□□ 1.25
CHRNA3-202ENST00000348639 CCDC47Q96A33 483 aaKnown RBP22.87■■□□□ 1.25
CHRNA3-202ENST00000348639 ZNF70Q9UC06 446 aaPredicted RBP22.87■■□□□ 1.25
CHRNA3-202ENST00000348639 STK17AQ9UEE5 414 aa22.87■■□□□ 1.25
CHRNA3-202ENST00000348639 SYNPO2Q9UMS6 1093 aa22.87■■□□□ 1.25
CHRNA3-202ENST00000348639 MAPK8IP1Q9UQF2 711 aa22.87■■□□□ 1.25
CHRNA3-202ENST00000348639 ARHGAP6O43182 974 aa22.87■■□□□ 1.25
CHRNA3-202ENST00000348639 NDUFB10O96000 172 aa22.87■■□□□ 1.25
CHRNA3-202ENST00000348639 CCDC125Q86Z20 511 aa22.87■■□□□ 1.25
CHRNA3-202ENST00000348639 GTPBP4Q9BZE4 634 aaKnown RBP22.87■■□□□ 1.25
CHRNA3-202ENST00000348639 VPS33BQ9H267 617 aa22.87■■□□□ 1.25
CHRNA3-202ENST00000348639 PIM2Q9P1W9 311 aa22.87■■□□□ 1.25
CHRNA3-202ENST00000348639 DDX25Q9UHL0 483 aaKnown RBP22.87■■□□□ 1.25
CHRNA3-202ENST00000348639 ZNRF3Q9ULT6 936 aa22.87■■□□□ 1.25
CHRNA3-202ENST00000348639 STX10O60499 249 aa22.86■■□□□ 1.25
CHRNA3-202ENST00000348639 GRB10Q13322 594 aa22.86■■□□□ 1.25
CHRNA3-202ENST00000348639 RRP1BQ14684 758 aaKnown RBP22.86■■□□□ 1.25
CHRNA3-202ENST00000348639 KRT31Q15323 416 aa22.86■■□□□ 1.25
CHRNA3-202ENST00000348639 NUP88Q99567 741 aaPredicted RBP22.86■■□□□ 1.25
CHRNA3-202ENST00000348639 BAG1Q99933 345 aaPredicted RBP22.86■■□□□ 1.25
CHRNA3-202ENST00000348639 VEZTQ9HBM0 779 aa22.86■■□□□ 1.25
CHRNA3-202ENST00000348639 PSMA7O14818 248 aa22.86■■□□□ 1.25
CHRNA3-202ENST00000348639 ADKP55263 362 aaKnown RBP22.86■■□□□ 1.25
CHRNA3-202ENST00000348639 TCP11X2Q5H9J9 407 aa22.86■■□□□ 1.25
CHRNA3-202ENST00000348639 ANKRD20A12PQ8NF67 263 aa22.86■■□□□ 1.25
CHRNA3-202ENST00000348639 PPP1R1BQ9UD71 204 aaPredicted RBP22.86■■□□□ 1.25
CHRNA3-202ENST00000348639 IKQ13123 557 aaPredicted RBP22.85■■□□□ 1.25
CHRNA3-202ENST00000348639 FAM151AQ8WW52 585 aa22.85■■□□□ 1.25
CHRNA3-202ENST00000348639 ZNF592Q92610 1267 aa22.85■■□□□ 1.25
CHRNA3-202ENST00000348639 ARFGEF1Q9Y6D6 1849 aa22.85■■□□□ 1.25
CHRNA3-202ENST00000348639 KCNJ18B7U540 433 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 USP17L15C9J2P7 530 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 USP17L13C9JLJ4 530 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 USP17L11C9JVI0 530 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 USP17L18D6R9N7 530 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 USP17L22D6RA61 530 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 USP17L17D6RBQ6 530 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 USP17L19D6RCP7 530 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 USP17L20D6RJB6 530 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 TUBB4AP04350 444 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 USP17L24Q0WX57 530 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 KCNJ12Q14500 433 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 USP17L6PQ6QN14 398 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 SV2BQ7L1I2 683 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 HAS1Q92839 578 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 DHTKD1Q96HY7 919 aaPredicted RBP22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 PNMA5Q96PV4 448 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 AMNQ9BXJ7 453 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 BLOC1S4Q9NUP1 217 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 EXOC1Q9NV70 894 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 ITIH6Q6UXX5 1313 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 POTEMA6NI47 508 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 AKR1B15C9JRZ8 316 aaPredicted RBP22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 BMP3P12645 472 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 USP11P51784 963 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 ASIC1P78348 528 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 SYDE2Q5VT97 1194 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 KRT79Q5XKE5 535 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 BTNL9Q6UXG8 535 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 CDK5RAP3Q96JB5 506 aa22.84■■□□□ 1.25
CHRNA3-202ENST00000348639 PPP1R2P41236 205 aa22.83■■□□□ 1.25
CHRNA3-202ENST00000348639 COPB1P53618 953 aaKnown RBP22.83■■□□□ 1.25
CHRNA3-202ENST00000348639 SNAP25P60880 206 aa22.83■■□□□ 1.25
CHRNA3-202ENST00000348639 PDE4DQ08499 809 aa22.83■■□□□ 1.25
CHRNA3-202ENST00000348639 AP3B2Q13367 1082 aa22.83■■□□□ 1.25
CHRNA3-202ENST00000348639 SPDYE2Q495Y8 402 aa22.83■■□□□ 1.25
CHRNA3-202ENST00000348639 MCTP2Q6DN12 878 aa22.83■■□□□ 1.25
CHRNA3-202ENST00000348639 PPFIBP1Q86W92 1011 aa22.83■■□□□ 1.25
CHRNA3-202ENST00000348639 KIF18AQ8NI77 898 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms