RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 ITGA7Q13683 1181 aa11.41□□□□□ -0.58
MRPL55-204ENST00000348259 FSCN1Q16658 493 aaKnown RBP11.41□□□□□ -0.58
MRPL55-204ENST00000348259 MCMDC2Q4G0Z9 681 aa11.41□□□□□ -0.58
MRPL55-204ENST00000348259 ZMYM1Q5SVZ6 1142 aa11.41□□□□□ -0.58
MRPL55-204ENST00000348259 OTOP2Q7RTS6 562 aa11.41□□□□□ -0.58
MRPL55-204ENST00000348259 HSCBQ8IWL3 235 aa11.41□□□□□ -0.58
MRPL55-204ENST00000348259 CPXCR1Q8N123 301 aa11.41□□□□□ -0.58
MRPL55-204ENST00000348259 CEP95Q96GE4 821 aa11.41□□□□□ -0.58
MRPL55-204ENST00000348259 FAM227BQ96M60 508 aa11.41□□□□□ -0.58
MRPL55-204ENST00000348259 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.41□□□□□ -0.58
MRPL55-204ENST00000348259 TRPV6Q9H1D0 765 aa11.41□□□□□ -0.58
MRPL55-204ENST00000348259 SLC28A3Q9HAS3 691 aa11.41□□□□□ -0.58
MRPL55-204ENST00000348259 C11orf16Q9NQ32 467 aa11.41□□□□□ -0.58
MRPL55-204ENST00000348259 MTMR4Q9NYA4 1195 aa11.41□□□□□ -0.58
MRPL55-204ENST00000348259 FEM1BQ9UK73 627 aa11.41□□□□□ -0.58
MRPL55-204ENST00000348259 MTCH2Q9Y6C9 303 aa11.41□□□□□ -0.58
MRPL55-204ENST00000348259 DDX49Q9Y6V7 483 aaKnown RBP11.41□□□□□ -0.58
MRPL55-204ENST00000348259 CCDC171Q6TFL3 1326 aa11.4□□□□□ -0.58
MRPL55-204ENST00000348259 TRIP12Q14669 1992 aaPredicted RBP11.4□□□□□ -0.58
MRPL55-204ENST00000348259 A0A0D9SFI3 127 aa11.4□□□□□ -0.58
MRPL55-204ENST00000348259 FDX1P10109 184 aa11.4□□□□□ -0.58
MRPL55-204ENST00000348259 IGFBP4P22692 258 aa11.4□□□□□ -0.58
MRPL55-204ENST00000348259 MCM2P49736 904 aa11.4□□□□□ -0.58
MRPL55-204ENST00000348259 KCNQ1P51787 676 aa11.4□□□□□ -0.58
MRPL55-204ENST00000348259 CCL23P55773 120 aa11.4□□□□□ -0.58
MRPL55-204ENST00000348259 TNFAIP2Q03169 654 aa11.4□□□□□ -0.58
MRPL55-204ENST00000348259 NECTIN1Q15223 517 aa11.4□□□□□ -0.58
MRPL55-204ENST00000348259 TSGA10IPQ3SY00 556 aa11.4□□□□□ -0.58
MRPL55-204ENST00000348259 ZSCAN25Q6NSZ9 544 aa11.4□□□□□ -0.58
MRPL55-204ENST00000348259 TLK2Q86UE8 772 aa11.4□□□□□ -0.58
MRPL55-204ENST00000348259 AMOTL1Q8IY63 956 aa11.4□□□□□ -0.58
MRPL55-204ENST00000348259 ANKRD35Q8N283 1001 aa11.4□□□□□ -0.58
MRPL55-204ENST00000348259 OSBP2Q969R2 916 aa11.4□□□□□ -0.58
MRPL55-204ENST00000348259 KIFC2Q96AC6 838 aa11.4□□□□□ -0.58
MRPL55-204ENST00000348259 C1QTNF1Q9BXJ1 281 aa11.4□□□□□ -0.58
MRPL55-204ENST00000348259 MTIF3Q9H2K0 278 aaKnown RBP11.4□□□□□ -0.58
MRPL55-204ENST00000348259 ACAD9Q9H845 621 aa11.4□□□□□ -0.58
MRPL55-204ENST00000348259 CLIP2Q9UDT6 1046 aa11.4□□□□□ -0.58
MRPL55-204ENST00000348259 Q9Y3F1 56 aa11.4□□□□□ -0.58
MRPL55-204ENST00000348259 WDFY4Q6ZS81 3184 aa11.4□□□□□ -0.59
MRPL55-204ENST00000348259 TLL1O43897 1013 aa11.39□□□□□ -0.59
MRPL55-204ENST00000348259 ST18O60284 1047 aa11.39□□□□□ -0.59
MRPL55-204ENST00000348259 PLA2G6O60733 806 aa11.39□□□□□ -0.59
MRPL55-204ENST00000348259 TTLL4Q14679 1199 aa11.39□□□□□ -0.59
MRPL55-204ENST00000348259 PPP2R2DQ66LE6 453 aa11.39□□□□□ -0.59
MRPL55-204ENST00000348259 FAM122AQ96E09 287 aa11.39□□□□□ -0.59
MRPL55-204ENST00000348259 LRFN3Q9BTN0 628 aa11.39□□□□□ -0.59
MRPL55-204ENST00000348259 TM6SF1Q9BZW5 370 aa11.39□□□□□ -0.59
MRPL55-204ENST00000348259 ALDH8A1Q9H2A2 487 aaPredicted RBP11.39□□□□□ -0.59
MRPL55-204ENST00000348259 PDGFCQ9NRA1 345 aa11.39□□□□□ -0.59
MRPL55-204ENST00000348259 SLC4A7Q9Y6M7 1214 aa11.39□□□□□ -0.59
MRPL55-204ENST00000348259 RBM47A0AV96 593 aaKnown RBP11.38□□□□□ -0.59
MRPL55-204ENST00000348259 ASB14A6NK59 587 aa11.38□□□□□ -0.59
MRPL55-204ENST00000348259 K7ELQ4 463 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-204ENST00000348259 LPXNO60711 386 aa11.38□□□□□ -0.59
MRPL55-204ENST00000348259 PFKMP08237 780 aa11.38□□□□□ -0.59
MRPL55-204ENST00000348259 BMP3P12645 472 aa11.38□□□□□ -0.59
MRPL55-204ENST00000348259 NOVP48745 357 aa11.38□□□□□ -0.59
MRPL55-204ENST00000348259 SLC4A3P48751 1232 aa11.38□□□□□ -0.59
MRPL55-204ENST00000348259 PSMC6P62333 389 aa11.38□□□□□ -0.59
MRPL55-204ENST00000348259 PTH1RQ03431 593 aa11.38□□□□□ -0.59
MRPL55-204ENST00000348259 IQSEC1Q6DN90 963 aa11.38□□□□□ -0.59
MRPL55-204ENST00000348259 LRRC47Q8N1G4 583 aaKnown RBP11.38□□□□□ -0.59
MRPL55-204ENST00000348259 NEDD1Q8NHV4 660 aa11.38□□□□□ -0.59
MRPL55-204ENST00000348259 KHSRPQ92945 711 aaKnown RBP eCLIP11.38□□□□□ -0.59
MRPL55-204ENST00000348259 VTI1AQ96AJ9 217 aa11.38□□□□□ -0.59
MRPL55-204ENST00000348259 SCLYQ96I15 445 aa11.38□□□□□ -0.59
MRPL55-204ENST00000348259 GMCL1Q96IK5 515 aa11.38□□□□□ -0.59
MRPL55-204ENST00000348259 EPHX3Q9H6B9 360 aa11.38□□□□□ -0.59
MRPL55-204ENST00000348259 RNF146Q9NTX7 359 aa11.38□□□□□ -0.59
MRPL55-204ENST00000348259 SIP14410 1827 aa11.37□□□□□ -0.59
MRPL55-204ENST00000348259 RFXAPO00287 272 aa11.37□□□□□ -0.59
MRPL55-204ENST00000348259 RAD21O60216 631 aa11.37□□□□□ -0.59
MRPL55-204ENST00000348259 TTLL1O95922 423 aa11.37□□□□□ -0.59
MRPL55-204ENST00000348259 CA3P07451 260 aa11.37□□□□□ -0.59
MRPL55-204ENST00000348259 ATP2A2P16615 1042 aaKnown RBP11.37□□□□□ -0.59
MRPL55-204ENST00000348259 TKFCQ3LXA3 575 aa11.37□□□□□ -0.59
MRPL55-204ENST00000348259 DUSP28Q4G0W2 176 aa11.37□□□□□ -0.59
MRPL55-204ENST00000348259 MUM1L1Q5H9M0 696 aa11.37□□□□□ -0.59
MRPL55-204ENST00000348259 RNF20Q5VTR2 975 aa11.37□□□□□ -0.59
MRPL55-204ENST00000348259 SLFN13Q68D06 897 aa11.37□□□□□ -0.59
MRPL55-204ENST00000348259 KRT40Q6A162 431 aa11.37□□□□□ -0.59
MRPL55-204ENST00000348259 FBXO16Q8IX29 292 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-204ENST00000348259 RPUSD2Q8IZ73 545 aaKnown RBP11.37□□□□□ -0.59
MRPL55-204ENST00000348259 APPBP2Q92624 585 aa11.37□□□□□ -0.59
MRPL55-204ENST00000348259 DSCC1Q9BVC3 393 aa11.37□□□□□ -0.59
MRPL55-204ENST00000348259 MKNK2Q9HBH9 465 aa11.37□□□□□ -0.59
MRPL55-204ENST00000348259 CYP39A1Q9NYL5 469 aa11.37□□□□□ -0.59
MRPL55-204ENST00000348259 SNX14Q9Y5W7 946 aa11.37□□□□□ -0.59
MRPL55-204ENST00000348259 U3KPZ7 1027 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-204ENST00000348259 TMEM232C9JQI7 657 aa11.36□□□□□ -0.59
MRPL55-204ENST00000348259 FOXP2O15409 715 aa11.36□□□□□ -0.59
MRPL55-204ENST00000348259 DYNC1LI2O43237 492 aaPredicted RBP11.36□□□□□ -0.59
MRPL55-204ENST00000348259 PRDM1O75626 825 aa11.36□□□□□ -0.59
MRPL55-204ENST00000348259 STAT2P52630 851 aa11.36□□□□□ -0.59
MRPL55-204ENST00000348259 PURAQ00577 322 aaKnown RBP11.36□□□□□ -0.59
MRPL55-204ENST00000348259 TAP1Q03518 808 aa11.36□□□□□ -0.59
MRPL55-204ENST00000348259 GPNMBQ14956 572 aa11.36□□□□□ -0.59
MRPL55-204ENST00000348259 AAK1Q2M2I8 961 aa11.36□□□□□ -0.59
MRPL55-204ENST00000348259 RASGRP2Q7LDG7 609 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms