RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 KRT31Q15323 416 aa19.06■□□□□ 0.64
SPAST-202ENST00000345662 UIMC1Q96RL1 719 aa19.06■□□□□ 0.64
SPAST-202ENST00000345662 PLAAQ9Y263 795 aa19.06■□□□□ 0.64
SPAST-202ENST00000345662 PTPN22Q9Y2R2 807 aa19.06■□□□□ 0.64
SPAST-202ENST00000345662 FMO2Q99518 471 aa19.06■□□□□ 0.64
SPAST-202ENST00000345662 ST7Q9NRC1 585 aa19.06■□□□□ 0.64
SPAST-202ENST00000345662 ATP8A2Q9NTI2 1148 aa19.06■□□□□ 0.64
SPAST-202ENST00000345662 DNAJC5BQ9UF47 199 aa19.06■□□□□ 0.64
SPAST-202ENST00000345662 LAD1O00515 517 aa19.06■□□□□ 0.64
SPAST-202ENST00000345662 KIF11P52732 1056 aa19.06■□□□□ 0.64
SPAST-202ENST00000345662 PCDHA12Q9UN75 941 aa19.06■□□□□ 0.64
SPAST-202ENST00000345662 ANO9A1A5B4 782 aa19.06■□□□□ 0.64
SPAST-202ENST00000345662 USP17L12C9JPN9 530 aa19.06■□□□□ 0.64
SPAST-202ENST00000345662 USP17L21D6R901 530 aa19.06■□□□□ 0.64
SPAST-202ENST00000345662 POC1B-GALNT4F8VUJ3 575 aa19.06■□□□□ 0.64
SPAST-202ENST00000345662 RASGRF2O14827 1237 aa19.06■□□□□ 0.64
SPAST-202ENST00000345662 N4BP1O75113 896 aaKnown RBP19.06■□□□□ 0.64
SPAST-202ENST00000345662 STRN3Q13033 797 aa19.06■□□□□ 0.64
SPAST-202ENST00000345662 UBE3CQ15386 1083 aa19.06■□□□□ 0.64
SPAST-202ENST00000345662 TUBB6Q9BUF5 446 aa19.06■□□□□ 0.64
SPAST-202ENST00000345662 ABCC12Q96J65 1359 aa19.05■□□□□ 0.64
SPAST-202ENST00000345662 TMEM232C9JQI7 657 aa19.05■□□□□ 0.64
SPAST-202ENST00000345662 ADAMTS2O95450 1211 aa19.05■□□□□ 0.64
SPAST-202ENST00000345662 TCP11X2Q5H9J9 407 aa19.05■□□□□ 0.64
SPAST-202ENST00000345662 NCAPGQ9BPX3 1015 aa19.05■□□□□ 0.64
SPAST-202ENST00000345662 MAST3O60307 1309 aa19.05■□□□□ 0.64
SPAST-202ENST00000345662 ERVK-7P63135 1459 aa19.05■□□□□ 0.64
SPAST-202ENST00000345662 MAP3K7O43318 606 aa19.05■□□□□ 0.64
SPAST-202ENST00000345662 DBN1Q16643 649 aa19.05■□□□□ 0.64
SPAST-202ENST00000345662 KIF2CQ99661 725 aa19.05■□□□□ 0.64
SPAST-202ENST00000345662 ZC3H12CQ9C0D7 883 aaKnown RBP19.05■□□□□ 0.64
SPAST-202ENST00000345662 SART1O43290 800 aaKnown RBP19.05■□□□□ 0.64
SPAST-202ENST00000345662 HSPA6P17066 643 aa19.05■□□□□ 0.64
SPAST-202ENST00000345662 CTIFO43310 598 aaKnown RBP19.05■□□□□ 0.64
SPAST-202ENST00000345662 KCNQ3O43525 872 aa19.05■□□□□ 0.64
SPAST-202ENST00000345662 GABPB2Q8TAK5 448 aaPredicted RBP19.05■□□□□ 0.64
SPAST-202ENST00000345662 GPR108Q9NPR9 543 aa19.05■□□□□ 0.64
SPAST-202ENST00000345662 SLCO1A2P46721 670 aa19.04■□□□□ 0.64
SPAST-202ENST00000345662 SP4Q02446 784 aa19.04■□□□□ 0.64
SPAST-202ENST00000345662 ADAMTS12P58397 1594 aa19.04■□□□□ 0.64
SPAST-202ENST00000345662 C6orf118Q5T5N4 469 aa19.04■□□□□ 0.64
SPAST-202ENST00000345662 FMR1NBQ8N0W7 255 aaPredicted RBP19.04■□□□□ 0.64
SPAST-202ENST00000345662 MB21D1Q8N884 522 aa19.04■□□□□ 0.64
SPAST-202ENST00000345662 PAGE5Q96GU1 130 aa19.04■□□□□ 0.64
SPAST-202ENST00000345662 GOLPH3LQ9H4A5 285 aa19.04■□□□□ 0.64
SPAST-202ENST00000345662 GPKOWQ92917 476 aaPredicted RBP eCLIP19.04■□□□□ 0.64
SPAST-202ENST00000345662 MRPS9P82933 396 aaKnown RBP19.04■□□□□ 0.64
SPAST-202ENST00000345662 ACTN3Q08043 901 aaPredicted RBP19.04■□□□□ 0.64
SPAST-202ENST00000345662 C10orf76Q5T2E6 689 aa19.04■□□□□ 0.64
SPAST-202ENST00000345662 RESP18Q5W5W9 173 aa19.04■□□□□ 0.64
SPAST-202ENST00000345662 OGFOD1Q8N543 542 aa19.04■□□□□ 0.64
SPAST-202ENST00000345662 AK8Q96MA6 479 aa19.04■□□□□ 0.64
SPAST-202ENST00000345662 ELAC2Q9BQ52 826 aaKnown RBP19.04■□□□□ 0.64
SPAST-202ENST00000345662 ZMYND12Q9H0C1 365 aa19.04■□□□□ 0.64
SPAST-202ENST00000345662 ZNF148Q9UQR1 794 aa19.04■□□□□ 0.64
SPAST-202ENST00000345662 CCNE1P24864 410 aa19.03■□□□□ 0.64
SPAST-202ENST00000345662 DHX40Q8IX18 779 aaKnown RBP19.03■□□□□ 0.64
SPAST-202ENST00000345662 PNMA1Q8ND90 353 aa19.03■□□□□ 0.64
SPAST-202ENST00000345662 ABHD10Q9NUJ1 306 aa19.03■□□□□ 0.64
SPAST-202ENST00000345662 ASXL2Q76L83 1435 aa19.03■□□□□ 0.64
SPAST-202ENST00000345662 ADCY1Q08828 1119 aa19.03■□□□□ 0.64
SPAST-202ENST00000345662 SLC1A4P43007 532 aa19.03■□□□□ 0.64
SPAST-202ENST00000345662 ARHGAP4P98171 946 aa19.03■□□□□ 0.64
SPAST-202ENST00000345662 ADCY2Q08462 1091 aa19.03■□□□□ 0.64
SPAST-202ENST00000345662 MESDQ14696 234 aa19.03■□□□□ 0.64
SPAST-202ENST00000345662 IWS1Q96ST2 819 aa19.03■□□□□ 0.64
SPAST-202ENST00000345662 LOC102724159A0A0B4J2E5 919 aa19.03■□□□□ 0.64
SPAST-202ENST00000345662 SRGAP2O75044 1071 aa19.03■□□□□ 0.64
SPAST-202ENST00000345662 ATF7P17544 494 aaPredicted RBP19.03■□□□□ 0.64
SPAST-202ENST00000345662 PDE6CP51160 858 aa19.03■□□□□ 0.64
SPAST-202ENST00000345662 LMNB2Q03252 620 aa19.03■□□□□ 0.64
SPAST-202ENST00000345662 PWP2Q15269 919 aaKnown RBP19.03■□□□□ 0.64
SPAST-202ENST00000345662 LRRC24Q50LG9 513 aa19.03■□□□□ 0.64
SPAST-202ENST00000345662 ADGRG1Q9Y653 693 aa19.03■□□□□ 0.64
SPAST-202ENST00000345662 FKBP3Q00688 224 aaKnown RBP19.02■□□□□ 0.64
SPAST-202ENST00000345662 NR5A1Q13285 461 aa19.02■□□□□ 0.64
SPAST-202ENST00000345662 TOB2Q14106 344 aaPredicted RBP19.02■□□□□ 0.64
SPAST-202ENST00000345662 RCN2Q14257 317 aa19.02■□□□□ 0.64
SPAST-202ENST00000345662 ARMCX5Q6P1M9 558 aa19.02■□□□□ 0.64
SPAST-202ENST00000345662 PFDN4Q9NQP4 134 aa19.02■□□□□ 0.64
SPAST-202ENST00000345662 TRIM66O15016 1216 aa19.02■□□□□ 0.64
SPAST-202ENST00000345662 DKC1O60832 514 aaKnown RBP eCLIP19.02■□□□□ 0.64
SPAST-202ENST00000345662 ECEL1O95672 775 aa19.02■□□□□ 0.64
SPAST-202ENST00000345662 SERPING1P05155 500 aa19.02■□□□□ 0.64
SPAST-202ENST00000345662 IFNAR1P17181 557 aa19.02■□□□□ 0.64
SPAST-202ENST00000345662 NBPF10Q6P3W6 841 aaKnown RBP19.02■□□□□ 0.64
SPAST-202ENST00000345662 GMNCA6NCL1 334 aa19.02■□□□□ 0.64
SPAST-202ENST00000345662 CD19P15391 556 aa19.02■□□□□ 0.64
SPAST-202ENST00000345662 KCNJ6P48051 423 aa19.02■□□□□ 0.64
SPAST-202ENST00000345662 CCDC93Q567U6 631 aa19.02■□□□□ 0.64
SPAST-202ENST00000345662 NUGGCQ68CJ6 796 aa19.02■□□□□ 0.64
SPAST-202ENST00000345662 TPH2Q8IWU9 490 aa19.02■□□□□ 0.64
SPAST-202ENST00000345662 LARP4BQ92615 738 aaKnown RBP19.02■□□□□ 0.64
SPAST-202ENST00000345662 MMEP08473 750 aa19.02■□□□□ 0.63
SPAST-202ENST00000345662 USP14P54578 494 aa19.02■□□□□ 0.63
SPAST-202ENST00000345662 ZBTB17Q13105 803 aa19.02■□□□□ 0.63
SPAST-202ENST00000345662 PARP9Q8IXQ6 854 aa19.02■□□□□ 0.63
SPAST-202ENST00000345662 ACSBG1Q96GR2 724 aa19.02■□□□□ 0.63
SPAST-202ENST00000345662 ANGPTL2Q9UKU9 493 aa19.02■□□□□ 0.63
SPAST-202ENST00000345662 CLASP1Q7Z460 1538 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms