RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 VAV2P52735 878 aa25.79■■□□□ 1.72
NKX2-3-201ENST00000344586 KRT25Q7Z3Z0 450 aa25.79■■□□□ 1.72
NKX2-3-201ENST00000344586 COL24A1Q17RW2 1714 aa25.79■■□□□ 1.72
NKX2-3-201ENST00000344586 MACROD2A1Z1Q3 448 aa25.79■■□□□ 1.72
NKX2-3-201ENST00000344586 CCNT1O60563 726 aaKnown RBP25.79■■□□□ 1.72
NKX2-3-201ENST00000344586 LETM2Q2VYF4 491 aa25.79■■□□□ 1.72
NKX2-3-201ENST00000344586 KIAA0895Q8NCT3 520 aa25.79■■□□□ 1.72
NKX2-3-201ENST00000344586 NUTM2BA6NNL0 878 aaPredicted RBP25.78■■□□□ 1.72
NKX2-3-201ENST00000344586 NUTM2EB1AL46 878 aaPredicted RBP25.78■■□□□ 1.72
NKX2-3-201ENST00000344586 PRPF6O94906 941 aaKnown RBP25.78■■□□□ 1.72
NKX2-3-201ENST00000344586 IVLP07476 585 aa25.78■■□□□ 1.72
NKX2-3-201ENST00000344586 IDEP14735 1019 aa25.78■■□□□ 1.72
NKX2-3-201ENST00000344586 PPP1R2P41236 205 aa25.78■■□□□ 1.72
NKX2-3-201ENST00000344586 NONOQ15233 471 aaKnown RBP eCLIP25.78■■□□□ 1.72
NKX2-3-201ENST00000344586 COBLL1Q53SF7 1204 aa25.78■■□□□ 1.72
NKX2-3-201ENST00000344586 CAGE1Q8TC20 777 aa25.78■■□□□ 1.72
NKX2-3-201ENST00000344586 COG1Q8WTW3 980 aa25.78■■□□□ 1.72
NKX2-3-201ENST00000344586 NLRP3Q96P20 1036 aa25.78■■□□□ 1.72
NKX2-3-201ENST00000344586 LZTS2Q9BRK4 669 aa25.78■■□□□ 1.72
NKX2-3-201ENST00000344586 MMTAG2Q9BU76 263 aaKnown RBP25.78■■□□□ 1.72
NKX2-3-201ENST00000344586 CPVLQ9H3G5 476 aa25.78■■□□□ 1.72
NKX2-3-201ENST00000344586 STX8Q9UNK0 236 aa25.78■■□□□ 1.72
NKX2-3-201ENST00000344586 NAPAP54920 295 aa25.78■■□□□ 1.72
NKX2-3-201ENST00000344586 SECISBP2LQ93073 1101 aaKnown RBP25.78■■□□□ 1.72
NKX2-3-201ENST00000344586 HPS3Q969F9 1004 aa25.78■■□□□ 1.72
NKX2-3-201ENST00000344586 SPZ1Q9BXG8 430 aa25.78■■□□□ 1.72
NKX2-3-201ENST00000344586 SEMA6BQ9H3T3 888 aa25.78■■□□□ 1.72
NKX2-3-201ENST00000344586 LRWD1Q9UFC0 647 aa25.78■■□□□ 1.72
NKX2-3-201ENST00000344586 SBF2Q86WG5 1849 aa25.77■■□□□ 1.72
NKX2-3-201ENST00000344586 KLRF2D3W0D1 207 aa25.77■■□□□ 1.72
NKX2-3-201ENST00000344586 ZMYND10O75800 440 aa25.77■■□□□ 1.72
NKX2-3-201ENST00000344586 PLEKP08567 350 aaPredicted RBP25.77■■□□□ 1.72
NKX2-3-201ENST00000344586 MYBL2P10244 700 aa25.77■■□□□ 1.72
NKX2-3-201ENST00000344586 RASA1P20936 1047 aa25.77■■□□□ 1.72
NKX2-3-201ENST00000344586 SRLQ86TD4 932 aa25.77■■□□□ 1.72
NKX2-3-201ENST00000344586 GSPT2Q8IYD1 628 aaKnown RBP25.77■■□□□ 1.72
NKX2-3-201ENST00000344586 TSGA10Q9BZW7 698 aa25.77■■□□□ 1.72
NKX2-3-201ENST00000344586 NYXQ9GZU5 481 aa25.77■■□□□ 1.72
NKX2-3-201ENST00000344586 SNED1Q8TER0 1413 aa25.77■■□□□ 1.72
NKX2-3-201ENST00000344586 LDHBP07195 334 aaKnown RBP25.76■■□□□ 1.71
NKX2-3-201ENST00000344586 KCNQ4P56696 695 aa25.76■■□□□ 1.71
NKX2-3-201ENST00000344586 C2orf54Q08AI8 447 aa25.76■■□□□ 1.71
NKX2-3-201ENST00000344586 KIF5AQ12840 1032 aa25.76■■□□□ 1.71
NKX2-3-201ENST00000344586 FKBP15Q5T1M5 1219 aa25.76■■□□□ 1.71
NKX2-3-201ENST00000344586 ZNF444Q8N0Y2 327 aaPredicted RBP25.76■■□□□ 1.71
NKX2-3-201ENST00000344586 MYO1CO00159 1063 aa25.76■■□□□ 1.71
NKX2-3-201ENST00000344586 RGL2O15211 777 aa25.76■■□□□ 1.71
NKX2-3-201ENST00000344586 HNRNPH3P31942 346 aaKnown RBP25.76■■□□□ 1.71
NKX2-3-201ENST00000344586 TECP42680 631 aa25.76■■□□□ 1.71
NKX2-3-201ENST00000344586 DIXDC1Q155Q3 683 aa25.76■■□□□ 1.71
NKX2-3-201ENST00000344586 CNNM4Q6P4Q7 775 aa25.76■■□□□ 1.71
NKX2-3-201ENST00000344586 KRT26Q7Z3Y9 468 aa25.76■■□□□ 1.71
NKX2-3-201ENST00000344586 CCDC24Q8N4L8 307 aa25.76■■□□□ 1.71
NKX2-3-201ENST00000344586 JADE2Q9NQC1 790 aa25.76■■□□□ 1.71
NKX2-3-201ENST00000344586 FOXR1Q6PIV2 292 aa25.75■■□□□ 1.71
NKX2-3-201ENST00000344586 NEK8Q86SG6 692 aa25.75■■□□□ 1.71
NKX2-3-201ENST00000344586 AMOTL1Q8IY63 956 aa25.75■■□□□ 1.71
NKX2-3-201ENST00000344586 FNBP4Q8N3X1 1017 aaPredicted RBP25.75■■□□□ 1.71
NKX2-3-201ENST00000344586 CCDC42Q96M95 316 aa25.75■■□□□ 1.71
NKX2-3-201ENST00000344586 SIK3Q9Y2K2 1263 aa25.75■■□□□ 1.71
NKX2-3-201ENST00000344586 RRP15Q9Y3B9 282 aaKnown RBP25.75■■□□□ 1.71
NKX2-3-201ENST00000344586 SMCO2A6NFE2 343 aa25.75■■□□□ 1.71
NKX2-3-201ENST00000344586 EPHB6O15197 1021 aa25.75■■□□□ 1.71
NKX2-3-201ENST00000344586 GRIK5Q16478 980 aa25.75■■□□□ 1.71
NKX2-3-201ENST00000344586 CCNI2Q6ZMN8 369 aaPredicted RBP25.75■■□□□ 1.71
NKX2-3-201ENST00000344586 SMCR8Q8TEV9 937 aaPredicted RBP25.75■■□□□ 1.71
NKX2-3-201ENST00000344586 TGFBRAP1Q8WUH2 860 aa25.75■■□□□ 1.71
NKX2-3-201ENST00000344586 SNX12Q9UMY4 172 aa25.75■■□□□ 1.71
NKX2-3-201ENST00000344586 CAPN6Q9Y6Q1 641 aa25.75■■□□□ 1.71
NKX2-3-201ENST00000344586 AMPD3Q01432 767 aa25.74■■□□□ 1.71
NKX2-3-201ENST00000344586 SPA17Q15506 151 aa25.74■■□□□ 1.71
NKX2-3-201ENST00000344586 CCDC96Q2M329 555 aa25.74■■□□□ 1.71
NKX2-3-201ENST00000344586 CENPPQ6IPU0 288 aa25.74■■□□□ 1.71
NKX2-3-201ENST00000344586 NBPF5PQ86XG9 351 aaPredicted RBP25.74■■□□□ 1.71
NKX2-3-201ENST00000344586 IQCDQ96DY2 449 aa25.74■■□□□ 1.71
NKX2-3-201ENST00000344586 GDAP1L1Q96MZ0 367 aa25.74■■□□□ 1.71
NKX2-3-201ENST00000344586 SELENOOQ9BVL4 669 aa25.74■■□□□ 1.71
NKX2-3-201ENST00000344586 SH2D4AQ9H788 454 aa25.74■■□□□ 1.71
NKX2-3-201ENST00000344586 ARHGAP20Q9P2F6 1191 aa25.74■■□□□ 1.71
NKX2-3-201ENST00000344586 SAP30BPQ9UHR5 308 aaKnown RBP25.74■■□□□ 1.71
NKX2-3-201ENST00000344586 PLAGL2Q9UPG8 496 aa25.74■■□□□ 1.71
NKX2-3-201ENST00000344586 AHDC1Q5TGY3 1603 aaPredicted RBP25.74■■□□□ 1.71
NKX2-3-201ENST00000344586 IQCEQ6IPM2 695 aa25.73■■□□□ 1.71
NKX2-3-201ENST00000344586 LRRC31Q6UY01 552 aa25.73■■□□□ 1.71
NKX2-3-201ENST00000344586 SLC51AQ86UW1 340 aa25.73■■□□□ 1.71
NKX2-3-201ENST00000344586 AFAP1L1Q8TED9 768 aa25.73■■□□□ 1.71
NKX2-3-201ENST00000344586 C6orf50Q9HD87 102 aa25.73■■□□□ 1.71
NKX2-3-201ENST00000344586 SLC39A2Q9NP94 309 aa25.73■■□□□ 1.71
NKX2-3-201ENST00000344586 CNTNAP4Q9C0A0 1308 aa25.73■■□□□ 1.71
NKX2-3-201ENST00000344586 A0A0U1RQG5 324 aaPredicted RBP25.73■■□□□ 1.71
NKX2-3-201ENST00000344586 TM4SF1P30408 202 aa25.73■■□□□ 1.71
NKX2-3-201ENST00000344586 VWA3BQ502W6 1294 aa25.73■■□□□ 1.71
NKX2-3-201ENST00000344586 POTEDQ86YR6 584 aa25.73■■□□□ 1.71
NKX2-3-201ENST00000344586 CREG2Q8IUH2 290 aa25.73■■□□□ 1.71
NKX2-3-201ENST00000344586 TRIM58Q8NG06 486 aa25.73■■□□□ 1.71
NKX2-3-201ENST00000344586 SRP68Q9UHB9 627 aaKnown RBP25.73■■□□□ 1.71
NKX2-3-201ENST00000344586 JRKLQ9Y4A0 524 aa25.73■■□□□ 1.71
NKX2-3-201ENST00000344586 DDX60LQ5H9U9 1706 aaKnown RBP25.72■■□□□ 1.71
NKX2-3-201ENST00000344586 TRIM66O15016 1216 aa25.72■■□□□ 1.71
NKX2-3-201ENST00000344586 PPP4CP60510 307 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms