RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 CCNL1Q9UK58 526 aaPredicted RBP12□□□□□ -0.49
RPL28-201ENST00000344063 TBC1D8O95759 1140 aa12□□□□□ -0.49
RPL28-201ENST00000344063 INTS8Q75QN2 995 aaKnown RBP12□□□□□ -0.49
RPL28-201ENST00000344063 P2RX5Q93086 422 aa12□□□□□ -0.49
RPL28-201ENST00000344063 ZNF219Q9P2Y4 722 aaPredicted RBP12□□□□□ -0.49
RPL28-201ENST00000344063 PARP3Q9Y6F1 533 aa12□□□□□ -0.49
RPL28-201ENST00000344063 CRKLP46109 303 aaKnown RBP11.99□□□□□ -0.49
RPL28-201ENST00000344063 SEL1L2Q5TEA6 688 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 GKAP1Q5VSY0 366 aaPredicted RBP11.99□□□□□ -0.49
RPL28-201ENST00000344063 SHC4Q6S5L8 630 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 ANKRD42Q8N9B4 389 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 PIGBQ92521 554 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 UTP11Q9Y3A2 253 aaKnown RBP11.99□□□□□ -0.49
RPL28-201ENST00000344063 NEDD4P46934 1319 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 NBPF26B4DH59 902 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 NDUFA10O95299 355 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 H2AFXP16104 143 aaPredicted RBP11.99□□□□□ -0.49
RPL28-201ENST00000344063 CDC27P30260 824 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 DYNLL1P63167 89 aaKnown RBP11.99□□□□□ -0.49
RPL28-201ENST00000344063 EHHADHQ08426 723 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 NAA35Q5VZE5 725 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 NBPF10Q6P3W6 841 aaKnown RBP11.99□□□□□ -0.49
RPL28-201ENST00000344063 CROCCP2Q86T23 111 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 NBPF15Q8N660 670 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 BICD1Q96G01 975 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 RIMBP2O15034 1052 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 HEXIM1O94992 359 aaKnown RBP11.99□□□□□ -0.49
RPL28-201ENST00000344063 MTMR3Q13615 1198 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 ADGRG1Q9Y653 693 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 KIF28PB7ZC32 967 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 SLC1A4P43007 532 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 RFX5P48382 616 aaPredicted RBP11.99□□□□□ -0.49
RPL28-201ENST00000344063 ZBED6P86452 979 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 RASSF7Q02833 373 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 KRT31Q15323 416 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 VSIG1Q86XK7 387 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 LSM14BQ9BX40 385 aaKnown RBP11.99□□□□□ -0.49
RPL28-201ENST00000344063 THAP9Q9H5L6 903 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 MRPL44Q9H9J2 332 aaKnown RBP11.99□□□□□ -0.49
RPL28-201ENST00000344063 SLC39A2Q9NP94 309 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.99□□□□□ -0.49
RPL28-201ENST00000344063 SWAP70Q9UH65 585 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 SPATA31A3Q5VYP0 1347 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 UBN2Q6ZU65 1347 aa11.99□□□□□ -0.49
RPL28-201ENST00000344063 CEP170BQ9Y4F5 1589 aaPredicted RBP11.99□□□□□ -0.49
RPL28-201ENST00000344063 MAP3K9P80192 1104 aa11.98□□□□□ -0.49
RPL28-201ENST00000344063 MXRA7P84157 204 aa11.98□□□□□ -0.49
RPL28-201ENST00000344063 CLUL1Q15846 466 aa11.98□□□□□ -0.49
RPL28-201ENST00000344063 PEX26Q7Z412 305 aa11.98□□□□□ -0.49
RPL28-201ENST00000344063 LMTK3Q96Q04 1460 aa11.98□□□□□ -0.49
RPL28-201ENST00000344063 CCNE1P24864 410 aa11.98□□□□□ -0.49
RPL28-201ENST00000344063 SETDB1Q15047 1291 aa11.98□□□□□ -0.49
RPL28-201ENST00000344063 FAM26FQ5R3K3 315 aa11.98□□□□□ -0.49
RPL28-201ENST00000344063 NCAPGQ9BPX3 1015 aa11.98□□□□□ -0.49
RPL28-201ENST00000344063 BRIP1Q9BX63 1249 aa11.98□□□□□ -0.49
RPL28-201ENST00000344063 CPDO75976 1380 aa11.98□□□□□ -0.49
RPL28-201ENST00000344063 MOCS3O95396 460 aa11.98□□□□□ -0.49
RPL28-201ENST00000344063 HIBCHQ6NVY1 386 aaPredicted RBP11.98□□□□□ -0.49
RPL28-201ENST00000344063 RBM43Q6ZSC3 357 aaKnown RBP11.98□□□□□ -0.49
RPL28-201ENST00000344063 IFT74Q96LB3 600 aa11.98□□□□□ -0.49
RPL28-201ENST00000344063 PCDHA12Q9UN75 941 aa11.98□□□□□ -0.49
RPL28-201ENST00000344063 ATP6V0A2Q9Y487 856 aa11.98□□□□□ -0.49
RPL28-201ENST00000344063 EIF4E1BA6NMX2 242 aaKnown RBP11.98□□□□□ -0.49
RPL28-201ENST00000344063 PRR29P0C7W0 189 aa11.98□□□□□ -0.49
RPL28-201ENST00000344063 HOXA7P31268 230 aaPredicted RBP11.98□□□□□ -0.49
RPL28-201ENST00000344063 APBA1Q02410 837 aa11.98□□□□□ -0.49
RPL28-201ENST00000344063 FNBP4Q8N3X1 1017 aaPredicted RBP11.98□□□□□ -0.49
RPL28-201ENST00000344063 ZNF804BA4D1E1 1349 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 TMTC3Q6ZXV5 915 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 GOLGA8HP0CJ92 632 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 SCARF1Q14162 830 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 HLFQ16534 295 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 TCP11X2Q5H9J9 407 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 ENGASEQ8NFI3 743 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 LCMT1Q9UIC8 334 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 DIP2AQ14689 1571 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 EPHB4P54760 987 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 UBL4BQ8N7F7 174 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 RASGRP4Q8TDF6 673 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 STK17AQ9UEE5 414 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 ARMCX3Q9UH62 379 aaPredicted RBP11.97□□□□□ -0.49
RPL28-201ENST00000344063 TUBE1Q9UJT0 475 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 HDAC9Q9UKV0 1011 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 ESYT3A0FGR9 886 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 ATP2A1O14983 1001 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 PDIA6Q15084 440 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 MAN2A1Q16706 1144 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 GPBP1Q86WP2 473 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 CCDC24Q8N4L8 307 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 CCDC63Q8NA47 563 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 L2HGDHQ9H9P8 463 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 NFU1Q9UMS0 254 aa11.97□□□□□ -0.49
RPL28-201ENST00000344063 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.97□□□□□ -0.49
RPL28-201ENST00000344063 CTDNEP1O95476 244 aa11.96□□□□□ -0.49
RPL28-201ENST00000344063 XRCC5P13010 732 aaKnown RBP11.96□□□□□ -0.49
RPL28-201ENST00000344063 NR1D1P20393 614 aa11.96□□□□□ -0.49
RPL28-201ENST00000344063 MFSD14BQ5SR56 506 aa11.96□□□□□ -0.49
RPL28-201ENST00000344063 LMNTD2Q8IXW0 634 aa11.96□□□□□ -0.49
RPL28-201ENST00000344063 LARP4BQ92615 738 aaKnown RBP11.96□□□□□ -0.49
RPL28-201ENST00000344063 NKIRAS1Q9NYS0 192 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms